RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 SIRPAP78324 504 aa16.34■□□□□ 0.21
RTN4-204ENST00000357732 METTL11BQ5VVY1 283 aa16.34■□□□□ 0.21
RTN4-204ENST00000357732 UNQ9370/PRO34162Q6UXP9 181 aa16.34■□□□□ 0.21
RTN4-204ENST00000357732 GRAMD2AQ8IUY3 354 aa16.34■□□□□ 0.21
RTN4-204ENST00000357732 PIAS4Q8N2W9 510 aaPredicted RBP16.34■□□□□ 0.21
RTN4-204ENST00000357732 UXS1Q8NBZ7 420 aa16.34■□□□□ 0.21
RTN4-204ENST00000357732 OR51Q1Q8NH59 317 aa16.34■□□□□ 0.21
RTN4-204ENST00000357732 C15orf40Q8WUR7 153 aa16.34■□□□□ 0.21
RTN4-204ENST00000357732 SCARF2Q96GP6 870 aaPredicted RBP16.34■□□□□ 0.21
RTN4-204ENST00000357732 CNN2Q99439 309 aaKnown RBP16.34■□□□□ 0.21
RTN4-204ENST00000357732 MEPEQ9NQ76 525 aaPredicted RBP16.34■□□□□ 0.21
RTN4-204ENST00000357732 MAB21L2Q9Y586 359 aa16.34■□□□□ 0.21
RTN4-204ENST00000357732 A0A1B0GUH1 482 aa16.34■□□□□ 0.21
RTN4-204ENST00000357732 GKN3PP0CG01 181 aa16.34■□□□□ 0.21
RTN4-204ENST00000357732 SNRPBP14678 240 aaKnown RBP16.34■□□□□ 0.21
RTN4-204ENST00000357732 GDNFP39905 211 aa16.34■□□□□ 0.21
RTN4-204ENST00000357732 ZNF81P51508 661 aa16.34■□□□□ 0.21
RTN4-204ENST00000357732 CCR6P51684 374 aa16.34■□□□□ 0.21
RTN4-204ENST00000357732 CCR9P51686 369 aa16.34■□□□□ 0.21
RTN4-204ENST00000357732 CLDN2P57739 230 aa16.34■□□□□ 0.21
RTN4-204ENST00000357732 RPS21P63220 83 aaKnown RBP16.34■□□□□ 0.21
RTN4-204ENST00000357732 RPL6Q02878 288 aaKnown RBP16.34■□□□□ 0.21
RTN4-204ENST00000357732 RPTNQ6XPR3 784 aa16.34■□□□□ 0.21
RTN4-204ENST00000357732 ZNF687Q8N1G0 1237 aa16.34■□□□□ 0.21
RTN4-204ENST00000357732 DTX3Q8N9I9 347 aa16.34■□□□□ 0.21
RTN4-204ENST00000357732 C1QTNF7Q9BXJ2 289 aa16.34■□□□□ 0.21
RTN4-204ENST00000357732 ICAM5Q9UMF0 924 aa16.34■□□□□ 0.21
RTN4-204ENST00000357732 PLEKHM1Q9Y4G2 1056 aa16.34■□□□□ 0.21
RTN4-204ENST00000357732 A0A1W2PRG6 482 aa16.33■□□□□ 0.2
RTN4-204ENST00000357732 RFXAPO00287 272 aa16.33■□□□□ 0.2
RTN4-204ENST00000357732 BRINP1O60477 761 aa16.33■□□□□ 0.2
RTN4-204ENST00000357732 PPP1R3DO95685 299 aa16.33■□□□□ 0.2
RTN4-204ENST00000357732 POLR2CP19387 275 aaPredicted RBP16.33■□□□□ 0.2
RTN4-204ENST00000357732 LCN1P31025 176 aa16.33■□□□□ 0.2
RTN4-204ENST00000357732 MAP3K8P41279 467 aa16.33■□□□□ 0.2
RTN4-204ENST00000357732 SRP54P61011 504 aaKnown RBP16.33■□□□□ 0.2
RTN4-204ENST00000357732 LGALS3BPQ08380 585 aa16.33■□□□□ 0.2
RTN4-204ENST00000357732 EXOSC2Q13868 293 aaKnown RBP16.33■□□□□ 0.2
RTN4-204ENST00000357732 FGFBP1Q14512 234 aa16.33■□□□□ 0.2
RTN4-204ENST00000357732 ZSWIM7Q19AV6 140 aa16.33■□□□□ 0.2
RTN4-204ENST00000357732 PELI1Q96FA3 418 aa16.33■□□□□ 0.2
RTN4-204ENST00000357732 SPRTNQ9H040 489 aaPredicted RBP16.33■□□□□ 0.2
RTN4-204ENST00000357732 NARFLQ9H6Q4 476 aa16.33■□□□□ 0.2
RTN4-204ENST00000357732 OBP2AQ9NY56 170 aa16.33■□□□□ 0.2
RTN4-204ENST00000357732 SPEF1Q9Y4P9 236 aa16.33■□□□□ 0.2
RTN4-204ENST00000357732 GABARAPH6UMI1 98 aa16.33■□□□□ 0.2
RTN4-204ENST00000357732 PAK4O96013 591 aaPredicted RBP16.33■□□□□ 0.2
RTN4-204ENST00000357732 CPN1P15169 458 aa16.33■□□□□ 0.2
RTN4-204ENST00000357732 WASP42768 502 aa16.33■□□□□ 0.2
RTN4-204ENST00000357732 DHODHQ02127 395 aa16.33■□□□□ 0.2
RTN4-204ENST00000357732 BAMBIQ13145 260 aa16.33■□□□□ 0.2
RTN4-204ENST00000357732 SGCGQ13326 291 aa16.33■□□□□ 0.2
RTN4-204ENST00000357732 FGL2Q14314 439 aa16.33■□□□□ 0.2
RTN4-204ENST00000357732 NUDT18Q6ZVK8 323 aa16.33■□□□□ 0.2
RTN4-204ENST00000357732 UBE2Q1Q7Z7E8 422 aa16.33■□□□□ 0.2
RTN4-204ENST00000357732 LSRQ86X29 649 aaPredicted RBP16.33■□□□□ 0.2
RTN4-204ENST00000357732 ZNF671Q8TAW3 534 aa16.33■□□□□ 0.2
RTN4-204ENST00000357732 SP7Q8TDD2 431 aaPredicted RBP16.33■□□□□ 0.2
RTN4-204ENST00000357732 LCN9Q8WX39 176 aa16.33■□□□□ 0.2
RTN4-204ENST00000357732 RPS6KB2Q9UBS0 482 aa16.33■□□□□ 0.2
RTN4-204ENST00000357732 KCNE5Q9UJ90 142 aa16.33■□□□□ 0.2
RTN4-204ENST00000357732 MRPS7Q9Y2R9 242 aaKnown RBP16.33■□□□□ 0.2
RTN4-204ENST00000357732 SPACA6W5XKT8 324 aa16.33■□□□□ 0.2
RTN4-204ENST00000357732 TRAV27A0A087WT01 109 aa16.32■□□□□ 0.2
RTN4-204ENST00000357732 WNT1P04628 370 aa16.32■□□□□ 0.2
RTN4-204ENST00000357732 RRASP10301 218 aa16.32■□□□□ 0.2
RTN4-204ENST00000357732 PSMB1P20618 241 aaKnown RBP16.32■□□□□ 0.2
RTN4-204ENST00000357732 RPS11P62280 158 aaKnown RBP eCLIP16.32■□□□□ 0.2
RTN4-204ENST00000357732 POU6F2P78424 691 aaPredicted RBP16.32■□□□□ 0.2
RTN4-204ENST00000357732 PUDPQ08623 228 aa16.32■□□□□ 0.2
RTN4-204ENST00000357732 SLC35D3Q5M8T2 416 aa16.32■□□□□ 0.2
RTN4-204ENST00000357732 ABHD13Q7L211 337 aa16.32■□□□□ 0.2
RTN4-204ENST00000357732 OR6V1Q8N148 313 aa16.32■□□□□ 0.2
RTN4-204ENST00000357732 SPICQ8N5J4 248 aa16.32■□□□□ 0.2
RTN4-204ENST00000357732 RPS4Y2Q8TD47 263 aa16.32■□□□□ 0.2
RTN4-204ENST00000357732 SMARCD2Q92925 531 aa16.32■□□□□ 0.2
RTN4-204ENST00000357732 ARMC5Q96C12 935 aa16.32■□□□□ 0.2
RTN4-204ENST00000357732 PEX11GQ96HA9 241 aa16.32■□□□□ 0.2
RTN4-204ENST00000357732 ASB16Q96NS5 453 aa16.32■□□□□ 0.2
RTN4-204ENST00000357732 TRIM2Q9C040 744 aa16.32■□□□□ 0.2
RTN4-204ENST00000357732 SERGEFQ9UGK8 458 aa16.32■□□□□ 0.2
RTN4-204ENST00000357732 FBXL3Q9UKT7 428 aa16.32■□□□□ 0.2
RTN4-204ENST00000357732 GXYLT2A0PJZ3 443 aa16.31■□□□□ 0.2
RTN4-204ENST00000357732 PEX12O00623 359 aa16.31■□□□□ 0.2
RTN4-204ENST00000357732 TPD52L2O43399 206 aaKnown RBP16.31■□□□□ 0.2
RTN4-204ENST00000357732 TNFSF14O43557 240 aa16.31■□□□□ 0.2
RTN4-204ENST00000357732 MT-ND4P03905 459 aa16.31■□□□□ 0.2
RTN4-204ENST00000357732 ANKRD34CP0C6C1 535 aa16.31■□□□□ 0.2
RTN4-204ENST00000357732 PTNP21246 168 aa16.31■□□□□ 0.2
RTN4-204ENST00000357732 HOXD11P31277 338 aaPredicted RBP16.31■□□□□ 0.2
RTN4-204ENST00000357732 ENPP2Q13822 863 aa16.31■□□□□ 0.2
RTN4-204ENST00000357732 KIR2DS3Q14952 304 aa16.31■□□□□ 0.2
RTN4-204ENST00000357732 TRMT12Q53H54 448 aaKnown RBP16.31■□□□□ 0.2
RTN4-204ENST00000357732 SSX6Q7RTT6 188 aa16.31■□□□□ 0.2
RTN4-204ENST00000357732 COMMD7Q86VX2 200 aa16.31■□□□□ 0.2
RTN4-204ENST00000357732 LSMEM1Q8N8F7 131 aa16.31■□□□□ 0.2
RTN4-204ENST00000357732 OR4D9Q8NGE8 314 aa16.31■□□□□ 0.2
RTN4-204ENST00000357732 OR51A7Q8NH64 312 aa16.31■□□□□ 0.2
RTN4-204ENST00000357732 OR14A16Q8NHC5 309 aa16.31■□□□□ 0.2
RTN4-204ENST00000357732 LGALS14Q8TCE9 139 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms