RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 ZNF718Q3SXZ3 478 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 SBK1Q52WX2 424 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 SPANXN2Q5MJ10 180 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 ZNF324BQ6AW86 544 aaPredicted RBP1.35□□□□□ -2.19
BRCA1-202ENST00000354071 FAM71F2Q6NXP2 309 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 TMEM184AQ6ZMB5 413 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 ANKRD37Q7Z713 158 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 SLC47A2Q86VL8 602 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 EGFL6Q8IUX8 553 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 NECAB1Q8N987 351 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 OR52H1Q8NGJ2 320 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 OR52I1Q8NGK6 324 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 OR5B3Q8NH48 314 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 ELMO1Q92556 727 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 SCRN2Q96FV2 425 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 CELF6Q96J87 481 aaKnown RBP1.35□□□□□ -2.19
BRCA1-202ENST00000354071 ANKRD27Q96NW4 1050 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 GSDMAQ96QA5 445 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 SIKE1Q9BRV8 207 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 ROGDIQ9GZN7 287 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 EHD1Q9H4M9 534 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 DEPPQ9NTK1 212 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 PSMC3IPQ9P2W1 217 aaPredicted RBP1.35□□□□□ -2.19
BRCA1-202ENST00000354071 KIF15Q9NS87 1388 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 COL14A1Q05707 1796 aaKnown RBP1.35□□□□□ -2.19
BRCA1-202ENST00000354071 HFM1A2PYH4 1435 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 ASXL1Q8IXJ9 1541 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 IGHV4-4A0A075B6R2 117 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 NPIPA5A0A0B4J1W7 369 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 TRAV25A0A0B4J276 109 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 FRG2CA6NGY1 282 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 NPIPA5E9PKD4 350 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 RS1O15537 224 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 LATO43561 262 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 PAK4O96013 591 aaPredicted RBP1.34□□□□□ -2.19
BRCA1-202ENST00000354071 PGK1P00558 417 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 SERPIND1P05546 499 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 CRYGBP07316 175 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 GSTA1P08263 222 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 GNA11P29992 359 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 SLC1A2P43004 574 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 CEBPDP49716 269 aaPredicted RBP1.34□□□□□ -2.19
BRCA1-202ENST00000354071 DUSP3P51452 185 aaPredicted RBP1.34□□□□□ -2.19
BRCA1-202ENST00000354071 EFNB2P52799 333 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 ERVPABLB-1P60509 514 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 OSTNP61366 133 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 HERV-K104P61576 105 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 SIGLEC14Q08ET2 396 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 GCKRQ14397 625 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 SIX1Q15475 284 aaPredicted RBP1.34□□□□□ -2.19
BRCA1-202ENST00000354071 CCL14Q16627 93 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 XKR7Q5GH72 579 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 MS4A13Q5J8X5 152 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 ADAMTSL4-AS1Q5T5F5 129 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 STPG1Q5TH74 334 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 RAET1LQ5VY80 246 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 TMEM53Q6P2H8 277 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 SASS6Q6UVJ0 657 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 ZNF836Q6ZNA1 936 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 NLRP9Q7RTR0 991 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 MOB3BQ86TA1 216 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 CARM1Q86X55 608 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 SLC35F2Q8IXU6 374 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 DUX5Q96PT3 197 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 IL4I1Q96RQ9 567 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 RNF2Q99496 336 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 FUCA2Q9BTY2 467 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 SLC7A5P2Q9GIP4 190 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 RHBGQ9H310 441 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 RNF167Q9H6Y7 350 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 FKRPQ9H9S5 495 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 NPIPA1Q9UND3 350 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 MAD1L1Q9Y6D9 718 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 ARHGEF10O15013 1369 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 DICER1Q9UPY3 1922 aaKnown RBP1.34□□□□□ -2.19
BRCA1-202ENST00000354071 KIF1AQ12756 1690 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 IGLV3-22A0A075B6J6 115 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 TRGV8A0A0C4DH27 118 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 OR6C65A6NJZ3 312 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 GABRR3A8MPY1 467 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 TCP10L2B9ZVM9 353 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 E9PQ18 207 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 PDLIM1O00151 329 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 LCMT2O60294 686 aaKnown RBP1.34□□□□□ -2.19
BRCA1-202ENST00000354071 AP2A2O94973 939 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 C1orf105O95561 183 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 CSTAP01040 98 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 RALBP11234 206 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 PLP1P60201 277 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 RPS8P62241 208 aaKnown RBP1.34□□□□□ -2.19
BRCA1-202ENST00000354071 RPL23AP62750 156 aaKnown RBP1.34□□□□□ -2.19
BRCA1-202ENST00000354071 GNB1P62873 340 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 BST2Q10589 180 aaKnown RBP1.34□□□□□ -2.19
BRCA1-202ENST00000354071 KLRB1Q12918 225 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 BNIP1Q12981 228 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 HAGHQ16775 308 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 VWA2Q5GFL6 755 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 C1orf220Q5T0J3 134 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 AADACL4Q5VUY2 407 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 RFWD3Q6PCD5 774 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms