RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 PIPOXQ9P0Z9 390 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 NTMQ9P121 344 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 ZNF780BQ9Y6R6 833 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 C17orf113A0A1B0GUU1 675 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 MOSPD3O75425 235 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 PLATP00750 562 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 PSMB1P20618 241 aaKnown RBP9.36□□□□□ -0.91
PTPRA-203ENST00000356147 EDNRAP25101 427 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 SOX2P48431 317 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 MAZP56270 477 aaKnown RBP9.36□□□□□ -0.91
PTPRA-203ENST00000356147 PLA2G7Q13093 441 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 KCNAB1Q14722 419 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 MLC1Q15049 377 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 HEPHL1Q6MZM0 1159 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 PXKQ7Z7A4 578 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 OR5M1Q8NGP8 315 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 OR8K3Q8NH51 312 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 OR4C6Q8NH72 309 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 LHFPL5Q8TAF8 219 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 RELTQ969Z4 430 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 ACTRT3Q9BYD9 372 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 REG4Q9BYZ8 158 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 PPA2Q9H2U2 334 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 MCCC2Q9HCC0 563 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 MEPEQ9NQ76 525 aaPredicted RBP9.36□□□□□ -0.91
PTPRA-203ENST00000356147 MED17Q9NVC6 651 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 KCNE5Q9UJ90 142 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 ADAM18Q9Y3Q7 739 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 SLC22A23A1A5C7 686 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 OTOL1A6NHN0 477 aaPredicted RBP9.36□□□□□ -0.91
PTPRA-203ENST00000356147 RPP14O95059 124 aaKnown RBP9.36□□□□□ -0.91
PTPRA-203ENST00000356147 PRKACAP17612 351 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 VIPR2P41587 438 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 GBX2P52951 348 aaPredicted RBP9.36□□□□□ -0.91
PTPRA-203ENST00000356147 DHCR24Q15392 516 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 TMEM44Q2T9K0 475 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 DMKNQ6E0U4 476 aaPredicted RBP9.36□□□□□ -0.91
PTPRA-203ENST00000356147 FGD2Q7Z6J4 655 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 UBE2Q1Q7Z7E8 422 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 FAM98AQ8NCA5 519 aaKnown RBP9.36□□□□□ -0.91
PTPRA-203ENST00000356147 SNX33Q8WV41 574 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 SMIM4Q8WVI0 70 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 DNAJA3Q96EY1 480 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 TSPAN10Q9H1Z9 355 aaPredicted RBP9.36□□□□□ -0.91
PTPRA-203ENST00000356147 IL21RQ9HBE5 538 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 HMX1Q9NP08 348 aaPredicted RBP9.36□□□□□ -0.91
PTPRA-203ENST00000356147 ST6GALNAC2Q9UJ37 374 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 CES1P1Q9UKY3 287 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 REV3LO60673 3130 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 SLC22A31A6NKX4 558 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 ANXA2P2A6NMY6 339 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 RIIAD1A6NNX1 92 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 LDB3O75112 727 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 CLEC3AO75596 197 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 SPDEFO95238 335 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 PAK4O96013 591 aaPredicted RBP9.36□□□□□ -0.91
PTPRA-203ENST00000356147 NMBP08949 121 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 LAMP2P13473 410 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 GLULP15104 373 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 PRKAR1BP31321 381 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 PITPNAQ00169 270 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 SREBF2Q12772 1141 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 YOD1Q5VVQ6 348 aaPredicted RBP9.36□□□□□ -0.91
PTPRA-203ENST00000356147 METRNLQ641Q3 311 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 MFSD12Q6NUT3 480 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 ZNF613Q6PF04 617 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 TMEM64Q6YI46 380 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 ZAR1Q86SH2 424 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 OR6K6Q8NGW6 343 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 C1orf216Q8TAB5 229 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 HAVCR2Q8TDQ0 301 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 CXorf40AQ8TE69 158 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 ZNF514Q96K75 400 aaPredicted RBP9.36□□□□□ -0.91
PTPRA-203ENST00000356147 LINC00615Q96LM1 132 aaPredicted RBP9.36□□□□□ -0.91
PTPRA-203ENST00000356147 ZNF681Q96N22 645 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 ARL6Q9H0F7 186 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 TTYH1Q9H313 450 aaPredicted RBP9.36□□□□□ -0.91
PTPRA-203ENST00000356147 LYARQ9NX58 379 aaKnown RBP9.36□□□□□ -0.91
PTPRA-203ENST00000356147 GPR34Q9UPC5 381 aa9.36□□□□□ -0.91
PTPRA-203ENST00000356147 KIAA1549LQ6ZVL6 1849 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 A0A1B0GTH9 108 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 PIN1P1O15428 100 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 SELENOFO60613 162 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 SC5DO75845 299 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 FGF18O76093 207 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 APOC3P02656 99 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 RLN1P04808 185 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 RHOP08100 348 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 BMP8BP34820 402 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 NRG3P56975 720 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 SHC2P98077 582 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 CDK3Q00526 305 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 SRSF5Q13243 272 aaKnown RBP9.35□□□□□ -0.91
PTPRA-203ENST00000356147 EXOSC7Q15024 291 aaKnown RBP9.35□□□□□ -0.91
PTPRA-203ENST00000356147 DEFB134Q4QY38 66 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 HSD17B12Q53GQ0 312 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 NHLRC3Q5JS37 347 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 PLPP4Q5VZY2 271 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 BMP8AQ7Z5Y6 402 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 TPRA1Q86W33 373 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms