RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 RPS17P08708 135 aaKnown RBP5.54□□□□□ -1.52
RFC1-201ENST00000349703 SDC2P34741 201 aa5.54□□□□□ -1.52
RFC1-201ENST00000349703 IDUAP35475 653 aa5.54□□□□□ -1.52
RFC1-201ENST00000349703 GRIA1P42261 906 aa5.54□□□□□ -1.52
RFC1-201ENST00000349703 MC2RQ01718 297 aa5.54□□□□□ -1.52
RFC1-201ENST00000349703 SPIBQ01892 262 aa5.54□□□□□ -1.52
RFC1-201ENST00000349703 ZNF415Q09FC8 603 aa5.54□□□□□ -1.52
RFC1-201ENST00000349703 LYSMD4Q5XG99 296 aa5.54□□□□□ -1.52
RFC1-201ENST00000349703 NCBP2-AS2Q69YL0 99 aa5.54□□□□□ -1.52
RFC1-201ENST00000349703 TRIM40Q6P9F5 258 aa5.54□□□□□ -1.52
RFC1-201ENST00000349703 TRAT1Q6PIZ9 186 aa5.54□□□□□ -1.52
RFC1-201ENST00000349703 MDP1Q86V88 176 aa5.54□□□□□ -1.52
RFC1-201ENST00000349703 LINC00471Q8N535 108 aa5.54□□□□□ -1.52
RFC1-201ENST00000349703 OR2I1PQ8NGU4 316 aa5.54□□□□□ -1.52
RFC1-201ENST00000349703 MRPS31Q92665 395 aaKnown RBP5.54□□□□□ -1.52
RFC1-201ENST00000349703 ERGIC1Q969X5 290 aa5.54□□□□□ -1.52
RFC1-201ENST00000349703 PDCD10Q9BUL8 212 aa5.54□□□□□ -1.52
RFC1-201ENST00000349703 ZNF350Q9GZX5 532 aa5.54□□□□□ -1.52
RFC1-201ENST00000349703 OR51B6Q9H340 312 aa5.54□□□□□ -1.52
RFC1-201ENST00000349703 C8orf33Q9H7E9 229 aaPredicted RBP5.54□□□□□ -1.52
RFC1-201ENST00000349703 ERVW-1Q9UQF0 538 aa5.54□□□□□ -1.52
RFC1-201ENST00000349703 GSTK1Q9Y2Q3 226 aa5.54□□□□□ -1.52
RFC1-201ENST00000349703 OAS3Q9Y6K5 1087 aaKnown RBP5.54□□□□□ -1.52
RFC1-201ENST00000349703 ADAMTSL3P82987 1691 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 SCN7AQ01118 1682 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 CBY3A6NI87 242 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 NME4O00746 187 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 MYL12BO14950 172 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 DHFRP00374 187 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 CAPNS1P04632 268 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 LINC00032P0C843 101 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 ODC1P11926 461 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 SELENBP1Q13228 472 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 TRIM71Q2Q1W2 868 aaKnown RBP5.53□□□□□ -1.52
RFC1-201ENST00000349703 APOBEC3HQ6NTF7 200 aaKnown RBP5.53□□□□□ -1.52
RFC1-201ENST00000349703 IDO2Q6ZQW0 420 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 GPRIN3Q6ZVF9 776 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 RTL10Q7L3V2 364 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 PRRT2Q7Z6L0 340 aaPredicted RBP5.53□□□□□ -1.52
RFC1-201ENST00000349703 CLEC14AQ86T13 490 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 CBARPQ8N350 705 aaPredicted RBP5.53□□□□□ -1.52
RFC1-201ENST00000349703 OR1L4Q8NGR5 311 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 SYNPRQ8TBG9 265 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 MBD3L1Q8WWY6 194 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 LIN37Q96GY3 246 aaPredicted RBP5.53□□□□□ -1.52
RFC1-201ENST00000349703 NEDD4LQ96PU5 975 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 PEBP4Q96S96 227 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 MARCH4Q9P2E8 410 aaPredicted RBP5.53□□□□□ -1.52
RFC1-201ENST00000349703 MBD2Q9UBB5 411 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 BAIAP2Q9UQB8 552 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 CXCR6O00574 342 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 NOBOXO60393 691 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 DHRS3O75911 302 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 AMY1AP04745 511 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 ACSM4P0C7M7 580 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 FMO3P31513 532 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 GMPRP36959 345 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 CXCR3P49682 368 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 ACTA2P62736 377 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 ACTG2P63267 376 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 ACTC1P68032 377 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 ACTA1P68133 377 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 CXADRP78310 365 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 FADDQ13158 208 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 GPR17Q13304 367 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 CLINT1Q14677 625 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 SLC25A52Q3SY17 297 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 ASPHD1Q5U4P2 390 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 HECTD2Q5U5R9 776 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 GPR157Q5UAW9 335 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 CLEC6AQ6EIG7 209 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 SLC25A25Q6KCM7 469 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 H1FNTQ75WM6 255 aaPredicted RBP5.53□□□□□ -1.52
RFC1-201ENST00000349703 TMEM135Q86UB9 458 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 UBAC2Q8NBM4 344 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 OR8J3Q8NGG0 315 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 RND1Q92730 232 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 RAB8BQ92930 207 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 NXF3Q9H4D5 531 aaKnown RBP5.53□□□□□ -1.52
RFC1-201ENST00000349703 SAP30LQ9HAJ7 183 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 TRPV4Q9HBA0 871 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 RHOFQ9HBH0 211 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 TAS2R13Q9NYV9 303 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 EXOSC1Q9Y3B2 195 aaKnown RBP5.53□□□□□ -1.52
RFC1-201ENST00000349703 SAMHD1Q9Y3Z3 626 aaKnown RBP5.53□□□□□ -1.52
RFC1-201ENST00000349703 A0A087WWL8 130 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 FAM92AA1XBS5 289 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 TCAPO15273 167 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 ALOX12BO75342 701 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 POP7O75817 140 aaKnown RBP5.53□□□□□ -1.52
RFC1-201ENST00000349703 MT-ND1P03886 318 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 CXCL8P10145 99 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 SERPINA2P20848 420 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 RGS4P49798 205 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 SIRPAP78324 504 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 HTD2P86397 168 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 LAMTOR4Q0VGL1 99 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 UBE2V2Q15819 145 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 PAGE3Q5JUK9 113 aa5.53□□□□□ -1.52
RFC1-201ENST00000349703 TPGS2Q68CL5 300 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms