RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 NPIPA5A0A0B4J1W7 369 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 TMEM200CA6NKL6 621 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 TNFSF12O43508 249 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 S100A8P05109 93 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 HOXB5P09067 269 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 F2RP25116 425 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 WDR5P61964 334 aaKnown RBP11.67□□□□□ -0.54
TPR-201ENST00000367478 EMC10Q5UCC4 262 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 WBP2NLQ6ICG8 309 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 RPL22L1Q6P5R6 122 aaKnown RBP11.67□□□□□ -0.54
TPR-201ENST00000367478 UMODL1-AS1Q8N2C9 162 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 MTMR14Q8NCE2 650 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 EMC7Q9NPA0 242 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 ACKR4Q9NPB9 350 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 CRHBPP24387 322 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 SEC61A1P61619 476 aaKnown RBP11.67□□□□□ -0.54
TPR-201ENST00000367478 CPZQ66K79 652 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 F2RL3Q96RI0 385 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 COQ3Q9NZJ6 369 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 ATXN7L1Q9ULK2 861 aaPredicted RBP11.67□□□□□ -0.54
TPR-201ENST00000367478 RNF150Q9ULK6 438 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 HEATR1Q9H583 2144 aaKnown RBP11.67□□□□□ -0.54
TPR-201ENST00000367478 XKRY2A2RUG3 117 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 JUNDP17535 347 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 LY6G5CQ5SRR4 150 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 AADACL3Q5VUY0 350 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 OR10K1Q8NGX5 313 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 FBRSL1Q9HCM7 1045 aaKnown RBP11.67□□□□□ -0.54
TPR-201ENST00000367478 SLC6A20Q9NP91 592 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 FAM96BQ9Y3D0 163 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 KIF13AQ9H1H9 1805 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 PRAMEF27A3QJZ7 478 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 SPP1P10451 314 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 VIPR2P41587 438 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 RPS26P62854 115 aaKnown RBP11.67□□□□□ -0.54
TPR-201ENST00000367478 RGNQ15493 299 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 TEAD2Q15562 447 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 PRAMEF9Q5VWM5 478 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 FJX1Q86VR8 437 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 SIAH1Q8IUQ4 282 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 PHYHIPQ92561 330 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 C10orf90Q96M02 699 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 QRSL1Q9H0R6 528 aaKnown RBP11.67□□□□□ -0.54
TPR-201ENST00000367478 CLDN24A6NM45 220 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 DBHP09172 617 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 HLA-DMAP28067 261 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 RABEPKQ7Z6M1 372 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 CHRDL1Q9BU40 450 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 RYDENQ9NUL5 291 aaKnown RBP11.67□□□□□ -0.54
TPR-201ENST00000367478 SLC2A8Q9NY64 477 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 B3GAT1Q9P2W7 334 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 NNATQ16517 81 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 BTNL8Q6UX41 500 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 TCTE3Q8IZS6 198 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 KLHDC1Q8N7A1 406 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 ZNF516Q92618 1163 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 DPH2Q9BQC3 489 aaPredicted RBP11.67□□□□□ -0.54
TPR-201ENST00000367478 METTL9Q9H1A3 318 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 SDR39U1Q9NRG7 319 aaPredicted RBP11.67□□□□□ -0.54
TPR-201ENST00000367478 ACAD8Q9UKU7 415 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 WNT6Q9Y6F9 365 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 CYTIPO60759 359 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 ACP2P11117 423 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 FUT1P19526 365 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 GKP32189 559 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 SUB1P53999 127 aaKnown RBP eCLIP11.67□□□□□ -0.547e-8■■■■■ 44.8
TPR-201ENST00000367478 ZNF691Q5VV52 312 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 MEPCEQ7L2J0 689 aaKnown RBP11.67□□□□□ -0.54
TPR-201ENST00000367478 OR2T27Q8NH04 317 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 ZMYND19Q96E35 227 aaPredicted RBP11.67□□□□□ -0.54
TPR-201ENST00000367478 SMIM3Q9BZL3 60 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 APOBEC3BQ9UH17 382 aaKnown RBP11.67□□□□□ -0.54
TPR-201ENST00000367478 PURGQ9UJV8 347 aaKnown RBP11.67□□□□□ -0.54
TPR-201ENST00000367478 RNF24Q9Y225 148 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 SSUH2Q9Y2M2 353 aa11.67□□□□□ -0.54
TPR-201ENST00000367478 NUPL2O15504 423 aaKnown RBP11.66□□□□□ -0.54
TPR-201ENST00000367478 SNNO75324 88 aaPredicted RBP11.66□□□□□ -0.54
TPR-201ENST00000367478 ZNF217O75362 1048 aa11.66□□□□□ -0.54
TPR-201ENST00000367478 CSN1S1P47710 185 aa11.66□□□□□ -0.54
TPR-201ENST00000367478 EPHA4P54764 986 aa11.66□□□□□ -0.54
TPR-201ENST00000367478 SYT13Q7L8C5 426 aa11.66□□□□□ -0.54
TPR-201ENST00000367478 RNF113BQ8IZP6 322 aaKnown RBP11.66□□□□□ -0.54
TPR-201ENST00000367478 BABAM2Q9NXR7 383 aa11.66□□□□□ -0.54
TPR-201ENST00000367478 OR5K3A6NET4 321 aa11.66□□□□□ -0.54
TPR-201ENST00000367478 MT-ND4P03905 459 aa11.66□□□□□ -0.54
TPR-201ENST00000367478 BAXQ07812 192 aa11.66□□□□□ -0.54
TPR-201ENST00000367478 GPR18Q14330 331 aa11.66□□□□□ -0.54
TPR-201ENST00000367478 ZNRF4Q8WWF5 429 aa11.66□□□□□ -0.54
TPR-201ENST00000367478 CPNE4Q96A23 557 aaPredicted RBP11.66□□□□□ -0.54
TPR-201ENST00000367478 IKZF4Q9H2S9 585 aa11.66□□□□□ -0.54
TPR-201ENST00000367478 GAR1Q9NY12 217 aaKnown RBP11.66□□□□□ -0.54
TPR-201ENST00000367478 UGT2A1Q9Y4X1 527 aa11.66□□□□□ -0.54
TPR-201ENST00000367478 KDM4FA0A1W2PPD8 638 aa11.66□□□□□ -0.54
TPR-201ENST00000367478 SMLR1H3BR10 107 aa11.66□□□□□ -0.54
TPR-201ENST00000367478 PPP1R11O60927 126 aaPredicted RBP11.66□□□□□ -0.54
TPR-201ENST00000367478 SOD2P04179 222 aa11.66□□□□□ -0.54
TPR-201ENST00000367478 FDXRP22570 491 aa11.66□□□□□ -0.54
TPR-201ENST00000367478 INTS12Q96CB8 462 aaKnown RBP11.66□□□□□ -0.54
TPR-201ENST00000367478 PEX11GQ96HA9 241 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms