RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 STX11O75558 287 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 PRKRAO75569 313 aaKnown RBP6.35□□□□□ -1.39
VPS13A-201ENST00000355766 NKX2-2O95096 273 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 TNFAIP8O95379 198 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 STATHP02808 62 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 ALOX5P09917 674 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 THRBP10828 461 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 ITGAMP11215 1152 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 ANXA8P13928 327 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 FBLP22087 321 aaKnown RBP6.35□□□□□ -1.39
VPS13A-201ENST00000355766 RPS4Y1P22090 263 aaKnown RBP6.35□□□□□ -1.39
VPS13A-201ENST00000355766 MYF6P23409 242 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 MST1P26927 711 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 IFNA8P32881 189 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 IST1P53990 364 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 ARG2P78540 354 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 DCDP81605 110 aaKnown RBP6.35□□□□□ -1.39
VPS13A-201ENST00000355766 VLDLRP98155 873 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 LTBQ06643 244 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 MGAT2Q10469 447 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 STX4Q12846 297 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 FOXD4Q12950 439 aaPredicted RBP6.35□□□□□ -1.39
VPS13A-201ENST00000355766 SLC13A2Q13183 592 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 DUSP8Q13202 625 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 DGCR6Q14129 220 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 ELAVL1Q15717 326 aaKnown RBP6.35□□□□□ -1.39
VPS13A-201ENST00000355766 MAPK11Q15759 364 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 C3AR1Q16581 482 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 LRRC36Q1X8D7 754 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 SLC36A3Q495N2 470 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 LIN52Q52LA3 116 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 CD276Q5ZPR3 534 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 KRTAP5-3Q6L8H2 238 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 FAHD1Q6P587 224 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 LINC00696Q6ZRV3 163 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 USP51Q70EK9 711 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 PRSS41Q7RTY9 318 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 C16orf62Q7Z3J2 963 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.35□□□□□ -1.39
VPS13A-201ENST00000355766 AMIGO2Q86SJ2 522 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 OFCC1Q8IZS5 231 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 OR5T3Q8NGG3 340 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 SPPL2AQ8TCT8 520 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 DAZLQ92904 295 aaKnown RBP6.35□□□□□ -1.39
VPS13A-201ENST00000355766 RIT1Q92963 219 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 MMABQ96EY8 250 aaPredicted RBP6.35□□□□□ -1.39
VPS13A-201ENST00000355766 FBXL20Q96IG2 436 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 THOC3Q96J01 351 aaKnown RBP6.35□□□□□ -1.39
VPS13A-201ENST00000355766 VPS50Q96JG6 964 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 VSTM2LQ96N03 204 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 GNRHR2Q96P88 292 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 DGAT2Q96PD7 388 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 SEMA6AQ9H2E6 1030 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 ZNF696Q9H7X3 374 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 MTHFD2LQ9H903 347 aaPredicted RBP6.35□□□□□ -1.39
VPS13A-201ENST00000355766 WDR54Q9H977 334 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 SEC61A2Q9H9S3 476 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 HHATLQ9HCP6 504 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 ADAP2Q9NPF8 381 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 LANCL2Q9NS86 450 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 PNPLA3Q9NST1 481 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 TINAGQ9UJW2 476 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 PPIEQ9UNP9 301 aaKnown RBP6.35□□□□□ -1.39
VPS13A-201ENST00000355766 RPH3AQ9Y2J0 694 aaPredicted RBP6.35□□□□□ -1.39
VPS13A-201ENST00000355766 CLDN16Q9Y5I7 305 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 HS3ST3B1Q9Y662 390 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 TCRBV16S1A1N1A0A5B0 115 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 HTR3EA5X5Y0 456 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 AGAP5A6NIR3 686 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 SAC3D1A6NKF1 404 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 ACOT7O00154 380 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 SOCS2O14508 198 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 SLC16A6O15403 523 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 FZD7O75084 574 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 LGI1O95970 557 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 IL18BPO95998 194 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 CRYABP02511 175 aaKnown RBP6.34□□□□□ -1.39
VPS13A-201ENST00000355766 DBIP07108 87 aaKnown RBP6.34□□□□□ -1.39
VPS13A-201ENST00000355766 FESP07332 822 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 CHRM4P08173 479 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 PABPC4LP0CB38 370 aaKnown RBP6.34□□□□□ -1.39
VPS13A-201ENST00000355766 OR12D1P0DN82 309 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 IGFBP2P18065 325 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 NT5EP21589 574 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 CAPGP40121 348 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 TNFSF10P50591 281 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 CHN2P52757 468 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 GPR85P60893 370 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 OLR1P78380 273 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 DUSP2Q05923 314 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 FUT5Q11128 374 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 MERTKQ12866 999 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 BLMHQ13867 455 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 KEAP1Q14145 624 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 LARS2Q15031 903 aaKnown RBP6.34□□□□□ -1.39
VPS13A-201ENST00000355766 PDK3Q15120 406 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 NRF1Q16656 503 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.34□□□□□ -1.39
VPS13A-201ENST00000355766 KCTD21Q4G0X4 260 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 NKAIN1Q4KMZ8 207 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms