RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 RBM24Q9BX46 236 aaKnown RBP13.1□□□□□ -0.31
SF3B5-201ENST00000367569 POLDIP3Q9BY77 421 aaKnown RBP13.1□□□□□ -0.31
SF3B5-201ENST00000367569 CCM2LQ9NUG4 571 aaPredicted RBP13.1□□□□□ -0.31
SF3B5-201ENST00000367569 STOML1Q9UBI4 398 aa13.1□□□□□ -0.31
SF3B5-201ENST00000367569 ZNF629Q9UEG4 869 aaPredicted RBP13.1□□□□□ -0.31
SF3B5-201ENST00000367569 TMED7-TICAM2A0A0A6YYA0 188 aa13.09□□□□□ -0.31
SF3B5-201ENST00000367569 ZC3H12DA2A288 527 aaKnown RBP13.09□□□□□ -0.31
SF3B5-201ENST00000367569 FAM221AA4D161 298 aa13.09□□□□□ -0.31
SF3B5-201ENST00000367569 ETV2O00321 342 aaPredicted RBP13.09□□□□□ -0.31
SF3B5-201ENST00000367569 TPST1O60507 370 aa13.09□□□□□ -0.31
SF3B5-201ENST00000367569 FESP07332 822 aa13.09□□□□□ -0.31
SF3B5-201ENST00000367569 DRD4P21917 467 aa13.09□□□□□ -0.31
SF3B5-201ENST00000367569 ADH6P28332 368 aa13.09□□□□□ -0.31
SF3B5-201ENST00000367569 MAGEA8P43361 318 aa13.09□□□□□ -0.31
SF3B5-201ENST00000367569 BNIP2Q12982 314 aa13.09□□□□□ -0.31
SF3B5-201ENST00000367569 EXOC3L2Q2M3D2 409 aa13.09□□□□□ -0.31
SF3B5-201ENST00000367569 PDSS1Q5T2R2 415 aa13.09□□□□□ -0.31
SF3B5-201ENST00000367569 OR2A2Q6IF42 318 aa13.09□□□□□ -0.31
SF3B5-201ENST00000367569 REEP3Q6NUK4 255 aa13.09□□□□□ -0.31
SF3B5-201ENST00000367569 GRINAQ7Z429 371 aa13.09□□□□□ -0.31
SF3B5-201ENST00000367569 TREML1Q86YW5 311 aa13.09□□□□□ -0.31
SF3B5-201ENST00000367569 CMIPQ8IY22 773 aa13.09□□□□□ -0.31
SF3B5-201ENST00000367569 SMYD1Q8NB12 490 aa13.09□□□□□ -0.31
SF3B5-201ENST00000367569 OR10A6Q8NH74 314 aa13.09□□□□□ -0.31
SF3B5-201ENST00000367569 OIT3Q8WWZ8 545 aa13.09□□□□□ -0.31
SF3B5-201ENST00000367569 RNASE6Q93091 150 aaKnown RBP13.09□□□□□ -0.31
SF3B5-201ENST00000367569 STARD4Q96DR4 205 aa13.09□□□□□ -0.31
SF3B5-201ENST00000367569 ZFP3Q96NJ6 502 aa13.09□□□□□ -0.31
SF3B5-201ENST00000367569 SPATA9Q9BWV2 254 aa13.09□□□□□ -0.31
SF3B5-201ENST00000367569 CLEC4MQ9H2X3 399 aaPredicted RBP13.09□□□□□ -0.31
SF3B5-201ENST00000367569 RASSF1Q9NS23 344 aa13.09□□□□□ -0.31
SF3B5-201ENST00000367569 THUMPD1Q9NXG2 353 aaKnown RBP13.09□□□□□ -0.31
SF3B5-201ENST00000367569 CHRNA9Q9UGM1 479 aa13.09□□□□□ -0.31
SF3B5-201ENST00000367569 OSGIN1Q9UJX0 560 aa13.09□□□□□ -0.31
SF3B5-201ENST00000367569 CORO2BQ9UQ03 480 aa13.09□□□□□ -0.31
SF3B5-201ENST00000367569 ANGPT4Q9Y264 503 aa13.09□□□□□ -0.31
SF3B5-201ENST00000367569 TMED7Q9Y3B3 224 aa13.09□□□□□ -0.31
SF3B5-201ENST00000367569 GJE1A6NN92 205 aa13.08□□□□□ -0.32
SF3B5-201ENST00000367569 DYNC1I1O14576 645 aa13.08□□□□□ -0.32
SF3B5-201ENST00000367569 SMAD9O15198 467 aaKnown RBP13.08□□□□□ -0.32
SF3B5-201ENST00000367569 THBS1P07996 1170 aa13.08□□□□□ -0.32
SF3B5-201ENST00000367569 AGTR1P30556 359 aa13.08□□□□□ -0.32
SF3B5-201ENST00000367569 ACAA2P42765 397 aaKnown RBP13.08□□□□□ -0.32
SF3B5-201ENST00000367569 DIO1P49895 249 aa13.08□□□□□ -0.32
SF3B5-201ENST00000367569 CTBP2P56545 445 aa13.08□□□□□ -0.32
SF3B5-201ENST00000367569 MAPRE2Q15555 327 aa13.08□□□□□ -0.32
SF3B5-201ENST00000367569 FBXL19-AS1Q494R0 122 aa13.08□□□□□ -0.32
SF3B5-201ENST00000367569 FCRLAQ7L513 359 aa13.08□□□□□ -0.32
SF3B5-201ENST00000367569 MTDHQ86UE4 582 aaKnown RBP13.08□□□□□ -0.32
SF3B5-201ENST00000367569 ADGRG3Q86Y34 549 aa13.08□□□□□ -0.32
SF3B5-201ENST00000367569 HIPK4Q8NE63 616 aa13.08□□□□□ -0.32
SF3B5-201ENST00000367569 LINC01560Q8TB33 94 aa13.08□□□□□ -0.32
SF3B5-201ENST00000367569 RNF128Q8TEB7 428 aa13.08□□□□□ -0.32
SF3B5-201ENST00000367569 NINJ1Q92982 152 aa13.08□□□□□ -0.32
SF3B5-201ENST00000367569 ZNF775Q96BV0 537 aaPredicted RBP13.08□□□□□ -0.32
SF3B5-201ENST00000367569 LRRC58Q96CX6 371 aa13.08□□□□□ -0.32
SF3B5-201ENST00000367569 ZNF300Q96RE9 604 aaPredicted RBP13.08□□□□□ -0.32
SF3B5-201ENST00000367569 FOXC2Q99958 501 aa13.08□□□□□ -0.32
SF3B5-201ENST00000367569 WFDC6Q9BQY6 131 aa13.08□□□□□ -0.32
SF3B5-201ENST00000367569 CXXC4Q9H2H0 198 aa13.08□□□□□ -0.32
SF3B5-201ENST00000367569 BCL2L10Q9HD36 194 aa13.08□□□□□ -0.32
SF3B5-201ENST00000367569 SERINC1Q9NRX5 453 aa13.08□□□□□ -0.32
SF3B5-201ENST00000367569 JKAMPQ9P055 326 aa13.08□□□□□ -0.32
SF3B5-201ENST00000367569 KLHL13Q9P2N7 655 aa13.08□□□□□ -0.32
SF3B5-201ENST00000367569 PROCRQ9UNN8 238 aa13.08□□□□□ -0.32
SF3B5-201ENST00000367569 CCT8L1PA6NM43 557 aa13.07□□□□□ -0.32
SF3B5-201ENST00000367569 A6NNC1 897 aa13.07□□□□□ -0.32
SF3B5-201ENST00000367569 ZNF814B7Z6K7 855 aa13.07□□□□□ -0.32
SF3B5-201ENST00000367569 M0R3H8 397 aa13.07□□□□□ -0.32
SF3B5-201ENST00000367569 SULT2B1O00204 365 aa13.07□□□□□ -0.32
SF3B5-201ENST00000367569 RAMP1O60894 148 aa13.07□□□□□ -0.32
SF3B5-201ENST00000367569 SS18L1O75177 396 aaPredicted RBP13.07□□□□□ -0.32
SF3B5-201ENST00000367569 IL18BPO95998 194 aa13.07□□□□□ -0.32
SF3B5-201ENST00000367569 COX4I1P13073 169 aa13.07□□□□□ -0.32
SF3B5-201ENST00000367569 SLC6A2P23975 617 aa13.07□□□□□ -0.32
SF3B5-201ENST00000367569 HTR2AP28223 471 aa13.07□□□□□ -0.32
SF3B5-201ENST00000367569 CCKARP32238 428 aa13.07□□□□□ -0.32
SF3B5-201ENST00000367569 PEX19P40855 299 aa13.07□□□□□ -0.32
SF3B5-201ENST00000367569 POLR2HP52434 150 aaKnown RBP13.07□□□□□ -0.32
SF3B5-201ENST00000367569 DMTNQ08495 405 aa13.07□□□□□ -0.32
SF3B5-201ENST00000367569 CYLC2Q14093 348 aaPredicted RBP13.07□□□□□ -0.32
SF3B5-201ENST00000367569 GUSBP1Q15486 140 aa13.07□□□□□ -0.32
SF3B5-201ENST00000367569 AP1ARQ63HQ0 302 aa13.07□□□□□ -0.32
SF3B5-201ENST00000367569 NANOGP8Q6NSW7 305 aa13.07□□□□□ -0.32
SF3B5-201ENST00000367569 NUFIP2Q7Z417 695 aaKnown RBP13.07□□□□□ -0.32
SF3B5-201ENST00000367569 CDC20BQ86Y33 519 aa13.07□□□□□ -0.32
SF3B5-201ENST00000367569 ZNF610Q8N9Z0 462 aa13.07□□□□□ -0.32
SF3B5-201ENST00000367569 C11orf65Q8NCR3 313 aa13.07□□□□□ -0.32
SF3B5-201ENST00000367569 VANGL1Q8TAA9 524 aaPredicted RBP13.07□□□□□ -0.32
SF3B5-201ENST00000367569 TSPEARQ8WU66 669 aa13.07□□□□□ -0.32
SF3B5-201ENST00000367569 CPNE4Q96A23 557 aaPredicted RBP13.07□□□□□ -0.32
SF3B5-201ENST00000367569 REXO5Q96IC2 774 aaKnown RBP13.07□□□□□ -0.32
SF3B5-201ENST00000367569 TMUB1Q9BVT8 246 aa13.07□□□□□ -0.32
SF3B5-201ENST00000367569 NSRP1Q9H0G5 558 aaKnown RBP13.07□□□□□ -0.32
SF3B5-201ENST00000367569 TMEM38AQ9H6F2 299 aa13.07□□□□□ -0.32
SF3B5-201ENST00000367569 KAT8Q9H7Z6 458 aaKnown RBP13.07□□□□□ -0.32
SF3B5-201ENST00000367569 NANOGQ9H9S0 305 aa13.07□□□□□ -0.32
SF3B5-201ENST00000367569 ST6GALNAC2Q9UJ37 374 aa13.07□□□□□ -0.32
SF3B5-201ENST00000367569 EMC9Q9Y3B6 208 aa13.07□□□□□ -0.32
SF3B5-201ENST00000367569 FREM1Q5H8C1 2179 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms