RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 LRRN3Q9H3W5 708 aa9.99□□□□□ -0.81
H3F3A-202ENST00000366814 FLRT3Q9NZU0 649 aa9.99□□□□□ -0.81
H3F3A-202ENST00000366814 CCDC59Q9P031 241 aaKnown RBP9.99□□□□□ -0.81
H3F3A-202ENST00000366814 CLEC2DQ9UHP7 191 aa9.99□□□□□ -0.81
H3F3A-202ENST00000366814 LSM2Q9Y333 95 aaKnown RBP9.99□□□□□ -0.81
H3F3A-202ENST00000366814 PCDHGA3Q9Y5H0 932 aa9.99□□□□□ -0.81
H3F3A-202ENST00000366814 A3GALT2U3KPV4 340 aa9.99□□□□□ -0.81
H3F3A-202ENST00000366814 SPTBP11277 2137 aa9.99□□□□□ -0.81
H3F3A-202ENST00000366814 C2orf92A0A1B0GVN3 265 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 OR6C76A6NM76 312 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 RIIAD1A6NNX1 92 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 IFNGP01579 166 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 CLPSP04118 112 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 TSPAN19P0C672 248 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 UBL4AP11441 157 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 ZNF3P17036 446 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 IL12BP29460 328 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 SLC6A6P31641 620 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 ADH7P40394 386 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 TMED1Q13445 227 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 ZNF404Q494X3 552 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 C1orf189Q5VU69 101 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 C19orf48Q6RUI8 117 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 RTL4Q6ZR62 310 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 OAFQ86UD1 273 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 ZBTB46Q86UZ6 589 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 LNX2Q8N448 690 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 PSD4Q8NDX1 1056 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 OTULINQ96BN8 352 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 EFHD2Q96C19 240 aaPredicted RBP9.98□□□□□ -0.81
H3F3A-202ENST00000366814 SH3YL1Q96HL8 342 aaPredicted RBP9.98□□□□□ -0.81
H3F3A-202ENST00000366814 GAL3ST4Q96RP7 486 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 ZNF426Q9BUY5 554 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 TAPBPLQ9BX59 468 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 EXOSC4Q9NPD3 245 aaKnown RBP9.98□□□□□ -0.81
H3F3A-202ENST00000366814 ISYNA1Q9NPH2 558 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 ATP13A2Q9NQ11 1180 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 FBXO8Q9NRD0 319 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 C20orf141Q9NUB4 165 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 IL20RAQ9UHF4 553 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 MKL2Q9ULH7 1088 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 KMT2BQ9UMN6 2715 aaPredicted RBP9.98□□□□□ -0.81
H3F3A-202ENST00000366814 GTPBP1O00178 669 aaKnown RBP9.98□□□□□ -0.81
H3F3A-202ENST00000366814 IGKV3-11P04433 115 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 ENDOUP21128 410 aaKnown RBP9.98□□□□□ -0.81
H3F3A-202ENST00000366814 NOS3P29474 1203 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 S100A5P33763 92 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 OPRL1P41146 370 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 SLC9A3P48764 834 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 RAB15P59190 212 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 GABREP78334 506 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 PLAURQ03405 335 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 CRYZQ08257 329 aaKnown RBP9.98□□□□□ -0.81
H3F3A-202ENST00000366814 KLHL26Q53HC5 615 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 VWA2Q5GFL6 755 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 AADACL4Q5VUY2 407 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 WBP2NLQ6ICG8 309 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 RHBDD2Q6NTF9 364 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 ARHGAP11AQ6P4F7 1023 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 CPOQ8IVL8 374 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 SLC15A4Q8N697 577 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 OR4D9Q8NGE8 314 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 OR13C2Q8NGS9 318 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 OR4C3Q8NH37 302 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 PHOSPHO1Q8TCT1 267 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 ZNF721Q8TF20 911 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 MEPEQ9NQ76 525 aaPredicted RBP9.98□□□□□ -0.81
H3F3A-202ENST00000366814 EXOSC3Q9NQT5 275 aaKnown RBP9.98□□□□□ -0.81
H3F3A-202ENST00000366814 NDUFB11Q9NX14 153 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 STUB1Q9UNE7 303 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 SSR3Q9UNL2 185 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 SIGLEC7Q9Y286 467 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 B3GNT3Q9Y2A9 372 aa9.98□□□□□ -0.81
H3F3A-202ENST00000366814 ANKRD11Q6UB99 2663 aaPredicted RBP9.97□□□□□ -0.81
H3F3A-202ENST00000366814 A0A1W2PQM1 296 aa9.97□□□□□ -0.81
H3F3A-202ENST00000366814 SLC22A31A6NKX4 558 aa9.97□□□□□ -0.81
H3F3A-202ENST00000366814 PRR23D1E9PI22 279 aaPredicted RBP9.97□□□□□ -0.81
H3F3A-202ENST00000366814 NTN3O00634 580 aaPredicted RBP9.97□□□□□ -0.81
H3F3A-202ENST00000366814 BHLHE40O14503 412 aa9.97□□□□□ -0.81
H3F3A-202ENST00000366814 ADRA2AP08913 450 aa9.97□□□□□ -0.81
H3F3A-202ENST00000366814 HBQ1P09105 142 aa9.97□□□□□ -0.81
H3F3A-202ENST00000366814 ZGLP1P0C6A0 271 aa9.97□□□□□ -0.81
H3F3A-202ENST00000366814 PRR23D2P0DMB1 279 aaPredicted RBP9.97□□□□□ -0.81
H3F3A-202ENST00000366814 PNMTP11086 282 aa9.97□□□□□ -0.81
H3F3A-202ENST00000366814 HK1P19367 917 aa9.97□□□□□ -0.81
H3F3A-202ENST00000366814 TBXA2RP21731 343 aa9.97□□□□□ -0.81
H3F3A-202ENST00000366814 ETV5P41161 510 aa9.97□□□□□ -0.81
H3F3A-202ENST00000366814 SOX3P41225 446 aa9.97□□□□□ -0.81
H3F3A-202ENST00000366814 ETV1P50549 477 aa9.97□□□□□ -0.81
H3F3A-202ENST00000366814 CCR4P51679 360 aa9.97□□□□□ -0.81
H3F3A-202ENST00000366814 PRAMEF17Q5VTA0 474 aa9.97□□□□□ -0.81
H3F3A-202ENST00000366814 KIRREL2Q6UWL6 708 aa9.97□□□□□ -0.81
H3F3A-202ENST00000366814 LINC00114Q6XXX2 140 aa9.97□□□□□ -0.81
H3F3A-202ENST00000366814 ARHGAP22Q7Z5H3 698 aa9.97□□□□□ -0.81
H3F3A-202ENST00000366814 ATCAYQ86WG3 371 aa9.97□□□□□ -0.81
H3F3A-202ENST00000366814 KLHL36Q8N4N3 616 aa9.97□□□□□ -0.81
H3F3A-202ENST00000366814 PLPP5Q8NEB5 264 aa9.97□□□□□ -0.81
H3F3A-202ENST00000366814 OR6Q1Q8NGQ2 317 aa9.97□□□□□ -0.81
H3F3A-202ENST00000366814 OR1N1Q8NGS0 311 aa9.97□□□□□ -0.81
H3F3A-202ENST00000366814 UFD1Q92890 307 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms