RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 ANKRD61A6NGH8 418 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 CASTOR2A6NHX0 329 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 C19orf81C9J6K1 198 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 PLPP2O43688 288 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 GKN3PP0CG01 181 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 COX5BP10606 129 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 ADH6P28332 368 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 UNQ6494/PRO21346Q6UXR6 183 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 LINGO4Q6UY18 593 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 MMP21Q8N119 569 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 NLGN1Q8N2Q7 840 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 GTPBP8Q8N3Z3 284 aaPredicted RBP12.28□□□□□ -0.44
IFT88-202ENST00000351808 C15orf54Q8N8G6 183 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 NLGN2Q8NFZ4 835 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 FAM46AQ96IP4 442 aaKnown RBP12.28□□□□□ -0.44
IFT88-202ENST00000351808 C16orf70Q9BSU1 422 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 CHST6Q9GZX3 395 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 CXorf36Q9H7Y0 433 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 MED20Q9H944 212 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 PATJQ8NI35 1801 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 J3QLW9 94 aa12.27□□□□□ -0.45
IFT88-202ENST00000351808 TNFRSF10BO14763 440 aa12.27□□□□□ -0.45
IFT88-202ENST00000351808 LILRB5O75023 590 aa12.27□□□□□ -0.45
IFT88-202ENST00000351808 FURINP09958 794 aa12.27□□□□□ -0.45
IFT88-202ENST00000351808 ZNF19P17023 458 aa12.27□□□□□ -0.45
IFT88-202ENST00000351808 TYMPP19971 482 aa12.27□□□□□ -0.45
IFT88-202ENST00000351808 CPT2P23786 658 aa12.27□□□□□ -0.45
IFT88-202ENST00000351808 AVPR2P30518 371 aa12.27□□□□□ -0.45
IFT88-202ENST00000351808 CCR7P32248 378 aa12.27□□□□□ -0.45
IFT88-202ENST00000351808 RPS13P62277 151 aaKnown RBP12.27□□□□□ -0.45
IFT88-202ENST00000351808 IRF4Q15306 451 aa12.27□□□□□ -0.45
IFT88-202ENST00000351808 LIPJQ5W064 366 aa12.27□□□□□ -0.45
IFT88-202ENST00000351808 ZNF813Q6ZN06 617 aa12.27□□□□□ -0.45
IFT88-202ENST00000351808 BEST3Q8N1M1 668 aa12.27□□□□□ -0.45
IFT88-202ENST00000351808 KLHDC9Q8NEP7 349 aa12.27□□□□□ -0.45
IFT88-202ENST00000351808 OR1J4Q8NGS1 313 aa12.27□□□□□ -0.45
IFT88-202ENST00000351808 DUSP19Q8WTR2 217 aa12.27□□□□□ -0.45
IFT88-202ENST00000351808 PHYHIPLQ96FC7 376 aa12.27□□□□□ -0.45
IFT88-202ENST00000351808 SPATC1LQ9H0A9 340 aa12.27□□□□□ -0.45
IFT88-202ENST00000351808 IL21RQ9HBE5 538 aa12.27□□□□□ -0.45
IFT88-202ENST00000351808 F5H0A9 414 aaPredicted RBP12.27□□□□□ -0.45
IFT88-202ENST00000351808 J3QRE1 110 aa12.27□□□□□ -0.45
IFT88-202ENST00000351808 F11P03951 625 aa12.27□□□□□ -0.45
IFT88-202ENST00000351808 CD2P06729 351 aa12.27□□□□□ -0.45
IFT88-202ENST00000351808 MMP10P09238 476 aa12.27□□□□□ -0.45
IFT88-202ENST00000351808 AGTR1P30556 359 aa12.27□□□□□ -0.45
IFT88-202ENST00000351808 TRHRP34981 398 aaPredicted RBP12.27□□□□□ -0.45
IFT88-202ENST00000351808 P2RX1P51575 399 aa12.27□□□□□ -0.45
IFT88-202ENST00000351808 CBFBQ13951 182 aa12.27□□□□□ -0.45
IFT88-202ENST00000351808 C4orf46Q504U0 113 aa12.27□□□□□ -0.45
IFT88-202ENST00000351808 FAM199XQ6PEV8 388 aaPredicted RBP12.27□□□□□ -0.45
IFT88-202ENST00000351808 VRK3Q8IV63 474 aa12.27□□□□□ -0.45
IFT88-202ENST00000351808 OR6T1Q8NGN1 323 aa12.27□□□□□ -0.45
IFT88-202ENST00000351808 GHSRQ92847 366 aa12.27□□□□□ -0.45
IFT88-202ENST00000351808 MS4A4AQ96JQ5 239 aa12.27□□□□□ -0.45
IFT88-202ENST00000351808 SPOCK3Q9BQ16 436 aa12.27□□□□□ -0.45
IFT88-202ENST00000351808 SLC12A9Q9BXP2 914 aa12.27□□□□□ -0.45
IFT88-202ENST00000351808 PLXNB2O15031 1838 aa12.26□□□□□ -0.45
IFT88-202ENST00000351808 AP4M1O00189 453 aa12.26□□□□□ -0.45
IFT88-202ENST00000351808 RHOP08100 348 aa12.26□□□□□ -0.45
IFT88-202ENST00000351808 PRG2P13727 222 aa12.26□□□□□ -0.45
IFT88-202ENST00000351808 NME1P15531 152 aaKnown RBP12.26□□□□□ -0.45
IFT88-202ENST00000351808 ACRV1P26436 265 aa12.26□□□□□ -0.45
IFT88-202ENST00000351808 PTH2RP49190 550 aa12.26□□□□□ -0.45
IFT88-202ENST00000351808 RBP2P50120 134 aa12.26□□□□□ -0.45
IFT88-202ENST00000351808 CLDN12P56749 244 aa12.26□□□□□ -0.45
IFT88-202ENST00000351808 CAP1Q01518 475 aa12.26□□□□□ -0.45
IFT88-202ENST00000351808 ZNF763Q0D2J5 394 aa12.26□□□□□ -0.45
IFT88-202ENST00000351808 MPPED2Q15777 294 aa12.26□□□□□ -0.45
IFT88-202ENST00000351808 RPL13AP3Q6NVV1 102 aa12.26□□□□□ -0.45
IFT88-202ENST00000351808 FCRLAQ7L513 359 aa12.26□□□□□ -0.45
IFT88-202ENST00000351808 REC114Q7Z4M0 266 aa12.26□□□□□ -0.45
IFT88-202ENST00000351808 C1orf216Q8TAB5 229 aa12.26□□□□□ -0.45
IFT88-202ENST00000351808 NEU1Q99519 415 aa12.26□□□□□ -0.45
IFT88-202ENST00000351808 TSPAN10Q9H1Z9 355 aaPredicted RBP12.26□□□□□ -0.45
IFT88-202ENST00000351808 IL26Q9NPH9 171 aa12.26□□□□□ -0.45
IFT88-202ENST00000351808 PISDQ9UG56 409 aa12.26□□□□□ -0.45
IFT88-202ENST00000351808 OR5H14A6NHG9 310 aa12.26□□□□□ -0.45
IFT88-202ENST00000351808 A6NLC8 198 aa12.26□□□□□ -0.45
IFT88-202ENST00000351808 TCAPO15273 167 aa12.26□□□□□ -0.45
IFT88-202ENST00000351808 CTNNB1P35222 781 aa12.26□□□□□ -0.45
IFT88-202ENST00000351808 GJA5P36382 358 aa12.26□□□□□ -0.45
IFT88-202ENST00000351808 OR2B8PP59922 312 aa12.26□□□□□ -0.45
IFT88-202ENST00000351808 CXADRP78310 365 aa12.26□□□□□ -0.45
IFT88-202ENST00000351808 FOXK2Q01167 660 aa12.26□□□□□ -0.45
IFT88-202ENST00000351808 GPNMBQ14956 572 aa12.26□□□□□ -0.45
IFT88-202ENST00000351808 FIGNL1Q6PIW4 674 aa12.26□□□□□ -0.45
IFT88-202ENST00000351808 C6orf120Q7Z4R8 191 aa12.26□□□□□ -0.45
IFT88-202ENST00000351808 RNASE11Q8TAA1 199 aaKnown RBP12.26□□□□□ -0.45
IFT88-202ENST00000351808 S100PBPQ96BU1 408 aa12.26□□□□□ -0.45
IFT88-202ENST00000351808 PGLYRP3Q96LB9 341 aa12.26□□□□□ -0.45
IFT88-202ENST00000351808 NRIP2Q9BQI9 281 aa12.26□□□□□ -0.45
IFT88-202ENST00000351808 PIGQQ9BRB3 760 aa12.26□□□□□ -0.45
IFT88-202ENST00000351808 RCC2Q9P258 522 aaKnown RBP12.26□□□□□ -0.45
IFT88-202ENST00000351808 SLC45A1Q9Y2W3 748 aa12.26□□□□□ -0.45
IFT88-202ENST00000351808 ZNF337Q9Y3M9 751 aa12.26□□□□□ -0.45
IFT88-202ENST00000351808 OR12D2P58182 307 aa12.25□□□□□ -0.45
IFT88-202ENST00000351808 TAS2R50P59544 299 aa12.25□□□□□ -0.45
IFT88-202ENST00000351808 TAF13Q15543 124 aa12.25□□□□□ -0.45
IFT88-202ENST00000351808 ELAVL1Q15717 326 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms