RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 SLX4IPQ5VYV7 408 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 CTRB2Q6GPI1 263 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 NMNAT1Q9HAN9 279 aaPredicted RBP8.74□□□□□ -1.01
VPS13A-203ENST00000360280 FOXD2O60548 495 aaPredicted RBP8.74□□□□□ -1.01
VPS13A-203ENST00000360280 FZD7O75084 574 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 HPNP05981 417 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 GAB1Q13480 694 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 CNTN4Q8IWV2 1026 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 OR9Q2Q8NGE9 314 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 ZFP90Q8TF47 636 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 BCL9LQ86UU0 1499 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 DCCP43146 1447 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 EMP2P54851 167 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 TCTE1Q5JU00 501 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 SLC35F3Q8IY50 421 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 C7orf43Q8WVR3 580 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 NUDT9Q9BW91 350 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 RBFOX1Q9NWB1 397 aaKnown RBP8.74□□□□□ -1.01
VPS13A-203ENST00000360280 C10orf71Q711Q0 1435 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 TMEM212A6NML5 194 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 F7P08709 466 aaPredicted RBP8.73□□□□□ -1.01
VPS13A-203ENST00000360280 SYN1P17600 705 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 IL4RP24394 825 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 BAK1Q16611 211 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 TMEM201Q5SNT2 666 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 C15orf52Q6ZUT6 534 aaKnown RBP8.73□□□□□ -1.01
VPS13A-203ENST00000360280 OR2T27Q8NH04 317 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 FBXL18Q96ME1 805 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 GIMAP2Q9UG22 337 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 FRMD1Q8N878 549 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 CDS1Q92903 461 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 SEMA4CQ9C0C4 833 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 PRAMEF27A3QJZ7 478 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 RNASET2O00584 256 aaKnown RBP8.73□□□□□ -1.01
VPS13A-203ENST00000360280 RPL17P18621 184 aaKnown RBP8.73□□□□□ -1.01
VPS13A-203ENST00000360280 DTYMKP23919 212 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 SEC61A1P61619 476 aaKnown RBP8.73□□□□□ -1.01
VPS13A-203ENST00000360280 TP53I3Q53FA7 332 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 PRAMEF9Q5VWM5 478 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 NETO1Q8TDF5 533 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 TMEM59Q9BXS4 323 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 YIPF1Q9Y548 306 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 SPO11Q9Y5K1 396 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 PSAT1Q9Y617 370 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 ZNF44P15621 663 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 ELAVL3Q14576 367 aaKnown RBP8.73□□□□□ -1.01
VPS13A-203ENST00000360280 CREB3L4Q8TEY5 395 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 IMP4Q96G21 291 aaKnown RBP8.73□□□□□ -1.01
VPS13A-203ENST00000360280 FAM71F1Q96KD3 344 aaPredicted RBP8.73□□□□□ -1.01
VPS13A-203ENST00000360280 APOBEC3GQ9HC16 384 aaKnown RBP8.73□□□□□ -1.01
VPS13A-203ENST00000360280 LARP4Q71RC2 724 aaKnown RBP eCLIP8.73□□□□□ -1.01
VPS13A-203ENST00000360280 EID2Q8N6I1 236 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 EGLN3Q9H6Z9 239 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 KCNK12Q9HB15 430 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 ZNF281Q9Y2X9 895 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 TBX18O95935 607 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 ETV3P41162 512 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 PTTG1IPP53801 180 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 UBE2G1P62253 170 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 CHRNEQ04844 493 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 FRS2Q8WU20 508 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 ZMYND19Q96E35 227 aaPredicted RBP8.73□□□□□ -1.01
VPS13A-203ENST00000360280 CCDC74BQ96LY2 380 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 PGAP2Q9UHJ9 254 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 BLACEA4D250 179 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 ZNF587BE7ETH6 402 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 TUSC2O75896 110 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 TGM4P49221 684 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 SEMA4GQ9NTN9 838 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 NALCNQ8IZF0 1738 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 CBX7O95931 251 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 ACSM1Q08AH1 577 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 MRPL38Q96DV4 380 aaKnown RBP8.73□□□□□ -1.01
VPS13A-203ENST00000360280 CNIH4Q9P003 139 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 OMGP23515 440 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 SERINC2Q96SA4 455 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 HERPUD2Q9BSE4 406 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 URGCP-MRPS24S4R325 110 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 SPP1P10451 314 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 DEFA4P12838 97 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 IL2RGP31785 369 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 RPS26P11Q5JNZ5 115 aaPredicted RBP8.73□□□□□ -1.01
VPS13A-203ENST00000360280 CSNK1G3Q9Y6M4 447 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 ADH4P08319 380 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 DBHP09172 617 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 ACP2P11117 423 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 LIPCP11150 499 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 AADACP22760 399 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 BAMBIQ13145 260 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 CAMK2BQ13554 666 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 GRM2Q14416 872 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 PTPRCAPQ14761 206 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 SLC51BQ86UW2 128 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 WDR5BQ86VZ2 330 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 DCLRE1CQ96SD1 692 aaKnown RBP8.73□□□□□ -1.01
VPS13A-203ENST00000360280 DPH7Q9BTV6 452 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 TAF9BQ9HBM6 251 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 GPR34Q9UPC5 381 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 PLIN4Q96Q06 1357 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 HOXA10P31260 410 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms