RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 CTRB1P17538 263 aa12.6□□□□□ -0.39
TRIM4-203ENST00000355947 ACHEP22303 614 aa12.6□□□□□ -0.39
TRIM4-203ENST00000355947 FPR3P25089 353 aa12.6□□□□□ -0.39
TRIM4-203ENST00000355947 CTRB2Q6GPI1 263 aa12.6□□□□□ -0.39
TRIM4-203ENST00000355947 RANBP3LQ86VV4 465 aaPredicted RBP12.6□□□□□ -0.39
TRIM4-203ENST00000355947 TRMT2BQ96GJ1 504 aaKnown RBP12.6□□□□□ -0.39
TRIM4-203ENST00000355947 LIN7BQ9HAP6 207 aa12.6□□□□□ -0.39
TRIM4-203ENST00000355947 IFT46Q9NQC8 304 aa12.6□□□□□ -0.39
TRIM4-203ENST00000355947 GPR160Q9UJ42 338 aa12.6□□□□□ -0.39
TRIM4-203ENST00000355947 SELENOFO60613 162 aa12.6□□□□□ -0.39
TRIM4-203ENST00000355947 CTSAP10619 480 aa12.6□□□□□ -0.39
TRIM4-203ENST00000355947 HIST1H1TP22492 207 aaPredicted RBP12.6□□□□□ -0.39
TRIM4-203ENST00000355947 CSNK1G2P78368 415 aa12.6□□□□□ -0.39
TRIM4-203ENST00000355947 SQSTM1Q13501 440 aa12.6□□□□□ -0.39
TRIM4-203ENST00000355947 GPNMBQ14956 572 aa12.6□□□□□ -0.39
TRIM4-203ENST00000355947 MAPK14Q16539 360 aa12.6□□□□□ -0.39
TRIM4-203ENST00000355947 PCGF3Q3KNV8 242 aa12.6□□□□□ -0.39
TRIM4-203ENST00000355947 MRPL2Q5T653 305 aaKnown RBP12.6□□□□□ -0.39
TRIM4-203ENST00000355947 SLC22A10Q63ZE4 541 aa12.6□□□□□ -0.39
TRIM4-203ENST00000355947 WDR88Q6ZMY6 472 aa12.6□□□□□ -0.39
TRIM4-203ENST00000355947 MBOAT2Q6ZWT7 520 aa12.6□□□□□ -0.39
TRIM4-203ENST00000355947 LRRC56Q8IYG6 542 aaPredicted RBP12.6□□□□□ -0.39
TRIM4-203ENST00000355947 RAB42Q8N4Z0 105 aa12.6□□□□□ -0.39
TRIM4-203ENST00000355947 DUSP19Q8WTR2 217 aa12.6□□□□□ -0.39
TRIM4-203ENST00000355947 SEC22AQ96IW7 307 aa12.6□□□□□ -0.39
TRIM4-203ENST00000355947 TSSK2Q96PF2 358 aa12.6□□□□□ -0.39
TRIM4-203ENST00000355947 ULBP3Q9BZM4 244 aa12.6□□□□□ -0.39
TRIM4-203ENST00000355947 C11orf49Q9H6J7 331 aa12.6□□□□□ -0.39
TRIM4-203ENST00000355947 C12orf10Q9HB07 376 aa12.6□□□□□ -0.39
TRIM4-203ENST00000355947 IL20Q9NYY1 176 aa12.6□□□□□ -0.39
TRIM4-203ENST00000355947 KCMF1Q9P0J7 381 aa12.6□□□□□ -0.39
TRIM4-203ENST00000355947 COPZ2Q9P299 210 aa12.6□□□□□ -0.39
TRIM4-203ENST00000355947 TRMT12Q53H54 448 aaKnown RBP12.59□□□□□ -0.39
TRIM4-203ENST00000355947 LCTLQ6UWM7 567 aa12.59□□□□□ -0.39
TRIM4-203ENST00000355947 ZNF836Q6ZNA1 936 aa12.59□□□□□ -0.39
TRIM4-203ENST00000355947 LINC01555Q8NAE3 123 aa12.59□□□□□ -0.39
TRIM4-203ENST00000355947 OR11G2Q8NGC1 345 aa12.59□□□□□ -0.39
TRIM4-203ENST00000355947 OR56A1Q8NGH5 318 aa12.59□□□□□ -0.39
TRIM4-203ENST00000355947 ARRDC3Q96B67 414 aa12.59□□□□□ -0.39
TRIM4-203ENST00000355947 ADAT1Q9BUB4 502 aaKnown RBP12.59□□□□□ -0.39
TRIM4-203ENST00000355947 C1QTNF2Q9BXJ5 285 aa12.59□□□□□ -0.39
TRIM4-203ENST00000355947 ZNF768Q9H5H4 540 aaKnown RBP12.59□□□□□ -0.39
TRIM4-203ENST00000355947 MLXQ9UH92 298 aa12.59□□□□□ -0.39
TRIM4-203ENST00000355947 FARSAQ9Y285 508 aaKnown RBP12.59□□□□□ -0.39
TRIM4-203ENST00000355947 ZNF443Q9Y2A4 671 aaPredicted RBP12.59□□□□□ -0.39
TRIM4-203ENST00000355947 MED31Q9Y3C7 131 aa12.59□□□□□ -0.39
TRIM4-203ENST00000355947 IER3IP1Q9Y5U9 82 aa12.59□□□□□ -0.39
TRIM4-203ENST00000355947 PLXNA3P51805 1871 aa12.59□□□□□ -0.39
TRIM4-203ENST00000355947 SLC22A23A1A5C7 686 aa12.59□□□□□ -0.39
TRIM4-203ENST00000355947 LRIT2A6NDA9 550 aa12.59□□□□□ -0.39
TRIM4-203ENST00000355947 TBC1D3BA6NDS4 549 aa12.59□□□□□ -0.39
TRIM4-203ENST00000355947 MAN2B1O00754 1011 aa12.59□□□□□ -0.39
TRIM4-203ENST00000355947 ARL6IP5O75915 188 aa12.59□□□□□ -0.39
TRIM4-203ENST00000355947 GUCA2AQ02747 115 aa12.59□□□□□ -0.39
TRIM4-203ENST00000355947 DUSP5Q16690 384 aa12.59□□□□□ -0.39
TRIM4-203ENST00000355947 LRFN4Q6PJG9 635 aa12.59□□□□□ -0.39
TRIM4-203ENST00000355947 DPPA4Q7L190 304 aa12.59□□□□□ -0.39
TRIM4-203ENST00000355947 OR7G2Q8NG99 324 aa12.59□□□□□ -0.39
TRIM4-203ENST00000355947 LHFPL5Q8TAF8 219 aa12.59□□□□□ -0.39
TRIM4-203ENST00000355947 GPN1Q9HCN4 374 aaPredicted RBP12.59□□□□□ -0.39
TRIM4-203ENST00000355947 TCF7L1Q9HCS4 588 aa12.59□□□□□ -0.39
TRIM4-203ENST00000355947 OR5K3A6NET4 321 aa12.58□□□□□ -0.39
TRIM4-203ENST00000355947 SLC22A31A6NKX4 558 aa12.58□□□□□ -0.39
TRIM4-203ENST00000355947 BLOC1S5-TXNDC5H3BN57 136 aa12.58□□□□□ -0.39
TRIM4-203ENST00000355947 TRIM77I1YAP6 450 aa12.58□□□□□ -0.39
TRIM4-203ENST00000355947 CDC123O75794 336 aaPredicted RBP12.58□□□□□ -0.39
TRIM4-203ENST00000355947 ACRP10323 421 aa12.58□□□□□ -0.39
TRIM4-203ENST00000355947 VIPR2P41587 438 aa12.58□□□□□ -0.39
TRIM4-203ENST00000355947 RPS15P62841 145 aaKnown RBP12.58□□□□□ -0.39
TRIM4-203ENST00000355947 OR1Q1Q15612 314 aa12.58□□□□□ -0.39
TRIM4-203ENST00000355947 SCGB2B2Q4G0G5 96 aa12.58□□□□□ -0.39
TRIM4-203ENST00000355947 KIAA1211LQ6NV74 962 aa12.58□□□□□ -0.39
TRIM4-203ENST00000355947 PDZD9Q8IXQ8 264 aa12.58□□□□□ -0.39
TRIM4-203ENST00000355947 ZNF511Q8NB15 262 aa12.58□□□□□ -0.39
TRIM4-203ENST00000355947 ZNF485Q8NCK3 441 aa12.58□□□□□ -0.39
TRIM4-203ENST00000355947 CD99L2Q8TCZ2 262 aa12.58□□□□□ -0.39
TRIM4-203ENST00000355947 VOPP1Q96AW1 172 aa12.58□□□□□ -0.39
TRIM4-203ENST00000355947 ELP4Q96EB1 424 aa12.58□□□□□ -0.39
TRIM4-203ENST00000355947 MFFQ9GZY8 342 aa12.58□□□□□ -0.39
TRIM4-203ENST00000355947 EXO5Q9H790 373 aa12.58□□□□□ -0.39
TRIM4-203ENST00000355947 ACSS1Q9NUB1 689 aaPredicted RBP12.58□□□□□ -0.39
TRIM4-203ENST00000355947 MED11Q9P086 117 aa12.58□□□□□ -0.39
TRIM4-203ENST00000355947 ZMIZ1Q9ULJ6 1067 aa12.58□□□□□ -0.39
TRIM4-203ENST00000355947 C4orf47A7E2U8 309 aa12.58□□□□□ -0.4
TRIM4-203ENST00000355947 H7C1C5 153 aa12.58□□□□□ -0.4
TRIM4-203ENST00000355947 PYCARD-AS1I3L0S3 204 aa12.58□□□□□ -0.4
TRIM4-203ENST00000355947 CCSO14618 274 aa12.58□□□□□ -0.4
TRIM4-203ENST00000355947 CASC3O15234 703 aaKnown RBP12.58□□□□□ -0.4
TRIM4-203ENST00000355947 ACADLP28330 430 aa12.58□□□□□ -0.4
TRIM4-203ENST00000355947 LCN6P62502 163 aa12.58□□□□□ -0.4
TRIM4-203ENST00000355947 DEFB103AP81534 67 aa12.58□□□□□ -0.4
TRIM4-203ENST00000355947 SRSF5Q13243 272 aaKnown RBP12.58□□□□□ -0.4
TRIM4-203ENST00000355947 RAB33AQ14088 237 aa12.58□□□□□ -0.4
TRIM4-203ENST00000355947 METTL11BQ5VVY1 283 aa12.58□□□□□ -0.4
TRIM4-203ENST00000355947 ZNF761Q86XN6 746 aaPredicted RBP12.58□□□□□ -0.4
TRIM4-203ENST00000355947 SETD7Q8WTS6 366 aaKnown RBP12.58□□□□□ -0.4
TRIM4-203ENST00000355947 SRA1Q9HD15 236 aaKnown RBP12.58□□□□□ -0.4
TRIM4-203ENST00000355947 PCDHB16Q9NRJ7 776 aa12.58□□□□□ -0.4
TRIM4-203ENST00000355947 SPHK1Q9NYA1 384 aa12.58□□□□□ -0.4
TRIM4-203ENST00000355947 KLHL9Q9P2J3 617 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms