RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 SKP2Q13309 424 aa18.66■□□□□ 0.58
CHRNA3-202ENST00000348639 ARHGAP40Q5TG30 622 aa18.66■□□□□ 0.58
CHRNA3-202ENST00000348639 WBP2NLQ6ICG8 309 aa18.66■□□□□ 0.58
CHRNA3-202ENST00000348639 TMEM99Q8N816 258 aa18.66■□□□□ 0.58
CHRNA3-202ENST00000348639 GATSQ8NAP1 163 aa18.66■□□□□ 0.58
CHRNA3-202ENST00000348639 SNRNP27Q8WVK2 155 aaKnown RBP18.66■□□□□ 0.58
CHRNA3-202ENST00000348639 SLC30A2Q9BRI3 323 aa18.66■□□□□ 0.58
CHRNA3-202ENST00000348639 OR51V1Q9H2C8 321 aa18.66■□□□□ 0.58
CHRNA3-202ENST00000348639 TPK1Q9H3S4 243 aa18.66■□□□□ 0.58
CHRNA3-202ENST00000348639 CHRNA9Q9UGM1 479 aa18.66■□□□□ 0.58
CHRNA3-202ENST00000348639 ATXN7L1Q9ULK2 861 aaPredicted RBP18.66■□□□□ 0.58
CHRNA3-202ENST00000348639 CPED1A4D0V7 1026 aa18.66■□□□□ 0.58
CHRNA3-202ENST00000348639 LOC110117498-PIK3R3F6TDL0 507 aa18.66■□□□□ 0.58
CHRNA3-202ENST00000348639 CELP19835 753 aa18.66■□□□□ 0.58
CHRNA3-202ENST00000348639 TNFSF8P32971 234 aa18.66■□□□□ 0.58
CHRNA3-202ENST00000348639 RPS7P62081 194 aaKnown RBP18.66■□□□□ 0.58
CHRNA3-202ENST00000348639 MXD1Q05195 221 aa18.66■□□□□ 0.58
CHRNA3-202ENST00000348639 NSDHLQ15738 373 aa18.66■□□□□ 0.58
CHRNA3-202ENST00000348639 OR5M3Q8NGP4 307 aa18.66■□□□□ 0.58
CHRNA3-202ENST00000348639 PHOSPHO1Q8TCT1 267 aa18.66■□□□□ 0.58
CHRNA3-202ENST00000348639 DAZLQ92904 295 aaKnown RBP18.66■□□□□ 0.58
CHRNA3-202ENST00000348639 ART5Q96L15 291 aa18.66■□□□□ 0.58
CHRNA3-202ENST00000348639 LRFN5Q96NI6 719 aa18.66■□□□□ 0.58
CHRNA3-202ENST00000348639 ALG8Q9BVK2 526 aa18.66■□□□□ 0.58
CHRNA3-202ENST00000348639 NUDT9Q9BW91 350 aa18.66■□□□□ 0.58
CHRNA3-202ENST00000348639 HAO2Q9NYQ3 351 aa18.66■□□□□ 0.58
CHRNA3-202ENST00000348639 PCDHGB6Q9Y5F9 930 aa18.66■□□□□ 0.58
CHRNA3-202ENST00000348639 CACNA1EQ15878 2313 aa18.66■□□□□ 0.58
CHRNA3-202ENST00000348639 HTR3EA5X5Y0 456 aa18.65■□□□□ 0.58
CHRNA3-202ENST00000348639 SNX4O95219 450 aa18.65■□□□□ 0.58
CHRNA3-202ENST00000348639 HLA-DPB1P04440 258 aa18.65■□□□□ 0.58
CHRNA3-202ENST00000348639 GALEQ14376 348 aa18.65■□□□□ 0.58
CHRNA3-202ENST00000348639 STEAP3Q658P3 488 aa18.65■□□□□ 0.58
CHRNA3-202ENST00000348639 APOOLQ6UXV4 268 aa18.65■□□□□ 0.58
CHRNA3-202ENST00000348639 MAMSTRQ6ZN01 415 aa18.65■□□□□ 0.58
CHRNA3-202ENST00000348639 KLBQ86Z14 1044 aa18.65■□□□□ 0.58
CHRNA3-202ENST00000348639 ARIH2OSQ8N7S6 290 aa18.65■□□□□ 0.58
CHRNA3-202ENST00000348639 CYB561A3Q8NBI2 242 aa18.65■□□□□ 0.58
CHRNA3-202ENST00000348639 ATP6V1C2Q8NEY4 427 aa18.65■□□□□ 0.58
CHRNA3-202ENST00000348639 OR14A16Q8NHC5 309 aa18.65■□□□□ 0.58
CHRNA3-202ENST00000348639 ERMAPQ96PL5 475 aaPredicted RBP18.65■□□□□ 0.58
CHRNA3-202ENST00000348639 TIMP4Q99727 224 aa18.65■□□□□ 0.58
CHRNA3-202ENST00000348639 ISG20L2Q9H9L3 353 aaKnown RBP18.65■□□□□ 0.58
CHRNA3-202ENST00000348639 ASB6Q9NWX5 421 aa18.65■□□□□ 0.58
CHRNA3-202ENST00000348639 C2orf92A0A1B0GVN3 265 aa18.64■□□□□ 0.58
CHRNA3-202ENST00000348639 DAPL1A0PJW8 107 aa18.64■□□□□ 0.58
CHRNA3-202ENST00000348639 TOX3O15405 576 aaPredicted RBP18.64■□□□□ 0.58
CHRNA3-202ENST00000348639 REM1O75628 298 aa18.64■□□□□ 0.58
CHRNA3-202ENST00000348639 GAAP10253 952 aa18.64■□□□□ 0.58
CHRNA3-202ENST00000348639 PNMTP11086 282 aa18.64■□□□□ 0.58
CHRNA3-202ENST00000348639 EPHA8P29322 1005 aaPredicted RBP18.64■□□□□ 0.58
CHRNA3-202ENST00000348639 LCN1P31025 176 aa18.64■□□□□ 0.58
CHRNA3-202ENST00000348639 HOXA6P31267 233 aa18.64■□□□□ 0.58
CHRNA3-202ENST00000348639 SDC2P34741 201 aa18.64■□□□□ 0.58
CHRNA3-202ENST00000348639 SLC16A1P53985 500 aa18.64■□□□□ 0.58
CHRNA3-202ENST00000348639 GPR50Q13585 617 aa18.64■□□□□ 0.58
CHRNA3-202ENST00000348639 DNASE1L3Q13609 305 aa18.64■□□□□ 0.58
CHRNA3-202ENST00000348639 TBC1D25Q3MII6 688 aa18.64■□□□□ 0.58
CHRNA3-202ENST00000348639 PMS2CLQ68D20 193 aa18.64■□□□□ 0.58
CHRNA3-202ENST00000348639 SLC22A16Q86VW1 577 aa18.64■□□□□ 0.58
CHRNA3-202ENST00000348639 LRRC17Q8N6Y2 441 aa18.64■□□□□ 0.58
CHRNA3-202ENST00000348639 WDFY2Q96P53 400 aa18.64■□□□□ 0.58
CHRNA3-202ENST00000348639 BABAM2Q9NXR7 383 aa18.64■□□□□ 0.58
CHRNA3-202ENST00000348639 ZNF337Q9Y3M9 751 aa18.64■□□□□ 0.58
CHRNA3-202ENST00000348639 HEATR5AQ86XA9 2040 aa18.64■□□□□ 0.57
CHRNA3-202ENST00000348639 NUP210LQ5VU65 1888 aa18.64■□□□□ 0.57
CHRNA3-202ENST00000348639 CCDC163A0A0D9SF12 145 aa18.64■□□□□ 0.57
CHRNA3-202ENST00000348639 GTPBP1O00178 669 aaKnown RBP18.64■□□□□ 0.57
CHRNA3-202ENST00000348639 RGS5O15539 181 aa18.64■□□□□ 0.57
CHRNA3-202ENST00000348639 ZNF264O43296 627 aa18.64■□□□□ 0.57
CHRNA3-202ENST00000348639 OIP5O43482 229 aa18.64■□□□□ 0.57
CHRNA3-202ENST00000348639 OR7A10O76100 309 aa18.64■□□□□ 0.57
CHRNA3-202ENST00000348639 IGF2P01344 180 aa18.64■□□□□ 0.57
CHRNA3-202ENST00000348639 SBK2P0C263 348 aa18.64■□□□□ 0.57
CHRNA3-202ENST00000348639 CLUP10909 449 aa18.64■□□□□ 0.57
CHRNA3-202ENST00000348639 PNLIPP16233 465 aa18.64■□□□□ 0.57
CHRNA3-202ENST00000348639 CSTF1Q05048 431 aaKnown RBP18.64■□□□□ 0.57
CHRNA3-202ENST00000348639 HNRNPA0Q13151 305 aaKnown RBP18.64■□□□□ 0.57
CHRNA3-202ENST00000348639 EBPQ15125 230 aaKnown RBP18.64■□□□□ 0.57
CHRNA3-202ENST00000348639 GUSBP11Q6P575 273 aa18.64■□□□□ 0.57
CHRNA3-202ENST00000348639 TMEM71Q6P5X7 295 aa18.64■□□□□ 0.57
CHRNA3-202ENST00000348639 TMPRSS9Q7Z410 1059 aa18.64■□□□□ 0.57
CHRNA3-202ENST00000348639 FAM83FQ8NEG4 500 aaPredicted RBP18.64■□□□□ 0.57
CHRNA3-202ENST00000348639 OR10H4Q8NGA5 316 aa18.64■□□□□ 0.57
CHRNA3-202ENST00000348639 MAFAQ8NHW3 353 aaPredicted RBP18.64■□□□□ 0.57
CHRNA3-202ENST00000348639 GAL3ST4Q96RP7 486 aa18.64■□□□□ 0.57
CHRNA3-202ENST00000348639 DUSP23Q9BVJ7 150 aa18.64■□□□□ 0.57
CHRNA3-202ENST00000348639 VN1R1Q9GZP7 353 aa18.64■□□□□ 0.57
CHRNA3-202ENST00000348639 ADGRL4Q9HBW9 690 aa18.64■□□□□ 0.57
CHRNA3-202ENST00000348639 KLHL21Q9UJP4 597 aa18.64■□□□□ 0.57
CHRNA3-202ENST00000348639 PI4KAP42356 2102 aa18.64■□□□□ 0.57
CHRNA3-202ENST00000348639 IGKV1D-42A0A075B6H8 117 aa18.63■□□□□ 0.57
CHRNA3-202ENST00000348639 ELOA3DA6NLF2 546 aaPredicted RBP18.63■□□□□ 0.57
CHRNA3-202ENST00000348639 MCIDASD6RGH6 385 aa18.63■□□□□ 0.57
CHRNA3-202ENST00000348639 CLEC2LP0C7M8 214 aa18.63■□□□□ 0.57
CHRNA3-202ENST00000348639 GALP22466 123 aa18.63■□□□□ 0.57
CHRNA3-202ENST00000348639 RANBP1P43487 201 aa18.63■□□□□ 0.57
CHRNA3-202ENST00000348639 TGM4P49221 684 aa18.63■□□□□ 0.57
CHRNA3-202ENST00000348639 PSPHP78330 225 aa18.63■□□□□ 0.57
CHRNA3-202ENST00000348639 DBPQ10586 325 aaPredicted RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms