RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 H0Y3Z8 333 aa22.9■■□□□ 1.26
SSBP3-202ENST00000357475 SUSD5O60279 629 aa22.9■■□□□ 1.26
SSBP3-202ENST00000357475 ADH6P28332 368 aa22.9■■□□□ 1.26
SSBP3-202ENST00000357475 APOBEC1P41238 236 aaKnown RBP22.9■■□□□ 1.26
SSBP3-202ENST00000357475 EGR4Q05215 589 aa22.9■■□□□ 1.26
SSBP3-202ENST00000357475 C19orf57Q0VDD7 668 aa22.9■■□□□ 1.26
SSBP3-202ENST00000357475 LAPTM4AQ15012 233 aa22.9■■□□□ 1.26
SSBP3-202ENST00000357475 SEC23BQ15437 767 aa22.9■■□□□ 1.26
SSBP3-202ENST00000357475 ELOA3BQ3SY89 546 aa22.9■■□□□ 1.26
SSBP3-202ENST00000357475 C1QL3Q5VWW1 255 aa22.9■■□□□ 1.26
SSBP3-202ENST00000357475 TMEM179BQ7Z7N9 219 aa22.9■■□□□ 1.26
SSBP3-202ENST00000357475 ELOA3Q8NG57 546 aa22.9■■□□□ 1.26
SSBP3-202ENST00000357475 NEIL3Q8TAT5 605 aa22.9■■□□□ 1.26
SSBP3-202ENST00000357475 SMPDL3BQ92485 455 aa22.9■■□□□ 1.26
SSBP3-202ENST00000357475 NR4A3Q92570 626 aa22.9■■□□□ 1.26
SSBP3-202ENST00000357475 BARD1Q99728 777 aaKnown RBP22.9■■□□□ 1.26
SSBP3-202ENST00000357475 FUZQ9BT04 418 aa22.9■■□□□ 1.26
SSBP3-202ENST00000357475 LDAHQ9H6V9 325 aa22.9■■□□□ 1.26
SSBP3-202ENST00000357475 AGPAT4Q9NRZ5 378 aa22.9■■□□□ 1.26
SSBP3-202ENST00000357475 CHRNA9Q9UGM1 479 aa22.9■■□□□ 1.26
SSBP3-202ENST00000357475 LYVE1Q9Y5Y7 322 aa22.9■■□□□ 1.26
SSBP3-202ENST00000357475 H0YC42 278 aa22.89■■□□□ 1.26
SSBP3-202ENST00000357475 H0YHG0 523 aa22.89■■□□□ 1.26
SSBP3-202ENST00000357475 CLOCKO15516 846 aa22.89■■□□□ 1.26
SSBP3-202ENST00000357475 HNRNPRO43390 633 aaKnown RBP22.89■■□□□ 1.26
SSBP3-202ENST00000357475 GADD45GO95257 159 aa22.89■■□□□ 1.26
SSBP3-202ENST00000357475 CXCR1P25024 350 aa22.89■■□□□ 1.26
SSBP3-202ENST00000357475 HTR3AP46098 478 aa22.89■■□□□ 1.26
SSBP3-202ENST00000357475 UGT2B15P54855 530 aa22.89■■□□□ 1.26
SSBP3-202ENST00000357475 MLLT10P55197 1068 aa22.89■■□□□ 1.26
SSBP3-202ENST00000357475 TPD52P55327 224 aaPredicted RBP22.89■■□□□ 1.26
SSBP3-202ENST00000357475 TRAM2Q15035 370 aa22.89■■□□□ 1.26
SSBP3-202ENST00000357475 FGD3Q5JSP0 725 aa22.89■■□□□ 1.26
SSBP3-202ENST00000357475 SWT1Q5T5J6 900 aaKnown RBP22.89■■□□□ 1.26
SSBP3-202ENST00000357475 PODNL1Q6PEZ8 512 aa22.89■■□□□ 1.26
SSBP3-202ENST00000357475 OR4C15Q8NGM1 316 aa22.89■■□□□ 1.26
SSBP3-202ENST00000357475 SLC7A13Q8TCU3 470 aa22.89■■□□□ 1.26
SSBP3-202ENST00000357475 FAR1Q8WVX9 515 aa22.89■■□□□ 1.26
SSBP3-202ENST00000357475 SEMA6AQ9H2E6 1030 aa22.89■■□□□ 1.26
SSBP3-202ENST00000357475 YY1AP1Q9H869 796 aa22.89■■□□□ 1.26
SSBP3-202ENST00000357475 PLSCR2Q9NRY7 297 aa22.89■■□□□ 1.26
SSBP3-202ENST00000357475 SELENONQ9NZV5 590 aa22.89■■□□□ 1.26
SSBP3-202ENST00000357475 TTLL8A6PVC2 850 aa22.88■■□□□ 1.25
SSBP3-202ENST00000357475 PIP5K1CO60331 668 aa22.88■■□□□ 1.25
SSBP3-202ENST00000357475 PNMTP11086 282 aa22.88■■□□□ 1.25
SSBP3-202ENST00000357475 BMP7P18075 431 aa22.88■■□□□ 1.25
SSBP3-202ENST00000357475 SFTPDP35247 375 aa22.88■■□□□ 1.25
SSBP3-202ENST00000357475 LIMS1P48059 325 aa22.88■■□□□ 1.25
SSBP3-202ENST00000357475 TDGF1P3P51864 188 aa22.88■■□□□ 1.25
SSBP3-202ENST00000357475 CLDN20P56880 219 aa22.88■■□□□ 1.25
SSBP3-202ENST00000357475 ATP6AP1Q15904 470 aa22.88■■□□□ 1.25
SSBP3-202ENST00000357475 EXOC3L2Q2M3D2 409 aa22.88■■□□□ 1.25
SSBP3-202ENST00000357475 AAGABQ6PD74 315 aa22.88■■□□□ 1.25
SSBP3-202ENST00000357475 MEX3DQ86XN8 651 aaKnown RBP22.88■■□□□ 1.25
SSBP3-202ENST00000357475 ZNF426Q9BUY5 554 aa22.88■■□□□ 1.25
SSBP3-202ENST00000357475 EXO5Q9H790 373 aa22.88■■□□□ 1.25
SSBP3-202ENST00000357475 C12orf10Q9HB07 376 aa22.88■■□□□ 1.25
SSBP3-202ENST00000357475 DNAJB9Q9UBS3 223 aa22.88■■□□□ 1.25
SSBP3-202ENST00000357475 A0A1W2PRQ8 180 aa22.87■■□□□ 1.25
SSBP3-202ENST00000357475 KPNA4O00629 521 aaPredicted RBP22.87■■□□□ 1.25
SSBP3-202ENST00000357475 THRBP10828 461 aa22.87■■□□□ 1.25
SSBP3-202ENST00000357475 HOXB6P17509 224 aaKnown RBP22.87■■□□□ 1.25
SSBP3-202ENST00000357475 FASP25445 335 aa22.87■■□□□ 1.25
SSBP3-202ENST00000357475 SELENBP1Q13228 472 aa22.87■■□□□ 1.25
SSBP3-202ENST00000357475 DGCR6Q14129 220 aa22.87■■□□□ 1.25
SSBP3-202ENST00000357475 RCN1Q15293 331 aa22.87■■□□□ 1.25
SSBP3-202ENST00000357475 C3AR1Q16581 482 aa22.87■■□□□ 1.25
SSBP3-202ENST00000357475 FGD2Q7Z6J4 655 aa22.87■■□□□ 1.25
SSBP3-202ENST00000357475 HS3ST5Q8IZT8 346 aa22.87■■□□□ 1.25
SSBP3-202ENST00000357475 PFN4Q8NHR9 129 aa22.87■■□□□ 1.25
SSBP3-202ENST00000357475 DTNBP1Q96EV8 351 aa22.87■■□□□ 1.25
SSBP3-202ENST00000357475 ARL5BQ96KC2 179 aa22.87■■□□□ 1.25
SSBP3-202ENST00000357475 GPR137Q96N19 417 aa22.87■■□□□ 1.25
SSBP3-202ENST00000357475 SAMHD1Q9Y3Z3 626 aaKnown RBP22.87■■□□□ 1.25
SSBP3-202ENST00000357475 A0A087WUU8 490 aa22.87■■□□□ 1.25
SSBP3-202ENST00000357475 A0A1B0GTH9 108 aa22.87■■□□□ 1.25
SSBP3-202ENST00000357475 TNFRSF11BO00300 401 aa22.87■■□□□ 1.25
SSBP3-202ENST00000357475 ADAMDEC1O15204 470 aa22.87■■□□□ 1.25
SSBP3-202ENST00000357475 LDLRP01130 860 aa22.87■■□□□ 1.25
SSBP3-202ENST00000357475 CHMP24386 653 aa22.87■■□□□ 1.25
SSBP3-202ENST00000357475 ELK4P28324 431 aa22.87■■□□□ 1.25
SSBP3-202ENST00000357475 LHX2P50458 406 aa22.87■■□□□ 1.25
SSBP3-202ENST00000357475 SUCLG1P53597 346 aaKnown RBP22.87■■□□□ 1.25
SSBP3-202ENST00000357475 CLDN15P56746 228 aa22.87■■□□□ 1.25
SSBP3-202ENST00000357475 C3orf33Q6P1S2 294 aa22.87■■□□□ 1.25
SSBP3-202ENST00000357475 GGNQ86UU5 652 aa22.87■■□□□ 1.25
SSBP3-202ENST00000357475 CHERPQ8IWX8 916 aaKnown RBP22.87■■□□□ 1.25
SSBP3-202ENST00000357475 C10orf67Q8IYJ2 551 aa22.87■■□□□ 1.25
SSBP3-202ENST00000357475 REEP1Q9H902 201 aa22.87■■□□□ 1.25
SSBP3-202ENST00000357475 MEPEQ9NQ76 525 aaPredicted RBP22.87■■□□□ 1.25
SSBP3-202ENST00000357475 MAGED1Q9Y5V3 778 aaPredicted RBP22.87■■□□□ 1.25
SSBP3-202ENST00000357475 SHANK1Q9Y566 2161 aa22.86■■□□□ 1.25
SSBP3-202ENST00000357475 A0A1B0GVC2 190 aa22.86■■□□□ 1.25
SSBP3-202ENST00000357475 A0A1W2PNR3 127 aa22.86■■□□□ 1.25
SSBP3-202ENST00000357475 GNGT2O14610 69 aa22.86■■□□□ 1.25
SSBP3-202ENST00000357475 BAG2O95816 211 aa22.86■■□□□ 1.25
SSBP3-202ENST00000357475 POU3F2P20265 443 aaPredicted RBP22.86■■□□□ 1.25
SSBP3-202ENST00000357475 IFNA8P32881 189 aa22.86■■□□□ 1.25
SSBP3-202ENST00000357475 HMGA2P52926 109 aa22.86■■□□□ 1.25
SSBP3-202ENST00000357475 CRYZQ08257 329 aaKnown RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms