RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 WDR81Q562E7 1941 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 A0A1W2PQF6 199 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 PRSS44E7EML9 344 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 M0R233 179 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 SEC14L5O43304 696 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 ICMTO60725 284 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 IFNA6P05013 189 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 CD1EP15812 388 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 FASLGP48023 281 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 MLLT10P55197 1068 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 NKAIN1Q4KMZ8 207 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 IFI44Q8TCB0 444 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 ZNF486Q96H40 463 aaPredicted RBP11.28□□□□□ -0.6
SMAD9-201ENST00000350148 BEX2Q9BXY8 128 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 GABARAPL3Q9BY60 117 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 ULBP3Q9BZM4 244 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 LHPPQ9H008 270 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 PRRC2BQ5JSZ5 2229 aaKnown RBP11.28□□□□□ -0.6
SMAD9-201ENST00000350148 ZNF638Q14966 1978 aaKnown RBP11.27□□□□□ -0.6
SMAD9-201ENST00000350148 TEX46H3BTG2 121 aa11.27□□□□□ -0.6
SMAD9-201ENST00000350148 LRRTM2O43300 516 aa11.27□□□□□ -0.6
SMAD9-201ENST00000350148 GASTP01350 101 aa11.27□□□□□ -0.6
SMAD9-201ENST00000350148 NFATC3Q12968 1075 aa11.27□□□□□ -0.6
SMAD9-201ENST00000350148 BATFQ16520 125 aa11.27□□□□□ -0.6
SMAD9-201ENST00000350148 ZNF836Q6ZNA1 936 aa11.27□□□□□ -0.6
SMAD9-201ENST00000350148 DPPA2Q7Z7J5 298 aa11.27□□□□□ -0.6
SMAD9-201ENST00000350148 SENP5Q96HI0 755 aaPredicted RBP11.27□□□□□ -0.6
SMAD9-201ENST00000350148 SPNS1Q9H2V7 528 aa11.27□□□□□ -0.6
SMAD9-201ENST00000350148 KCMF1Q9P0J7 381 aa11.27□□□□□ -0.6
SMAD9-201ENST00000350148 CLDN24A6NM45 220 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 OR2AT4A6NND4 320 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 JUNBP17275 347 aaPredicted RBP11.27□□□□□ -0.61
SMAD9-201ENST00000350148 EIF1P41567 113 aaKnown RBP11.27□□□□□ -0.61
SMAD9-201ENST00000350148 PAPD4Q6PIY7 484 aaKnown RBP11.27□□□□□ -0.61
SMAD9-201ENST00000350148 ANKRD13BQ86YJ7 626 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 B3GNT7Q8NFL0 401 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 NEIL3Q8TAT5 605 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 PPP1R14AQ96A00 147 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 PDCD11Q14690 1871 aaKnown RBP11.27□□□□□ -0.61
SMAD9-201ENST00000350148 ATP6V1G2-DDX39BF2Z307 99 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 L7N2F9 121 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 TNFSF14O43557 240 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 FRS3O43559 492 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 PPP2R2BQ00005 443 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 TLE3Q04726 772 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 C3orf38Q5JPI3 329 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 SLC35F2Q8IXU6 374 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 DND1Q8IYX4 353 aaKnown RBP11.27□□□□□ -0.61
SMAD9-201ENST00000350148 DNAJC22Q8N4W6 341 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 LINC01555Q8NAE3 123 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 SLC16A11Q8NCK7 471 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 OR4K13Q8NH42 304 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 PATE1Q8WXA2 126 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 SLCO4A1Q96BD0 722 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 TM9SF2Q99805 663 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 ERVMER34-1Q9H9K5 563 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 UFSP2Q9NUQ7 469 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 KCND3Q9UK17 655 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 CORINQ9Y5Q5 1042 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 LOC105369274A0A096LPK9 316 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 LOC102723532A0A0G2JNH3 316 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 FGF17O60258 216 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 RPP14O95059 124 aaKnown RBP11.27□□□□□ -0.61
SMAD9-201ENST00000350148 ATP1B1P05026 303 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 CKMT1AP12532 417 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 TAGLNQ01995 201 aaKnown RBP11.27□□□□□ -0.61
SMAD9-201ENST00000350148 MLLT11Q13015 90 aaPredicted RBP11.27□□□□□ -0.61
SMAD9-201ENST00000350148 ERV3-1Q14264 604 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 DUSP5Q16690 384 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 LIPKQ5VXJ0 399 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 TCEAL6Q6IPX3 200 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 Q6ZNX1 250 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 MICAL3Q7RTP6 2002 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 GDF7Q7Z4P5 450 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 OR4N4Q8N0Y3 316 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 GHDCQ8N2G8 530 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 TMEM203Q969S6 136 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 SLC35A4Q96G79 324 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 PLEKHA6Q9Y2H5 1048 aa11.27□□□□□ -0.61
SMAD9-201ENST00000350148 NPIPA5A0A0B4J1W7 369 aa11.26□□□□□ -0.61
SMAD9-201ENST00000350148 LILRB5O75023 590 aa11.26□□□□□ -0.61
SMAD9-201ENST00000350148 OR12D2P58182 307 aa11.26□□□□□ -0.61
SMAD9-201ENST00000350148 SLC26A5P58743 744 aa11.26□□□□□ -0.61
SMAD9-201ENST00000350148 MAP4K2Q12851 820 aa11.26□□□□□ -0.61
SMAD9-201ENST00000350148 RUNX2Q13950 521 aa11.26□□□□□ -0.61
SMAD9-201ENST00000350148 FAM219BQ5XKK7 198 aa11.26□□□□□ -0.61
SMAD9-201ENST00000350148 ZER1Q7Z7L7 766 aa11.26□□□□□ -0.61
SMAD9-201ENST00000350148 IQCF1Q8N6M8 205 aa11.26□□□□□ -0.61
SMAD9-201ENST00000350148 TAS2R3Q9NYW6 316 aa11.26□□□□□ -0.61
SMAD9-201ENST00000350148 PADI1Q9ULC6 663 aa11.26□□□□□ -0.61
SMAD9-201ENST00000350148 MIA3Q5JRA6 1907 aa11.26□□□□□ -0.61
SMAD9-201ENST00000350148 TRAV36DV7A0A075B6V5 113 aa11.26□□□□□ -0.61
SMAD9-201ENST00000350148 OTOL1A6NHN0 477 aaPredicted RBP11.26□□□□□ -0.61
SMAD9-201ENST00000350148 J3KTA2 159 aa11.26□□□□□ -0.61
SMAD9-201ENST00000350148 PRKRAO75569 313 aaKnown RBP11.26□□□□□ -0.61
SMAD9-201ENST00000350148 SNAPC5O75971 98 aa11.26□□□□□ -0.61
SMAD9-201ENST00000350148 MT-ATP6P00846 226 aa11.26□□□□□ -0.61
SMAD9-201ENST00000350148 SLC2A2P11168 524 aaPredicted RBP11.26□□□□□ -0.61
SMAD9-201ENST00000350148 RRADP55042 308 aa11.26□□□□□ -0.61
SMAD9-201ENST00000350148 WNT3P56703 355 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms