RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 ATXN7L1Q9ULK2 861 aaPredicted RBP10.81□□□□□ -0.68
PDE6C-201ENST00000371447 BOLA1Q9Y3E2 137 aa10.81□□□□□ -0.68
PDE6C-201ENST00000371447 V9GYH0 126 aa10.81□□□□□ -0.68
PDE6C-201ENST00000371447 CPED1A4D0V7 1026 aa10.81□□□□□ -0.68
PDE6C-201ENST00000371447 HLA-DPB1P04440 258 aa10.81□□□□□ -0.68
PDE6C-201ENST00000371447 THBS1P07996 1170 aa10.81□□□□□ -0.68
PDE6C-201ENST00000371447 PEPDP12955 493 aa10.81□□□□□ -0.68
PDE6C-201ENST00000371447 S1PR1P21453 382 aa10.81□□□□□ -0.68
PDE6C-201ENST00000371447 BCKDHBP21953 392 aa10.81□□□□□ -0.68
PDE6C-201ENST00000371447 CAPZBP47756 277 aa10.81□□□□□ -0.68
PDE6C-201ENST00000371447 TDGQ13569 410 aa10.81□□□□□ -0.68
PDE6C-201ENST00000371447 AGAP7PQ5VUJ5 663 aa10.81□□□□□ -0.68
PDE6C-201ENST00000371447 TUBA3EQ6PEY2 450 aa10.81□□□□□ -0.68
PDE6C-201ENST00000371447 C19orf48Q6RUI8 117 aa10.81□□□□□ -0.68
PDE6C-201ENST00000371447 ESPNLQ6ZVH7 1005 aa10.81□□□□□ -0.68
PDE6C-201ENST00000371447 ZNF511Q8NB15 262 aa10.81□□□□□ -0.68
PDE6C-201ENST00000371447 OR5W2Q8NH69 310 aa10.81□□□□□ -0.68
PDE6C-201ENST00000371447 ZNRF4Q8WWF5 429 aa10.81□□□□□ -0.68
PDE6C-201ENST00000371447 PDCD1LG2Q9BQ51 273 aa10.81□□□□□ -0.68
PDE6C-201ENST00000371447 NXF5Q9H1B4 397 aaKnown RBP10.81□□□□□ -0.68
PDE6C-201ENST00000371447 IRF2BPLQ9H1B7 796 aa10.81□□□□□ -0.68
PDE6C-201ENST00000371447 GTF2A1LQ9UNN4 478 aa10.81□□□□□ -0.68
PDE6C-201ENST00000371447 A0A087WV48 116 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 TMEM129A0AVI4 362 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 BHLHE40O14503 412 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 SCO2O43819 266 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 RAD1O60671 282 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 GPANK1O95872 356 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 CT45A8P0DMV1 189 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 CT45A9P0DMV2 189 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 PSKH1P11801 424 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 ZNF3P17036 446 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 AHCYP23526 432 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 RCVRNP35243 200 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 AQP2P41181 271 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 NSDHLQ15738 373 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 CT45A2Q5DJT8 189 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 MOSPD2Q8NHP6 518 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 SNX33Q8WV41 574 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 FGF20Q9NP95 211 aaPredicted RBP10.8□□□□□ -0.68
PDE6C-201ENST00000371447 BABAM2Q9NXR7 383 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 ZNF223Q9UK11 482 aaPredicted RBP10.8□□□□□ -0.68
PDE6C-201ENST00000371447 ING1Q9UK53 422 aaPredicted RBP10.8□□□□□ -0.68
PDE6C-201ENST00000371447 DENND4AQ7Z401 1863 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 TVP23AA6NH52 213 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 ELOA3DA6NLF2 546 aaPredicted RBP10.8□□□□□ -0.68
PDE6C-201ENST00000371447 CHURC1-FNTBB4DL54 471 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 MBTPS2O43462 519 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 HCRTR2O43614 444 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 SELENOFO60613 162 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 HCN1O60741 890 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 CTNSO60931 367 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 GABRA5P31644 462 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 ACAA2P42765 397 aaKnown RBP10.8□□□□□ -0.68
PDE6C-201ENST00000371447 FNTBP49356 437 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 NR0B1P51843 470 aaKnown RBP10.8□□□□□ -0.68
PDE6C-201ENST00000371447 ELOA3BQ3SY89 546 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 TRIQKQ629K1 86 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 KRT74Q7RTS7 529 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 GKN2Q86XP6 184 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 IZUMO1Q8IYV9 350 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 SLC7A5P1Q8MH63 180 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 Q8N402 240 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 ZNF433Q8N7K0 673 aaPredicted RBP10.8□□□□□ -0.68
PDE6C-201ENST00000371447 C19orf18Q8NEA5 215 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 ELOA3Q8NG57 546 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 FGF11Q92914 225 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 ZFP3Q96NJ6 502 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 NKX3-1Q99801 234 aaPredicted RBP10.8□□□□□ -0.68
PDE6C-201ENST00000371447 NXF2Q9GZY0 626 aaKnown RBP10.8□□□□□ -0.68
PDE6C-201ENST00000371447 ASB6Q9NWX5 421 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 MKL2Q9ULH7 1088 aa10.8□□□□□ -0.68
PDE6C-201ENST00000371447 A0A087WV62 115 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 A6NL46 340 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 KLF4O43474 513 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 CDC40O60508 579 aaKnown RBP eCLIP10.79□□□□□ -0.68
PDE6C-201ENST00000371447 NKX2-2O95096 273 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 OPN1LWP04000 364 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 TPBGQ13641 420 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 SMAD2Q15796 467 aaKnown RBP10.79□□□□□ -0.68
PDE6C-201ENST00000371447 HYAL4Q2M3T9 481 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 QSOX2Q6ZRP7 698 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 SAMD12Q8N8I0 201 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 CEP76Q8TAP6 659 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 DACT3Q96B18 629 aaPredicted RBP10.79□□□□□ -0.68
PDE6C-201ENST00000371447 CTHRC1Q96CG8 243 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 Q96M85 177 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 VSTM2LQ96N03 204 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 STACQ99469 402 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 C11orf54Q9H0W9 315 aaPredicted RBP10.79□□□□□ -0.68
PDE6C-201ENST00000371447 MKKSQ9NPJ1 570 aaPredicted RBP10.79□□□□□ -0.68
PDE6C-201ENST00000371447 RPRD1BQ9NQG5 326 aaKnown RBP10.79□□□□□ -0.68
PDE6C-201ENST00000371447 SF3B6Q9Y3B4 125 aaKnown RBP10.79□□□□□ -0.68
PDE6C-201ENST00000371447 KNTC1P50748 2209 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 A0A0B4J2E0 115 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 A0A1B0GX12 115 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 HK1P19367 917 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 PAMR1Q6UXH9 720 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 APOOLQ6UXV4 268 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 RTL4Q6ZR62 310 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms