RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 LILRB1Q8NHL6 650 aaPredicted RBP9.43□□□□□ -0.9
CAPN3-204ENST00000356316 PIGXQ8TBF5 258 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 PMM1Q92871 262 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 NEUROG1Q92886 237 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 APH1AQ96BI3 265 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 ZNF524Q96C55 264 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 DDIT4LQ96D03 193 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 NEURL3Q96EH8 262 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 HS6ST2Q96MM7 605 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 PANX1Q96RD7 426 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 NUF2Q9BZD4 464 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 MTHFD2LQ9H903 347 aaPredicted RBP9.43□□□□□ -0.9
CAPN3-204ENST00000356316 CTPS2Q9NRF8 586 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 ASB6Q9NWX5 421 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 CHRNA9Q9UGM1 479 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 POU2F3Q9UKI9 436 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 MGAT4BQ9UQ53 548 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 HDGFL3Q9Y3E1 203 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 MAGED1Q9Y5V3 778 aaPredicted RBP9.43□□□□□ -0.9
CAPN3-204ENST00000356316 NSD1Q96L73 2696 aaPredicted RBP9.42□□□□□ -0.9
CAPN3-204ENST00000356316 FREM1Q5H8C1 2179 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 CENPVL1A0A0U1RR11 272 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 CCDC154A6NI56 674 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 OR5H1A6NKK0 313 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 INAFM1C9JVW0 142 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 RNF223E7ERA6 249 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 E9PBE3 544 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 OVOL3O00110 214 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 ABCD4O14678 606 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 DNPH1O43598 174 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 KIAA0513O60268 411 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 PMS2P2O95744 297 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 SOD3P08294 240 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 DANCRP0C864 163 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 IL7RP16871 459 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 BGNP21810 368 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 IGHV1-2P23083 117 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 CDKN1AP38936 164 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 NME5P56597 212 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 TXNL4AP83876 142 aaKnown RBP9.42□□□□□ -0.9
CAPN3-204ENST00000356316 CHRNEQ04844 493 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 SPANXN4Q5MJ08 99 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 HHATQ5VTY9 493 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 OR7E24Q6IFN5 339 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 BRICD5Q6PL45 260 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 SLC22A25Q6T423 547 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 TMEM108Q6UXF1 575 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 SPATA19Q7Z5L4 167 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 CMIPQ8IY22 773 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 MREGQ8N565 214 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 KBTBD8Q8NFY9 601 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 ZNF75CPQ92670 426 aaPredicted RBP9.42□□□□□ -0.9
CAPN3-204ENST00000356316 ZG16BQ96DA0 208 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 TRNT1Q96Q11 434 aaKnown RBP9.42□□□□□ -0.9
CAPN3-204ENST00000356316 OR52E6Q96RD3 313 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 ZBTB18Q99592 522 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 NAA11Q9BSU3 229 aaPredicted RBP9.42□□□□□ -0.9
CAPN3-204ENST00000356316 CCDC106Q9BWC9 280 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 REG4Q9BYZ8 158 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 SAP130Q9H0E3 1048 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 BARX1Q9HBU1 254 aaPredicted RBP9.42□□□□□ -0.9
CAPN3-204ENST00000356316 EXOSC3Q9NQT5 275 aaKnown RBP9.42□□□□□ -0.9
CAPN3-204ENST00000356316 PNPOQ9NVS9 261 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 PARPBPQ9NWS1 579 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 TMEM181Q9P2C4 612 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 UPB1Q9UBR1 384 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 BTNL2Q9UIR0 455 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 ING1Q9UK53 422 aaPredicted RBP9.42□□□□□ -0.9
CAPN3-204ENST00000356316 TRAPPC4Q9Y296 219 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 ZANQ9Y493 2812 aa9.42□□□□□ -0.9
CAPN3-204ENST00000356316 IGKV3D-15A0A087WSY6 115 aa9.41□□□□□ -0.9
CAPN3-204ENST00000356316 TMED7-TICAM2A0A0A6YYA0 188 aa9.41□□□□□ -0.9
CAPN3-204ENST00000356316 EIF1BO60739 113 aaKnown RBP9.41□□□□□ -0.9
CAPN3-204ENST00000356316 RAMP1O60894 148 aa9.41□□□□□ -0.9
CAPN3-204ENST00000356316 SCN2BO60939 215 aa9.41□□□□□ -0.9
CAPN3-204ENST00000356316 RAD51DO75771 328 aa9.41□□□□□ -0.9
CAPN3-204ENST00000356316 PGM3O95394 542 aa9.41□□□□□ -0.9
CAPN3-204ENST00000356316 IGHV3-9P01782 118 aa9.41□□□□□ -0.9
CAPN3-204ENST00000356316 NR2F1P10589 423 aa9.41□□□□□ -0.9
CAPN3-204ENST00000356316 COX5AP20674 150 aa9.41□□□□□ -0.9
CAPN3-204ENST00000356316 PTAFRP25105 342 aa9.41□□□□□ -0.9
CAPN3-204ENST00000356316 POLR2HP52434 150 aaKnown RBP9.41□□□□□ -0.9
CAPN3-204ENST00000356316 MAP2K6P52564 334 aa9.41□□□□□ -0.9
CAPN3-204ENST00000356316 CDH11P55287 796 aa9.41□□□□□ -0.9
CAPN3-204ENST00000356316 PHC1P78364 1004 aa9.41□□□□□ -0.9
CAPN3-204ENST00000356316 SLC35A1P78382 337 aa9.41□□□□□ -0.9
CAPN3-204ENST00000356316 CEP85LQ5SZL2 805 aa9.41□□□□□ -0.9
CAPN3-204ENST00000356316 AP1ARQ63HQ0 302 aa9.41□□□□□ -0.9
CAPN3-204ENST00000356316 FRRS1Q6ZNA5 592 aa9.41□□□□□ -0.9
CAPN3-204ENST00000356316 HMGN2P46Q86SG4 172 aa9.41□□□□□ -0.9
CAPN3-204ENST00000356316 RNF130Q86XS8 419 aa9.41□□□□□ -0.9
CAPN3-204ENST00000356316 ADGRG3Q86Y34 549 aa9.41□□□□□ -0.9
CAPN3-204ENST00000356316 ZNF433Q8N7K0 673 aaPredicted RBP9.41□□□□□ -0.9
CAPN3-204ENST00000356316 FAM71CQ8NEG0 241 aa9.41□□□□□ -0.9
CAPN3-204ENST00000356316 OR52N5Q8NH56 324 aa9.41□□□□□ -0.9
CAPN3-204ENST00000356316 DNAJA3Q96EY1 480 aa9.41□□□□□ -0.9
CAPN3-204ENST00000356316 ADAD1Q96M93 576 aaKnown RBP9.41□□□□□ -0.9
CAPN3-204ENST00000356316 CCDC115Q96NT0 180 aa9.41□□□□□ -0.9
CAPN3-204ENST00000356316 TRIM2Q9C040 744 aa9.41□□□□□ -0.9
CAPN3-204ENST00000356316 C20orf27Q9GZN8 174 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms