RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 PELOQ9BRX2 385 aaKnown RBP12.32□□□□□ -0.44
UBA3-201ENST00000349511 OR2B2Q9GZK3 357 aa12.32□□□□□ -0.44
UBA3-201ENST00000349511 RERGLQ9H628 205 aa12.32□□□□□ -0.44
UBA3-201ENST00000349511 PLEKHB1Q9UF11 243 aaPredicted RBP12.32□□□□□ -0.44
UBA3-201ENST00000349511 CBLCQ9ULV8 474 aa12.32□□□□□ -0.44
UBA3-201ENST00000349511 SATB2Q9UPW6 733 aa12.32□□□□□ -0.44
UBA3-201ENST00000349511 LOXL2Q9Y4K0 774 aa12.32□□□□□ -0.44
UBA3-201ENST00000349511 SPIN1Q9Y657 262 aaPredicted RBP12.32□□□□□ -0.44
UBA3-201ENST00000349511 COL5A1P20908 1838 aaPredicted RBP12.32□□□□□ -0.44
UBA3-201ENST00000349511 LRRTM2O43300 516 aa12.32□□□□□ -0.44
UBA3-201ENST00000349511 TRHRP34981 398 aaPredicted RBP12.32□□□□□ -0.44
UBA3-201ENST00000349511 SNAPC1Q16533 368 aa12.32□□□□□ -0.44
UBA3-201ENST00000349511 KLHL22Q53GT1 634 aa12.32□□□□□ -0.44
UBA3-201ENST00000349511 MRPL2Q5T653 305 aaKnown RBP12.32□□□□□ -0.44
UBA3-201ENST00000349511 OR2G6Q5TZ20 316 aa12.32□□□□□ -0.44
UBA3-201ENST00000349511 MEX3DQ86XN8 651 aaKnown RBP12.32□□□□□ -0.44
UBA3-201ENST00000349511 KIF18BQ86Y91 864 aa12.32□□□□□ -0.44
UBA3-201ENST00000349511 BCORP1Q8N888 145 aa12.32□□□□□ -0.44
UBA3-201ENST00000349511 ZSCAN1Q8NBB4 408 aa12.32□□□□□ -0.44
UBA3-201ENST00000349511 THAP3Q8WTV1 239 aaPredicted RBP12.32□□□□□ -0.44
UBA3-201ENST00000349511 MR1Q95460 341 aa12.32□□□□□ -0.44
UBA3-201ENST00000349511 ST6GAL2Q96JF0 529 aa12.32□□□□□ -0.44
UBA3-201ENST00000349511 TGIF2Q9GZN2 237 aa12.32□□□□□ -0.44
UBA3-201ENST00000349511 NXF5Q9H1B4 397 aaKnown RBP12.32□□□□□ -0.44
UBA3-201ENST00000349511 MMP28Q9H239 520 aa12.32□□□□□ -0.44
UBA3-201ENST00000349511 DDX28Q9NUL7 540 aaKnown RBP12.32□□□□□ -0.44
UBA3-201ENST00000349511 YARS2Q9Y2Z4 477 aaKnown RBP12.32□□□□□ -0.44
UBA3-201ENST00000349511 ZNF292O60281 2723 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 IGLV3-12A0A075B6K2 115 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 A0A1W2PQL4 384 aaPredicted RBP12.31□□□□□ -0.44
UBA3-201ENST00000349511 A8MV72 311 aaPredicted RBP12.31□□□□□ -0.44
UBA3-201ENST00000349511 APOL3O95236 402 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 IGKV3-11P04433 115 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 TSPAN19P0C672 248 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 PRG2P13727 222 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 PRKAR1BP31321 381 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 DDOSTP39656 456 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 EMP2P54851 167 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 WNT4P56705 351 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 RGS8P57771 180 aaPredicted RBP12.31□□□□□ -0.44
UBA3-201ENST00000349511 RPS25P62851 125 aaKnown RBP12.31□□□□□ -0.44
UBA3-201ENST00000349511 SCN1BQ07699 218 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 BIKQ13323 160 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 C16orf47Q6ZP98 133 aaPredicted RBP12.31□□□□□ -0.44
UBA3-201ENST00000349511 MED25Q71SY5 747 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 C9orf40Q8IXQ3 194 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 LINC00471Q8N535 108 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 CLDN22Q8N7P3 220 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 PLPP5Q8NEB5 264 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 HOXB13Q92826 284 aaPredicted RBP12.31□□□□□ -0.44
UBA3-201ENST00000349511 DAZLQ92904 295 aaKnown RBP12.31□□□□□ -0.44
UBA3-201ENST00000349511 PRRC1Q96M27 445 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 ZNF578Q96N58 590 aaPredicted RBP12.31□□□□□ -0.44
UBA3-201ENST00000349511 SPSB2Q99619 263 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 LRFN3Q9BTN0 628 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 PLA2G12AQ9BZM1 189 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 EGLN3Q9H6Z9 239 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 CACYBPQ9HB71 228 aaKnown RBP12.31□□□□□ -0.44
UBA3-201ENST00000349511 FLRT3Q9NZU0 649 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 PRODH2Q9UF12 536 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 PISDQ9UG56 409 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 CNOT1A5YKK6 2376 aaKnown RBP12.31□□□□□ -0.44
UBA3-201ENST00000349511 C2orf92A0A1B0GVN3 265 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 MEIOCA2RUB1 952 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 FABP12A6NFH5 140 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 ALOX12BO75342 701 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 RFPL3O75679 317 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 IFI6P09912 130 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 CSF3P09919 207 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 MYL12AP19105 171 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 GALNSP34059 522 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 SMSP52788 366 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 EEF1A1P68104 462 aaKnown RBP12.31□□□□□ -0.44
UBA3-201ENST00000349511 C3orf38Q5JPI3 329 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 ENTPD8Q5MY95 495 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 XKRXQ6PP77 449 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 RAB11FIP2Q7L804 512 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 ANKRD37Q7Z713 158 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 OR4C3Q8NH37 302 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 GATAD2BQ8WXI9 593 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 TM9SF4Q92544 642 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 RNFT2Q96EX2 444 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 DIRAS2Q96HU8 199 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 CRB3Q9BUF7 120 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 SAP130Q9H0E3 1048 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 FGF20Q9NP95 211 aaPredicted RBP12.31□□□□□ -0.44
UBA3-201ENST00000349511 TOR4AQ9NXH8 423 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 KLHL28Q9NXS3 571 aa12.31□□□□□ -0.44
UBA3-201ENST00000349511 SF3B6Q9Y3B4 125 aaKnown RBP12.31□□□□□ -0.44
UBA3-201ENST00000349511 AHCTF1Q8WYP5 2266 aa12.3□□□□□ -0.44
UBA3-201ENST00000349511 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.3□□□□□ -0.44
UBA3-201ENST00000349511 SMIM30A4D0T7 59 aa12.3□□□□□ -0.44
UBA3-201ENST00000349511 TFECO14948 347 aaPredicted RBP12.3□□□□□ -0.44
UBA3-201ENST00000349511 KLK3P07288 261 aaPredicted RBP12.3□□□□□ -0.44
UBA3-201ENST00000349511 CCNYL3P0C7X3 344 aa12.3□□□□□ -0.44
UBA3-201ENST00000349511 CCKBRP32239 447 aa12.3□□□□□ -0.44
UBA3-201ENST00000349511 SDC2P34741 201 aa12.3□□□□□ -0.44
UBA3-201ENST00000349511 SLC9A3P48764 834 aa12.3□□□□□ -0.44
UBA3-201ENST00000349511 NR0B1P51843 470 aaKnown RBP12.3□□□□□ -0.44
UBA3-201ENST00000349511 TAS2R41P59536 307 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms