RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 NRSN2Q9GZP1 204 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 TSPAN10Q9H1Z9 355 aaPredicted RBP7.97□□□□□ -1.13
ABCA4-201ENST00000370225 OR52D1Q9H346 318 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 UBE2ZQ9H832 354 aaPredicted RBP7.97□□□□□ -1.13
ABCA4-201ENST00000370225 RAB9BQ9NP90 201 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 INTS6Q9UL03 887 aaKnown RBP7.97□□□□□ -1.13
ABCA4-201ENST00000370225 TRAPPC2LQ9UL33 140 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 SOCS6O14544 535 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 SNNO75324 88 aaPredicted RBP7.97□□□□□ -1.13
ABCA4-201ENST00000370225 SERPINA7P05543 415 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 PTPN6P29350 595 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 AGTR1P30556 359 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 HOXC13P31276 330 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 ACTBP60709 375 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 PCBD1P61457 104 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 ACTG1P63261 375 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 IKZF1Q13422 519 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 BCL2A1Q16548 175 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 ZNF322Q6U7Q0 402 aaPredicted RBP7.97□□□□□ -1.13
ABCA4-201ENST00000370225 MED25Q71SY5 747 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 MRPL41Q8IXM3 137 aaKnown RBP7.97□□□□□ -1.13
ABCA4-201ENST00000370225 LILRA3Q8N6C8 439 aaPredicted RBP7.97□□□□□ -1.13
ABCA4-201ENST00000370225 OR11L1Q8NGX0 322 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 FBXO27Q8NI29 283 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 MICU1Q9BPX6 476 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 LMF2Q9BU23 707 aaKnown RBP7.97□□□□□ -1.13
ABCA4-201ENST00000370225 RLIMQ9NVW2 624 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 KDM3BQ7LBC6 1761 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 PRAMEF27A3QJZ7 478 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 MYF5P13349 255 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 DPP4P27487 766 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 WNT4P56705 351 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 PRDX1Q06830 199 aaKnown RBP7.97□□□□□ -1.13
ABCA4-201ENST00000370225 RAB31Q13636 194 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 ZNF181Q2M3W8 571 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 PRAMEF9Q5VWM5 478 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 MS4A15Q8N5U1 240 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 OR4F15Q8NGB8 312 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 OR8J2Q8NGG1 315 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 MBNL1Q9NR56 388 aaKnown RBP7.97□□□□□ -1.13
ABCA4-201ENST00000370225 MKS1Q9NXB0 559 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 PADI1Q9ULC6 663 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 AGPAT2O15120 278 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 ZIC2O95409 532 aaPredicted RBP7.97□□□□□ -1.13
ABCA4-201ENST00000370225 GRPP07492 148 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 RAB4AP20338 218 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 RPL11P62913 178 aaKnown RBP7.97□□□□□ -1.13
ABCA4-201ENST00000370225 STEAP3Q658P3 488 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 LINC00346Q8IVM7 164 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 ZNF595Q8IYB9 648 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 HRASLSQ9HDD0 168 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 MAGED1Q9Y5V3 778 aaPredicted RBP7.97□□□□□ -1.13
ABCA4-201ENST00000370225 SETD1AO15047 1707 aaKnown RBP7.97□□□□□ -1.13
ABCA4-201ENST00000370225 LOC285095A0A1B0GVY8 99 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 ZNF593O00488 134 aaPredicted RBP7.97□□□□□ -1.13
ABCA4-201ENST00000370225 NRG2O14511 850 aaPredicted RBP7.97□□□□□ -1.13
ABCA4-201ENST00000370225 SPDEFO95238 335 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 ENPP1P22413 925 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 BIDP55957 195 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 FGL1Q08830 312 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 RUNX2Q13950 521 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 DEFB109BQ30KR1 87 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 SLC6A19Q695T7 634 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 LCN8Q6JVE9 175 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 BHLHE23Q8NDY6 225 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 FAM83FQ8NEG4 500 aaPredicted RBP7.97□□□□□ -1.13
ABCA4-201ENST00000370225 SEMA6CQ9H3T2 930 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 SLC6A20Q9NP91 592 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 PTBP2Q9UKA9 531 aaKnown RBP7.97□□□□□ -1.13
ABCA4-201ENST00000370225 WIF1Q9Y5W5 379 aa7.97□□□□□ -1.13
ABCA4-201ENST00000370225 A0A1W2PQ09 198 aa7.96□□□□□ -1.13
ABCA4-201ENST00000370225 F11P03951 625 aa7.96□□□□□ -1.13
ABCA4-201ENST00000370225 AGFG1P52594 562 aaKnown RBP7.96□□□□□ -1.13
ABCA4-201ENST00000370225 NKX2-5P52952 324 aaPredicted RBP7.96□□□□□ -1.13
ABCA4-201ENST00000370225 EDDM3BP56851 147 aa7.96□□□□□ -1.13
ABCA4-201ENST00000370225 ACSM3Q53FZ2 586 aa7.96□□□□□ -1.13
ABCA4-201ENST00000370225 PAPD4Q6PIY7 484 aaKnown RBP7.96□□□□□ -1.13
ABCA4-201ENST00000370225 B3GLCTQ6Y288 498 aa7.96□□□□□ -1.13
ABCA4-201ENST00000370225 POC1BQ8TC44 478 aa7.96□□□□□ -1.13
ABCA4-201ENST00000370225 TSNAXQ99598 290 aaKnown RBP7.96□□□□□ -1.13
ABCA4-201ENST00000370225 TREX1Q9NSU2 369 aa7.96□□□□□ -1.13
ABCA4-201ENST00000370225 SLC23A2Q9UGH3 650 aa7.96□□□□□ -1.13
ABCA4-201ENST00000370225 OR6C6A6NF89 314 aa7.96□□□□□ -1.13
ABCA4-201ENST00000370225 RAB3DO95716 219 aa7.96□□□□□ -1.13
ABCA4-201ENST00000370225 ALDOBP05062 364 aa7.96□□□□□ -1.13
ABCA4-201ENST00000370225 RPA2P15927 270 aa7.96□□□□□ -1.13
ABCA4-201ENST00000370225 ZNF674Q2M3X9 581 aa7.96□□□□□ -1.13
ABCA4-201ENST00000370225 ESPNLQ6ZVH7 1005 aa7.96□□□□□ -1.13
ABCA4-201ENST00000370225 TSPYL5Q86VY4 417 aaPredicted RBP7.96□□□□□ -1.13
ABCA4-201ENST00000370225 BBS1Q8NFJ9 593 aa7.96□□□□□ -1.13
ABCA4-201ENST00000370225 SLAMF9Q96A28 289 aa7.96□□□□□ -1.13
ABCA4-201ENST00000370225 C3orf49Q96BT1 292 aa7.96□□□□□ -1.13
ABCA4-201ENST00000370225 C1QTNF2Q9BXJ5 285 aa7.96□□□□□ -1.13
ABCA4-201ENST00000370225 CACNG6Q9BXT2 260 aa7.96□□□□□ -1.13
ABCA4-201ENST00000370225 ACOT13Q9NPJ3 140 aa7.96□□□□□ -1.13
ABCA4-201ENST00000370225 TMEM100Q9NV29 134 aa7.96□□□□□ -1.13
ABCA4-201ENST00000370225 ASF1BQ9NVP2 202 aa7.96□□□□□ -1.13
ABCA4-201ENST00000370225 WASH4PA8MWX3 477 aa7.96□□□□□ -1.14
ABCA4-201ENST00000370225 ZNF736B4DX44 427 aaPredicted RBP7.96□□□□□ -1.14
ABCA4-201ENST00000370225 HPGDSO60760 199 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms