RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 RICTORQ6R327 1708 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 PRAMEF27A3QJZ7 478 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 C17orf105B2RV13 164 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 TK1P04183 234 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 HBQ1P09105 142 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 C5AR1P21730 350 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 SF3B4Q15427 424 aaKnown RBP eCLIP11.69□□□□□ -0.543e-8■■■■■ 45.8
HCFC1-202ENST00000369984 PRAMEF9Q5VWM5 478 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 PPP1R35Q8TAP8 253 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 TANKQ92844 425 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 HCAR1Q9BXC0 346 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 SLC35A3Q9Y2D2 325 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 MSTNO14793 375 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 FZD7O75084 574 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 PAX6P26367 422 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 CXADRP78310 365 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 HMGN3Q15651 99 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 DUSP7Q16829 419 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 TCTE1Q5JU00 501 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 ABHD17BQ5VST6 288 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 CUTCQ9NTM9 273 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 CA14Q9ULX7 337 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 LOC105369274A0A096LPK9 316 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 CHRM4P08173 479 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 METAP1DQ6UB28 335 aaPredicted RBP11.69□□□□□ -0.54
HCFC1-202ENST00000369984 OR4N4Q8N0Y3 316 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 LRRC18Q8N456 261 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 LIPHQ8WWY8 451 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 ZBED3Q96IU2 234 aaPredicted RBP11.69□□□□□ -0.54
HCFC1-202ENST00000369984 DZANK1Q9NVP4 752 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 SAGE1Q9NXZ1 904 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 TRAV27A0A087WT01 109 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 RFXAPO00287 272 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 HSPB6O14558 160 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 FUT1P19526 365 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 HTR3AP46098 478 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 SPARTQ8N0X7 666 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 ENKD1Q9H0I2 346 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 ANKUB1A6NFN9 424 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 STK11Q15831 433 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 PDZD11Q5EBL8 140 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 PIWIL3Q7Z3Z3 882 aaKnown RBP11.69□□□□□ -0.54
HCFC1-202ENST00000369984 GLB1L2Q8IW92 636 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 AGPAT4Q9NRZ5 378 aa11.69□□□□□ -0.54
HCFC1-202ENST00000369984 CICQ96RK0 1608 aaPredicted RBP11.68□□□□□ -0.54
HCFC1-202ENST00000369984 CIDEAO60543 219 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 STC2O76061 302 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 OR56B4Q8NH76 319 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 DMRT3Q9NQL9 472 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 C1orf123Q9NWV4 160 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 RNF212BA8MTL3 300 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 G3V2L1 256 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 SULT2B1O00204 365 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 NFKBIEO00221 500 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 PKLRP30613 574 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 ARSDP51689 593 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 DEFB110Q30KQ9 67 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 VASNQ6EMK4 673 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 DDX31Q9H8H2 851 aaKnown RBP11.68□□□□□ -0.54
HCFC1-202ENST00000369984 FAM212BQ9NTI7 297 aaPredicted RBP11.68□□□□□ -0.54
HCFC1-202ENST00000369984 ANKMY1Q9P2S6 941 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 SGK494L7N484 410 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 TERTO14746 1132 aaKnown RBP11.68□□□□□ -0.54
HCFC1-202ENST00000369984 PFKMP08237 780 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 XCR1P46094 333 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 DLX5P56178 289 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 PAGE3Q5JUK9 113 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 GPRIN1Q7Z2K8 1008 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 KDM8Q8N371 416 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 OR1E3Q8WZA6 343 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 ZNF778Q96MU6 729 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 SLC23A2Q9UGH3 650 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 DOCK9Q9BZ29 2069 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 SNED1Q8TER0 1413 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 ITGB2P05107 769 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 ETV1P50549 477 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 SEC61A1P61619 476 aaKnown RBP11.68□□□□□ -0.54
HCFC1-202ENST00000369984 TNK1Q13470 666 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 HACD4Q5VWC8 232 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 DNAJC5GQ8N7S2 189 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 PRRC1Q96M27 445 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 ALOXE3Q9BYJ1 711 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 CHRDQ9H2X0 955 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 A0A0D9SG52 128 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 SDC3O75056 442 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 MBTPS1Q14703 1052 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 RFPL4BQ6ZWI9 263 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 KDM1BQ8NB78 822 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 MCOLN1Q9GZU1 580 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 K7ERQ8 282 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 LDB3O75112 727 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 PRSS56P0CW18 603 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 PPP3CBP16298 524 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 HMGCLP35914 325 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 EPHA4P54764 986 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 MS4A2Q01362 244 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 MSMO1Q15800 293 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 ZNF322Q6U7Q0 402 aaPredicted RBP11.68□□□□□ -0.54
HCFC1-202ENST00000369984 B3GNT8Q7Z7M8 397 aa11.68□□□□□ -0.54
HCFC1-202ENST00000369984 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms