RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 E9PI62 339 aa9.6□□□□□ -0.87
SMPD4-201ENST00000351288 ZNF3P17036 446 aa9.6□□□□□ -0.87
SMPD4-201ENST00000351288 OMPP47874 163 aa9.6□□□□□ -0.87
SMPD4-201ENST00000351288 OR10A3P58181 314 aa9.6□□□□□ -0.87
SMPD4-201ENST00000351288 IFITM2Q01629 132 aa9.6□□□□□ -0.87
SMPD4-201ENST00000351288 SQSTM1Q13501 440 aa9.6□□□□□ -0.87
SMPD4-201ENST00000351288 CRMP1Q14194 572 aa9.6□□□□□ -0.87
SMPD4-201ENST00000351288 THSD4Q6ZMP0 1018 aa9.6□□□□□ -0.87
SMPD4-201ENST00000351288 MED25Q71SY5 747 aa9.6□□□□□ -0.87
SMPD4-201ENST00000351288 SLC29A4Q7RTT9 530 aa9.6□□□□□ -0.87
SMPD4-201ENST00000351288 ENKURQ8TC29 256 aa9.6□□□□□ -0.87
SMPD4-201ENST00000351288 THEM6Q8WUY1 208 aa9.6□□□□□ -0.87
SMPD4-201ENST00000351288 SLC25A46Q96AG3 418 aa9.6□□□□□ -0.87
SMPD4-201ENST00000351288 C8orf44Q96CB5 159 aa9.6□□□□□ -0.87
SMPD4-201ENST00000351288 SRRQ9GZT4 340 aa9.6□□□□□ -0.87
SMPD4-201ENST00000351288 HOXD1Q9GZZ0 328 aa9.6□□□□□ -0.87
SMPD4-201ENST00000351288 PPIL3Q9H2H8 161 aaKnown RBP9.6□□□□□ -0.87
SMPD4-201ENST00000351288 FOLH1BQ9HBA9 442 aa9.6□□□□□ -0.87
SMPD4-201ENST00000351288 DIMT1Q9UNQ2 313 aaKnown RBP9.6□□□□□ -0.87
SMPD4-201ENST00000351288 NUP210Q8TEM1 1887 aaPredicted RBP9.59□□□□□ -0.87
SMPD4-201ENST00000351288 MEIOCA2RUB1 952 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 G3V3Y1 287 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 SOX1O00570 391 aaPredicted RBP9.59□□□□□ -0.87
SMPD4-201ENST00000351288 ARHGEF9O43307 516 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 PLOD3O60568 738 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 CHRNB1P11230 501 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 MAKP20794 623 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 CAPZA2P47755 286 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 SNTA1Q13424 505 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 GFOD2Q3B7J2 385 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 AGAP6Q5VW22 663 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 C19orf48Q6RUI8 117 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 LUZP2Q86TE4 346 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 PLXDC1Q8IUK5 500 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 RFLNBQ8N5W9 214 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 MINDY2Q8NBR6 621 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 UXS1Q8NBZ7 420 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 C16orf52Q8NHV5 167 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 AGAP4Q96P64 663 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 NANSQ9NR45 359 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 KLRF1Q9NZS2 232 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 KCNE5Q9UJ90 142 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 FANCMQ8IYD8 2048 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 ZNF749O43361 778 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 IDH3BO43837 385 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 SLC2A2P11168 524 aaPredicted RBP9.59□□□□□ -0.87
SMPD4-201ENST00000351288 MAGEB1P43366 347 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 HTR3AP46098 478 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 EMDP50402 254 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 GAS1P54826 345 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 RAB38P57729 211 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 SNRPD2P62316 118 aaKnown RBP9.59□□□□□ -0.87
SMPD4-201ENST00000351288 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.59□□□□□ -0.87
SMPD4-201ENST00000351288 MEDAGQ5VYS4 303 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 MRM1Q6IN84 353 aaKnown RBP9.59□□□□□ -0.87
SMPD4-201ENST00000351288 LYPD4Q6UWN0 246 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 SYT13Q7L8C5 426 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 NANOGNBQ7Z5D8 188 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 GIMAP5Q96F15 307 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 TXNDC15Q96J42 360 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 TSSK2Q96PF2 358 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 COQ7Q99807 217 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.59□□□□□ -0.87
SMPD4-201ENST00000351288 ZNF221Q9UK13 617 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 DTX4Q9Y2E6 619 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 XKRYO14609 159 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 HEXBP07686 556 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 HTR2AP28223 471 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 VASPP50552 380 aaPredicted RBP9.59□□□□□ -0.87
SMPD4-201ENST00000351288 CDC20Q12834 499 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 COX10Q12887 443 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 SMAD4Q13485 552 aaKnown RBP9.59□□□□□ -0.87
SMPD4-201ENST00000351288 DSG2Q14126 1118 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 OCLNQ16625 522 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 TUBA3EQ6PEY2 450 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 ESPNLQ6ZVH7 1005 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 GPAT4Q86UL3 456 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 RAB43Q86YS6 212 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 PHF21AQ96BD5 680 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 DHRS1Q96LJ7 313 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 HS6ST2Q96MM7 605 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 DOCK7Q96N67 2140 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 BEX1Q9HBH7 125 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 PAQR5Q9NXK6 330 aaPredicted RBP9.59□□□□□ -0.87
SMPD4-201ENST00000351288 TAS2R7Q9NYW3 318 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 ZNF346Q9UL40 294 aaKnown RBP9.59□□□□□ -0.87
SMPD4-201ENST00000351288 CBLCQ9ULV8 474 aa9.59□□□□□ -0.87
SMPD4-201ENST00000351288 C17orf51A8MQB3 221 aa9.58□□□□□ -0.88
SMPD4-201ENST00000351288 METTL12A8MUP2 240 aa9.58□□□□□ -0.88
SMPD4-201ENST00000351288 LAMTOR5O43504 91 aa9.58□□□□□ -0.88
SMPD4-201ENST00000351288 PRAMEF2O60811 474 aa9.58□□□□□ -0.88
SMPD4-201ENST00000351288 RFPL3O75679 317 aa9.58□□□□□ -0.88
SMPD4-201ENST00000351288 WNT1P04628 370 aa9.58□□□□□ -0.88
SMPD4-201ENST00000351288 PIPP12273 146 aaPredicted RBP9.58□□□□□ -0.88
SMPD4-201ENST00000351288 AFF3P51826 1226 aaKnown RBP9.58□□□□□ -0.88
SMPD4-201ENST00000351288 TSPAN31Q12999 210 aa9.58□□□□□ -0.88
SMPD4-201ENST00000351288 PON3Q15166 354 aa9.58□□□□□ -0.88
SMPD4-201ENST00000351288 Q8N402 240 aa9.58□□□□□ -0.88
SMPD4-201ENST00000351288 ACBD7Q8N6N7 88 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms