RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 IGFN1Q86VF2 1251 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 TMEM102Q8N9M5 508 aaPredicted RBP8.1□□□□□ -1.11
SYNE1-206ENST00000367253 CLRN3Q8NCR9 226 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 ANGPTL6Q8NI99 470 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 C11orf40Q8WZ69 217 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 OR5P2Q8WZ92 322 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 ALG3Q92685 438 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 ZC3HAV1LQ96H79 300 aaKnown RBP8.1□□□□□ -1.11
SYNE1-206ENST00000367253 OCSTAMPQ9BR26 566 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 ST6GALNAC4Q9H4F1 302 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 OBP2BQ9NPH6 170 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 GAR1Q9NY12 217 aaKnown RBP8.1□□□□□ -1.11
SYNE1-206ENST00000367253 NLGN3Q9NZ94 848 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 UTS2RQ9UKP6 389 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 A0A1W2PPQ1 181 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 ADRB1P08588 477 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 DRD2P14416 443 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 ARSAP15289 507 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 CTRB1P17538 263 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 GNRHRP30968 328 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 KCNQ1P51787 676 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 PPP2CAP67775 309 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 SIRPAP78324 504 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 ILKQ13418 452 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 ACSM3Q53FZ2 586 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 SFT2D3Q587I9 215 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 CTRB2Q6GPI1 263 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 HEPHL1Q6MZM0 1159 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 BTNL3Q6UXE8 466 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 IRF2BP1Q8IU81 584 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 WFDC8Q8IUA0 241 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 FAM71AQ8IYT1 594 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 OR4N2Q8NGD1 307 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 OR1J4Q8NGS1 313 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 CPT1CQ8TCG5 803 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 ZBTB8AQ96BR9 441 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 FAM84AQ96KN4 292 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 CPXM1Q96SM3 734 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 GPR21Q99679 349 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 HSD17B14Q9BPX1 270 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 CACNG6Q9BXT2 260 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 RAB1BQ9H0U4 201 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 PATZ1Q9HBE1 687 aaKnown RBP8.09□□□□□ -1.11
SYNE1-206ENST00000367253 SRA1Q9HD15 236 aaKnown RBP8.09□□□□□ -1.11
SYNE1-206ENST00000367253 SIRT7Q9NRC8 400 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 ZNF275Q9NSD4 429 aaPredicted RBP8.09□□□□□ -1.11
SYNE1-206ENST00000367253 CUTCQ9NTM9 273 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 CNTN6Q9UQ52 1028 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 PRKYO43930 277 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 MT-ND2P03891 347 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 SH3PXD2AQ5TCZ1 1133 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 SAMD13Q5VXD3 122 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 IL20RBQ6UXL0 311 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 DBX2Q6ZNG2 339 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 ZNF367Q7RTV3 350 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 ZNF584Q8IVC4 421 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 NAXDQ8IW45 347 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 OR4F15Q8NGB8 312 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 OR14A16Q8NHC5 309 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 THAP4Q8WY91 577 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 RND1Q92730 232 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 BTF3L4Q96K17 158 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 FCRL3Q96P31 734 aaPredicted RBP8.09□□□□□ -1.11
SYNE1-206ENST00000367253 TMEM43Q9BTV4 400 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 WWTR1Q9GZV5 400 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 BARX1Q9HBU1 254 aaPredicted RBP8.09□□□□□ -1.11
SYNE1-206ENST00000367253 EXOSC1Q9Y3B2 195 aaKnown RBP8.09□□□□□ -1.11
SYNE1-206ENST00000367253 ZNF670-ZNF695F2Z2N8 137 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 J3QLW9 94 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 OR2T1O43869 369 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 FAM155BO75949 473 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 ZNF19P17023 458 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 GCGRP47871 477 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 LEPRP48357 1165 aaKnown RBP8.09□□□□□ -1.11
SYNE1-206ENST00000367253 CAMK2BQ13554 666 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 NPY5RQ15761 445 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 KIAA1614Q5VZ46 1190 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 CPXM2Q8N436 756 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 YIPF7Q8N8F6 280 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 GDPD1Q8N9F7 314 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 CSNK2A3Q8NEV1 391 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 GEMIN6Q8WXD5 167 aaKnown RBP8.09□□□□□ -1.11
SYNE1-206ENST00000367253 CNOT9Q92600 299 aaKnown RBP8.09□□□□□ -1.11
SYNE1-206ENST00000367253 PGAM5Q96HS1 289 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 TMEM41AQ96HV5 264 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 RPF2Q9H7B2 306 aaKnown RBP8.09□□□□□ -1.11
SYNE1-206ENST00000367253 ELOVL3Q9HB03 270 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 FGF21Q9NSA1 209 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 UBR3Q6ZT12 1888 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 MAP1BP46821 2468 aaKnown RBP8.09□□□□□ -1.11
SYNE1-206ENST00000367253 SULT2B1O00204 365 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 TNFSF12O43508 249 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 PCDH7O60245 1069 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 GALNSP34059 522 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 GABRA2P47869 451 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 UBE2G2P60604 165 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 GANABQ14697 944 aaKnown RBP8.09□□□□□ -1.11
SYNE1-206ENST00000367253 SLC22A10Q63ZE4 541 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 WDR88Q6ZMY6 472 aa8.09□□□□□ -1.11
SYNE1-206ENST00000367253 Q6ZVL8 140 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms