RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 LINC01553A4QN01 128 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 KRBOX1C9JBD0 128 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 MRPS14O60783 128 aaKnown RBP13.1□□□□□ -0.31
SREBF1-202ENST00000355815 RGS11O94810 467 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 HIST1H1TP22492 207 aaPredicted RBP13.1□□□□□ -0.31
SREBF1-202ENST00000355815 AGTR1P30556 359 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 DEFA6Q01524 100 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 DUSP6Q16828 381 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 FAM111BQ6SJ93 734 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 FCRLAQ7L513 359 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 CD163Q86VB7 1156 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 CCL4L1Q8NHW4 92 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 LRRC46Q96FV0 321 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 ALOXE3Q9BYJ1 711 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 ZNF223Q9UK11 482 aaPredicted RBP13.1□□□□□ -0.31
SREBF1-202ENST00000355815 SLC33A1O00400 549 aaPredicted RBP13.1□□□□□ -0.31
SREBF1-202ENST00000355815 RENP00797 406 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 ZNF250P15622 560 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 KIR2DL3P43628 341 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 P2RY14Q15391 338 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 ZNF585AQ6P3V2 769 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 LCTLQ6UWM7 567 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 OR14K1Q8NGZ2 314 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 C4orf36Q96KX1 117 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 C1orf226A1L170 272 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 ACOD1A6NK06 481 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 ZNF705GA8MUZ8 300 aaPredicted RBP13.1□□□□□ -0.31
SREBF1-202ENST00000355815 SCG5P05408 212 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 CSF3P09919 207 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 SLC6A6P31641 620 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 GDNFP39905 211 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 EIF2S3P41091 472 aaKnown RBP13.1□□□□□ -0.31
SREBF1-202ENST00000355815 PPT1P50897 306 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 GPR176Q14439 515 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 MFSD4AQ8N468 514 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 MS4A15Q8N5U1 240 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 FCRL1Q96LA6 429 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 LRRC3BQ96PB8 259 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 SLC38A3Q99624 504 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 TPSD1Q9BZJ3 242 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 C1GALT1Q9NS00 363 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 NPAP1Q9NZP6 1156 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 MRTO4Q9UKD2 239 aaKnown RBP13.1□□□□□ -0.31
SREBF1-202ENST00000355815 CYP8B1Q9UNU6 501 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 RPS10-NUDT3A0A1W2PQS6 291 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 POM121BA6NF01 834 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 H3BQ06 376 aaPredicted RBP13.1□□□□□ -0.31
SREBF1-202ENST00000355815 SLC43A1O75387 559 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 AIFM1O95831 613 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 CCKBRP32239 447 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 RPS10P46783 165 aaKnown RBP13.1□□□□□ -0.31
SREBF1-202ENST00000355815 RAE1P78406 368 aaKnown RBP13.1□□□□□ -0.31
SREBF1-202ENST00000355815 IDO2Q6ZQW0 420 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 CALHM3Q86XJ0 350 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 NRROSQ86YC3 692 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 SLC16A11Q8NCK7 471 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 OR5K2Q8NHB8 316 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 MS4A8Q9BY19 250 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 SLC7A7Q9UM01 511 aa13.1□□□□□ -0.31
SREBF1-202ENST00000355815 ZNF646O15015 1829 aaPredicted RBP13.1□□□□□ -0.31
SREBF1-202ENST00000355815 CHP2O43745 196 aa13.09□□□□□ -0.31
SREBF1-202ENST00000355815 PPP1R3DO95685 299 aa13.09□□□□□ -0.31
SREBF1-202ENST00000355815 MAOBP27338 520 aa13.09□□□□□ -0.31
SREBF1-202ENST00000355815 C14orf28Q4W4Y0 310 aa13.09□□□□□ -0.31
SREBF1-202ENST00000355815 COMTD1Q86VU5 262 aa13.09□□□□□ -0.31
SREBF1-202ENST00000355815 LRRC28Q86X40 367 aaPredicted RBP13.09□□□□□ -0.31
SREBF1-202ENST00000355815 OR10R2Q8NGX6 335 aa13.09□□□□□ -0.31
SREBF1-202ENST00000355815 STK35Q8TDR2 534 aa13.09□□□□□ -0.31
SREBF1-202ENST00000355815 MRPS33Q9Y291 106 aaKnown RBP13.09□□□□□ -0.31
SREBF1-202ENST00000355815 TRAV20A0A0B4J274 112 aa13.09□□□□□ -0.31
SREBF1-202ENST00000355815 OTOL1A6NHN0 477 aaPredicted RBP13.09□□□□□ -0.31
SREBF1-202ENST00000355815 UNC119BA6NIH7 251 aa13.09□□□□□ -0.31
SREBF1-202ENST00000355815 SLC22A31A6NKX4 558 aa13.09□□□□□ -0.31
SREBF1-202ENST00000355815 ITGA5P08648 1049 aa13.09□□□□□ -0.31
SREBF1-202ENST00000355815 PBX2P40425 430 aa13.09□□□□□ -0.31
SREBF1-202ENST00000355815 LSM11P83369 360 aaKnown RBP eCLIP13.09□□□□□ -0.311e-8■□□□□ 10.3
SREBF1-202ENST00000355815 CDC20Q12834 499 aa13.09□□□□□ -0.31
SREBF1-202ENST00000355815 MFSD13AQ14CX5 517 aa13.09□□□□□ -0.31
SREBF1-202ENST00000355815 SLC16A12Q6ZSM3 486 aa13.09□□□□□ -0.31
SREBF1-202ENST00000355815 SUN3Q8TAQ9 357 aa13.09□□□□□ -0.31
SREBF1-202ENST00000355815 RAB7BQ96AH8 199 aa13.09□□□□□ -0.31
SREBF1-202ENST00000355815 RAB11FIP5Q9BXF6 653 aa13.09□□□□□ -0.31
SREBF1-202ENST00000355815 OR8D2Q9GZM6 311 aa13.09□□□□□ -0.31
SREBF1-202ENST00000355815 SERGEFQ9UGK8 458 aa13.09□□□□□ -0.31
SREBF1-202ENST00000355815 GLS2Q9UI32 602 aa13.09□□□□□ -0.31
SREBF1-202ENST00000355815 SLC9B1P1A6NJY1 282 aa13.09□□□□□ -0.31
SREBF1-202ENST00000355815 FCMRO60667 390 aa13.09□□□□□ -0.31
SREBF1-202ENST00000355815 RAB3DO95716 219 aa13.09□□□□□ -0.31
SREBF1-202ENST00000355815 CSNK1G2P78368 415 aa13.09□□□□□ -0.31
SREBF1-202ENST00000355815 ENPP2Q13822 863 aa13.09□□□□□ -0.31
SREBF1-202ENST00000355815 LILRA6Q6PI73 481 aa13.09□□□□□ -0.31
SREBF1-202ENST00000355815 GPR135Q8IZ08 494 aa13.09□□□□□ -0.31
SREBF1-202ENST00000355815 OR56B4Q8NH76 319 aa13.09□□□□□ -0.31
SREBF1-202ENST00000355815 SMAP2Q8WU79 429 aaPredicted RBP13.09□□□□□ -0.31
SREBF1-202ENST00000355815 C15orf40Q8WUR7 153 aa13.09□□□□□ -0.31
SREBF1-202ENST00000355815 APOOQ9BUR5 198 aa13.09□□□□□ -0.31
SREBF1-202ENST00000355815 GPR34Q9UPC5 381 aa13.09□□□□□ -0.31
SREBF1-202ENST00000355815 SPTBN2O15020 2390 aa13.09□□□□□ -0.31
SREBF1-202ENST00000355815 KCNE1BA0A087WTH5 132 aa13.08□□□□□ -0.31
SREBF1-202ENST00000355815 FOXE1O00358 373 aaPredicted RBP13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms