RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 OR11G2Q8NGC1 345 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 LILRB1Q8NHL6 650 aaPredicted RBP11.05□□□□□ -0.64
USF1-203ENST00000368021 M1APQ8TC57 530 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 CRELD1Q96HD1 420 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 HRASLS5Q96KN8 279 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 COG8Q96MW5 612 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 PITX2Q99697 317 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 TMEM27Q9HBJ8 222 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 MMP25Q9NPA2 562 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 MYOTQ9UBF9 498 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 FARSAQ9Y285 508 aaKnown RBP11.05□□□□□ -0.64
USF1-203ENST00000368021 NPFFR2Q9Y5X5 522 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 HEATR5AQ86XA9 2040 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 A0A0B4J2E0 115 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 A0A1B0GX12 115 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 SOCS6O14544 535 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 PPM1BO75688 479 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 LIPCP11150 499 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 JUNBP17275 347 aaPredicted RBP11.05□□□□□ -0.64
USF1-203ENST00000368021 RYKP34925 604 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 AP2S1P53680 142 aaPredicted RBP11.05□□□□□ -0.64
USF1-203ENST00000368021 CLN3Q13286 438 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 SF3B4Q15427 424 aaKnown RBP eCLIP11.05□□□□□ -0.641e-7■■■■□ 25.6
USF1-203ENST00000368021 BTBD16Q32M84 506 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 CEP78Q5JTW2 689 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 ZNF691Q5VV52 312 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 KLHL17Q6TDP4 642 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 PLEKHG7Q6ZR37 379 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 NDUFAF7Q7L592 441 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 THAP5Q7Z6K1 395 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 RNF113BQ8IZP6 322 aaKnown RBP11.05□□□□□ -0.64
USF1-203ENST00000368021 CADM3Q8N126 398 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 SETD9Q8NE22 299 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 GTPBP3Q969Y2 492 aaKnown RBP11.05□□□□□ -0.64
USF1-203ENST00000368021 COQ7Q99807 217 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 FLRT3Q9NZU0 649 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 SLC7A7Q9UM01 511 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 NTNG1Q9Y2I2 539 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 UGT2A1Q9Y4X1 527 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 EXPH5Q8NEV8 1989 aa11.04□□□□□ -0.64
USF1-203ENST00000368021 SHOXO15266 292 aa11.04□□□□□ -0.64
USF1-203ENST00000368021 ZNF264O43296 627 aa11.04□□□□□ -0.64
USF1-203ENST00000368021 CHP2O43745 196 aa11.04□□□□□ -0.64
USF1-203ENST00000368021 ADAM11O75078 769 aa11.04□□□□□ -0.64
USF1-203ENST00000368021 NADKO95544 446 aaPredicted RBP11.04□□□□□ -0.64
USF1-203ENST00000368021 POU2F1P14859 743 aa11.04□□□□□ -0.64
USF1-203ENST00000368021 GSTM3P21266 225 aa11.04□□□□□ -0.64
USF1-203ENST00000368021 CD82P27701 267 aa11.04□□□□□ -0.64
USF1-203ENST00000368021 EPHA2P29317 976 aa11.04□□□□□ -0.64
USF1-203ENST00000368021 STAT5AP42229 794 aa11.04□□□□□ -0.64
USF1-203ENST00000368021 CLK3P49761 638 aaKnown RBP11.04□□□□□ -0.64
USF1-203ENST00000368021 RNF144AP50876 292 aaPredicted RBP11.04□□□□□ -0.64
USF1-203ENST00000368021 B2MP61769 119 aa11.04□□□□□ -0.64
USF1-203ENST00000368021 RPP38P78345 283 aaKnown RBP11.04□□□□□ -0.64
USF1-203ENST00000368021 TLE3Q04726 772 aa11.04□□□□□ -0.64
USF1-203ENST00000368021 SKP2Q13309 424 aa11.04□□□□□ -0.64
USF1-203ENST00000368021 CD226Q15762 336 aa11.04□□□□□ -0.64
USF1-203ENST00000368021 XKRXQ6PP77 449 aa11.04□□□□□ -0.64
USF1-203ENST00000368021 APOOLQ6UXV4 268 aa11.04□□□□□ -0.64
USF1-203ENST00000368021 ZNF730Q6ZMV8 503 aa11.04□□□□□ -0.64
USF1-203ENST00000368021 MBOAT2Q6ZWT7 520 aa11.04□□□□□ -0.64
USF1-203ENST00000368021 RRM2BQ7LG56 351 aa11.04□□□□□ -0.64
USF1-203ENST00000368021 ZER1Q7Z7L7 766 aa11.04□□□□□ -0.64
USF1-203ENST00000368021 DTX1Q86Y01 620 aa11.04□□□□□ -0.64
USF1-203ENST00000368021 NKAIN4Q8IVV8 208 aa11.04□□□□□ -0.64
USF1-203ENST00000368021 SLC15A4Q8N697 577 aa11.04□□□□□ -0.64
USF1-203ENST00000368021 POGLUT1Q8NBL1 392 aa11.04□□□□□ -0.64
USF1-203ENST00000368021 PHOSPHO1Q8TCT1 267 aa11.04□□□□□ -0.64
USF1-203ENST00000368021 NKD1Q969G9 470 aa11.04□□□□□ -0.64
USF1-203ENST00000368021 APOL4Q9BPW4 351 aa11.04□□□□□ -0.64
USF1-203ENST00000368021 PRSS27Q9BQR3 290 aa11.04□□□□□ -0.64
USF1-203ENST00000368021 DEFB126Q9BYW3 111 aa11.04□□□□□ -0.64
USF1-203ENST00000368021 UCK2Q9BZX2 261 aa11.04□□□□□ -0.64
USF1-203ENST00000368021 KRCC1Q9NPI7 259 aaPredicted RBP11.04□□□□□ -0.64
USF1-203ENST00000368021 SPEF1Q9Y4P9 236 aa11.04□□□□□ -0.64
USF1-203ENST00000368021 PCDHGA6Q9Y5G7 932 aa11.04□□□□□ -0.64
USF1-203ENST00000368021 GMPPBQ9Y5P6 360 aa11.04□□□□□ -0.64
USF1-203ENST00000368021 A0A087WV48 116 aa11.03□□□□□ -0.64
USF1-203ENST00000368021 NSG1A0A0A6YYJ2 146 aa11.03□□□□□ -0.64
USF1-203ENST00000368021 TERTO14746 1132 aaKnown RBP11.03□□□□□ -0.64
USF1-203ENST00000368021 FADS1O60427 444 aa11.03□□□□□ -0.64
USF1-203ENST00000368021 RAD1O60671 282 aa11.03□□□□□ -0.64
USF1-203ENST00000368021 LYPD3O95274 346 aa11.03□□□□□ -0.64
USF1-203ENST00000368021 OSMP13725 252 aa11.03□□□□□ -0.64
USF1-203ENST00000368021 EVI2BP34910 448 aa11.03□□□□□ -0.64
USF1-203ENST00000368021 ISL1P61371 349 aa11.03□□□□□ -0.64
USF1-203ENST00000368021 COPZ1P61923 177 aa11.03□□□□□ -0.64
USF1-203ENST00000368021 ALDH6A1Q02252 535 aaKnown RBP11.03□□□□□ -0.64
USF1-203ENST00000368021 NFATC3Q12968 1075 aa11.03□□□□□ -0.64
USF1-203ENST00000368021 SELENBP1Q13228 472 aa11.03□□□□□ -0.64
USF1-203ENST00000368021 DNASE1L3Q13609 305 aa11.03□□□□□ -0.64
USF1-203ENST00000368021 RAPSNQ13702 412 aa11.03□□□□□ -0.64
USF1-203ENST00000368021 ULK3Q6PHR2 472 aa11.03□□□□□ -0.64
USF1-203ENST00000368021 PPP1R32Q7Z5V6 425 aa11.03□□□□□ -0.64
USF1-203ENST00000368021 IGFN1Q86VF2 1251 aa11.03□□□□□ -0.64
USF1-203ENST00000368021 PIGXQ8TBF5 258 aa11.03□□□□□ -0.64
USF1-203ENST00000368021 SLC22A8Q8TCC7 542 aa11.03□□□□□ -0.64
USF1-203ENST00000368021 FBLIM1Q8WUP2 373 aa11.03□□□□□ -0.64
USF1-203ENST00000368021 DNAJA4Q8WW22 397 aaPredicted RBP11.03□□□□□ -0.64
USF1-203ENST00000368021 HS6ST2Q96MM7 605 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms