RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 DEFB109BQ30KR1 87 aa12.12□□□□□ -0.47
NLRC3-202ENST00000359128 TMEM52BQ4KMG9 183 aa12.12□□□□□ -0.47
NLRC3-202ENST00000359128 DNAJC22Q8N4W6 341 aa12.12□□□□□ -0.47
NLRC3-202ENST00000359128 SHISA4Q96DD7 197 aa12.12□□□□□ -0.47
NLRC3-202ENST00000359128 LRFN1Q9P244 771 aa12.12□□□□□ -0.47
NLRC3-202ENST00000359128 ADAM29Q9UKF5 820 aa12.12□□□□□ -0.47
NLRC3-202ENST00000359128 GPR176Q14439 515 aa12.11□□□□□ -0.47
NLRC3-202ENST00000359128 GPR19Q15760 415 aa12.11□□□□□ -0.47
NLRC3-202ENST00000359128 GTDC1Q4AE62 458 aa12.11□□□□□ -0.47
NLRC3-202ENST00000359128 SCCPDHQ8NBX0 429 aa12.11□□□□□ -0.47
NLRC3-202ENST00000359128 ZNF420Q8TAQ5 688 aaPredicted RBP12.11□□□□□ -0.47
NLRC3-202ENST00000359128 LCORQ96JN0 433 aaPredicted RBP12.11□□□□□ -0.47
NLRC3-202ENST00000359128 GSTO2Q9H4Y5 243 aa12.11□□□□□ -0.47
NLRC3-202ENST00000359128 GNB4Q9HAV0 340 aa12.11□□□□□ -0.47
NLRC3-202ENST00000359128 HS3ST2Q9Y278 367 aa12.11□□□□□ -0.47
NLRC3-202ENST00000359128 PLEKHM1Q9Y4G2 1056 aa12.11□□□□□ -0.47
NLRC3-202ENST00000359128 NME7Q9Y5B8 376 aa12.11□□□□□ -0.47
NLRC3-202ENST00000359128 TMEM269A0A1B0GVZ9 245 aa12.11□□□□□ -0.47
NLRC3-202ENST00000359128 LCN8Q6JVE9 175 aa12.11□□□□□ -0.47
NLRC3-202ENST00000359128 CPEB3Q8NE35 698 aaKnown RBP12.11□□□□□ -0.47
NLRC3-202ENST00000359128 TP63Q9H3D4 680 aaPredicted RBP12.11□□□□□ -0.47
NLRC3-202ENST00000359128 YARS2Q9Y2Z4 477 aaKnown RBP12.11□□□□□ -0.47
NLRC3-202ENST00000359128 AK6Q9Y3D8 172 aaKnown RBP12.11□□□□□ -0.47
NLRC3-202ENST00000359128 GOLM1Q8NBJ4 401 aa12.11□□□□□ -0.47
NLRC3-202ENST00000359128 OR7G1Q8NGA0 311 aa12.11□□□□□ -0.47
NLRC3-202ENST00000359128 GOT1L1Q8NHS2 421 aaPredicted RBP12.11□□□□□ -0.47
NLRC3-202ENST00000359128 ASB11Q8WXH4 323 aa12.11□□□□□ -0.47
NLRC3-202ENST00000359128 MAELQ96JY0 434 aaKnown RBP12.11□□□□□ -0.47
NLRC3-202ENST00000359128 FIZ1Q96SL8 496 aa12.11□□□□□ -0.47
NLRC3-202ENST00000359128 ZIC5Q96T25 663 aa12.11□□□□□ -0.47
NLRC3-202ENST00000359128 SSX3Q99909 188 aa12.11□□□□□ -0.47
NLRC3-202ENST00000359128 EDEM2Q9BV94 578 aa12.11□□□□□ -0.47
NLRC3-202ENST00000359128 PBX4Q9BYU1 374 aa12.11□□□□□ -0.47
NLRC3-202ENST00000359128 HSPB11Q9Y547 144 aa12.11□□□□□ -0.47
NLRC3-202ENST00000359128 DVL2O14641 736 aa12.11□□□□□ -0.47
NLRC3-202ENST00000359128 BCAS1O75363 584 aaPredicted RBP12.11□□□□□ -0.47
NLRC3-202ENST00000359128 CXCR4P61073 352 aa12.11□□□□□ -0.47
NLRC3-202ENST00000359128 NDUFAF4Q9P032 175 aa12.11□□□□□ -0.47
NLRC3-202ENST00000359128 SURF4O15260 269 aa12.11□□□□□ -0.47
NLRC3-202ENST00000359128 HTR2AP28223 471 aa12.11□□□□□ -0.47
NLRC3-202ENST00000359128 TBRG1Q3YBR2 411 aa12.11□□□□□ -0.47
NLRC3-202ENST00000359128 TRUB1Q8WWH5 349 aaKnown RBP12.11□□□□□ -0.47
NLRC3-202ENST00000359128 FKRPQ9H9S5 495 aa12.11□□□□□ -0.47
NLRC3-202ENST00000359128 B3GAT1Q9P2W7 334 aa12.11□□□□□ -0.47
NLRC3-202ENST00000359128 I3L521 148 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 PAHP00439 452 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 SLC1A3P43003 542 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 F2RL1P55085 397 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 WNT4P56705 351 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 MRPL2Q5T653 305 aaKnown RBP12.1□□□□□ -0.47
NLRC3-202ENST00000359128 SLC6A19Q695T7 634 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 TSPYL5Q86VY4 417 aaPredicted RBP12.1□□□□□ -0.47
NLRC3-202ENST00000359128 OLAHQ9NV23 265 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 CXXC1Q9P0U4 656 aaPredicted RBP12.1□□□□□ -0.47
NLRC3-202ENST00000359128 G3V2L1 256 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 SOCS7O14512 581 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 HSPB6O14558 160 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 EIF1BO60739 113 aaKnown RBP12.1□□□□□ -0.47
NLRC3-202ENST00000359128 MMP12P39900 470 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 LTB4RQ15722 352 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 AGAP7PQ5VUJ5 663 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 ALKAL1Q6UXT8 129 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 OR1N1Q8NGS0 311 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 AGAP4Q96P64 663 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 FAM166BA8MTA8 275 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 H7C2Y5 167 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 TNFSF15O95150 251 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 IFNA10P01566 189 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 HSD17B1P14061 328 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 PTAFRP25105 342 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 EIF1P41567 113 aaKnown RBP12.1□□□□□ -0.47
NLRC3-202ENST00000359128 FOXA1P55317 472 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 IKZF1Q13422 519 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 FBXW12Q6X9E4 464 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 SERPINA11Q86U17 422 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 HSD17B8Q92506 261 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 UPRTQ96BW1 309 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 C4orf36Q96KX1 117 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 SLC46A1Q96NT5 459 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 MRI1Q9BV20 369 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 EGLN1Q9GZT9 426 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 TMEM45AQ9NWC5 275 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 A8MXE2 369 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 MITFO75030 526 aaPredicted RBP12.1□□□□□ -0.47
NLRC3-202ENST00000359128 TUSC2O75896 110 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 KCNJ10P78508 379 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 SCGB2A2Q13296 93 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 NDUFAF7Q7L592 441 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 ZFAND1Q8TCF1 268 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 SLC7A13Q8TCU3 470 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 DCUN1D4Q92564 292 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 POLE4Q9NR33 117 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 HHLA2Q9UM44 414 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 ATP23Q9Y6H3 246 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 PRAMEF27A3QJZ7 478 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 PRAMEF25A6NGN4 478 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 F13BP05160 661 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 FGF4P08620 206 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 CSF1P09603 554 aa12.1□□□□□ -0.47
NLRC3-202ENST00000359128 SRFP11831 508 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms