RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 SLC10A1Q14973 349 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 GOT1L1Q8NHS2 421 aaPredicted RBP6.85□□□□□ -1.31
VPS13A-202ENST00000357409 HPSE2Q8WWQ2 592 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 FER1L6-AS2Q96M78 137 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 SLC31A2O15432 143 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 COX20Q5RI15 118 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 PAQR9Q6ZVX9 377 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 RELL1Q8IUW5 271 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 MINDY1Q8N5J2 469 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 LGALS12Q96DT0 336 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 ASF1BQ9NVP2 202 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 SPHK1Q9NYA1 384 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 TMPRSS11EQ9UL52 423 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 OR51B4Q9Y5P0 310 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 M6PRP20645 277 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 PROZP22891 400 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 CD34P28906 385 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 CDAP32320 146 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 DCCP43146 1447 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 TSFMP43897 325 aaKnown RBP6.84□□□□□ -1.31
VPS13A-202ENST00000357409 HOXA1P49639 335 aaPredicted RBP6.84□□□□□ -1.31
VPS13A-202ENST00000357409 TPMTP51580 245 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 MTCP1P56278 107 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 CXADRP78310 365 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 RNASE10Q5GAN6 216 aaKnown RBP6.84□□□□□ -1.31
VPS13A-202ENST00000357409 CTSL3PQ5NE16 218 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 TVP23CQ96ET8 276 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 ABCG5Q9H222 651 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 TBC1D29Q9UFV1 150 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 PATE3B3GLJ2 98 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 EEDO75530 441 aaKnown RBP6.84□□□□□ -1.31
VPS13A-202ENST00000357409 PRLP01236 227 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 CYP1B1Q16678 543 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 PHLDA2Q53GA4 152 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 DNAJC5GQ8N7S2 189 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 ZNF511Q8NB15 262 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 OR2T4Q8NH00 348 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 TXNDC15Q96J42 360 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 LRIG1Q96JA1 1093 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 MED18Q9BUE0 208 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 VAPAQ9P0L0 249 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 PCDHGB2Q9Y5G2 931 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 AGAP5A6NIR3 686 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 APOC3P02656 99 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 CAPN3P20807 821 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 IDH3GP51553 393 aaPredicted RBP6.84□□□□□ -1.31
VPS13A-202ENST00000357409 GSG1LQ6UXU4 331 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 PFN4Q8NHR9 129 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 UTP4Q969X6 686 aaKnown RBP6.84□□□□□ -1.31
VPS13A-202ENST00000357409 DUSP23Q9BVJ7 150 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 TMEM59Q9BXS4 323 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 DMRT3Q9NQL9 472 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 PDLIM7Q9NR12 457 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 QPCTLQ9NXS2 382 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 ING1Q9UK53 422 aaPredicted RBP6.84□□□□□ -1.31
VPS13A-202ENST00000357409 DVL1O14640 695 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 HMGCLP35914 325 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 DVL1P1P54792 670 aaPredicted RBP6.84□□□□□ -1.31
VPS13A-202ENST00000357409 GRPEL2Q8TAA5 225 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 TMEM255BQ8WV15 326 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 RHBDF1Q96CC6 855 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 BPIFA2Q96DR5 249 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 SCGB3A2Q96PL1 93 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 SLC30A2Q9BRI3 323 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 ATP13A2Q9NQ11 1180 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 NXT1Q9UKK6 140 aaKnown RBP6.84□□□□□ -1.31
VPS13A-202ENST00000357409 TMED5Q9Y3A6 229 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 CCSO14618 274 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 ITGB2P05107 769 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 PIGAP37287 484 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 PTP4A2Q12974 167 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 ALG8Q9BVK2 526 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 IL17CQ9P0M4 197 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 OSGIN2Q9Y236 505 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 EMC9Q9Y3B6 208 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 LRRC42Q9Y546 428 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 DENRO43583 198 aaKnown RBP6.84□□□□□ -1.31
VPS13A-202ENST00000357409 EIF4EP06730 217 aaKnown RBP6.84□□□□□ -1.31
VPS13A-202ENST00000357409 SDC1P18827 310 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 TAZQ16635 292 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 GRHL2Q6ISB3 625 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 GFRALQ6UXV0 394 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 RASD2Q96D21 266 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 EXOSC1Q9Y3B2 195 aaKnown RBP6.84□□□□□ -1.31
VPS13A-202ENST00000357409 AQP7P3A6NL99 342 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 NCBP2LA6PVI3 153 aaKnown RBP6.84□□□□□ -1.31
VPS13A-202ENST00000357409 GSRP00390 522 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 MC2RQ01718 297 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 FBXO43Q4G163 708 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 SLC6A19Q695T7 634 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 OR52E8Q6IFG1 317 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 OR13C9Q8NGT0 318 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 EAF1Q96JC9 268 aaPredicted RBP6.84□□□□□ -1.31
VPS13A-202ENST00000357409 WDR83Q9BRX9 315 aaKnown RBP6.84□□□□□ -1.31
VPS13A-202ENST00000357409 CGGBP1Q9UFW8 167 aaPredicted RBP6.84□□□□□ -1.31
VPS13A-202ENST00000357409 FBXL2Q9UKC9 423 aa6.84□□□□□ -1.31
VPS13A-202ENST00000357409 INTS6Q9UL03 887 aaKnown RBP6.84□□□□□ -1.31
VPS13A-202ENST00000357409 COA3Q9Y2R0 106 aaPredicted RBP6.84□□□□□ -1.31
VPS13A-202ENST00000357409 CDC42BPAQ5VT25 1732 aa6.84□□□□□ -1.32
VPS13A-202ENST00000357409 BOLA2-SMG1P6H3BVE0 249 aa6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms