RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 TNFSF8P32971 234 aa18.19■□□□□ 0.5
HDAC4-201ENST00000345617 GPR26Q8NDV2 337 aa18.19■□□□□ 0.5
HDAC4-201ENST00000345617 NUDT9Q9BW91 350 aa18.19■□□□□ 0.5
HDAC4-201ENST00000345617 RYDENQ9NUL5 291 aaKnown RBP18.19■□□□□ 0.5
HDAC4-201ENST00000345617 POLHQ9Y253 713 aa18.19■□□□□ 0.5
HDAC4-201ENST00000345617 KPTNQ9Y664 436 aa18.19■□□□□ 0.5
HDAC4-201ENST00000345617 DUSP3P51452 185 aaPredicted RBP18.19■□□□□ 0.5
HDAC4-201ENST00000345617 OR4D1Q15615 310 aa18.19■□□□□ 0.5
HDAC4-201ENST00000345617 TIGD3Q6B0B8 471 aa18.19■□□□□ 0.5
HDAC4-201ENST00000345617 KDF1Q8NAX2 398 aaPredicted RBP18.19■□□□□ 0.5
HDAC4-201ENST00000345617 SCO2O43819 266 aa18.19■□□□□ 0.5
HDAC4-201ENST00000345617 DTYMKP23919 212 aa18.19■□□□□ 0.5
HDAC4-201ENST00000345617 OPCMLQ14982 345 aa18.19■□□□□ 0.5
HDAC4-201ENST00000345617 OR4N5Q8IXE1 308 aa18.19■□□□□ 0.5
HDAC4-201ENST00000345617 SLC14A1Q13336 389 aa18.19■□□□□ 0.5
HDAC4-201ENST00000345617 SERINC2Q96SA4 455 aa18.19■□□□□ 0.5
HDAC4-201ENST00000345617 TMPRSS5Q9H3S3 457 aa18.19■□□□□ 0.5
HDAC4-201ENST00000345617 MOB1AQ9H8S9 216 aa18.19■□□□□ 0.5
HDAC4-201ENST00000345617 CDH20Q9HBT6 801 aa18.19■□□□□ 0.5
HDAC4-201ENST00000345617 VAPAQ9P0L0 249 aa18.19■□□□□ 0.5
HDAC4-201ENST00000345617 LTB4RQ15722 352 aa18.18■□□□□ 0.5
HDAC4-201ENST00000345617 BABAM2Q9NXR7 383 aa18.18■□□□□ 0.5
HDAC4-201ENST00000345617 RNF151Q2KHN1 245 aa18.18■□□□□ 0.5
HDAC4-201ENST00000345617 WBP2NLQ6ICG8 309 aa18.18■□□□□ 0.5
HDAC4-201ENST00000345617 SLC25A32Q9H2D1 315 aa18.18■□□□□ 0.5
HDAC4-201ENST00000345617 POU2F3Q9UKI9 436 aa18.18■□□□□ 0.5
HDAC4-201ENST00000345617 MYO16Q9Y6X6 1858 aa18.18■□□□□ 0.5
HDAC4-201ENST00000345617 TOGARAM1Q9Y4F4 1720 aa18.18■□□□□ 0.5
HDAC4-201ENST00000345617 A0A0D9SEW6 157 aa18.18■□□□□ 0.5
HDAC4-201ENST00000345617 BMP4P12644 408 aa18.18■□□□□ 0.5
HDAC4-201ENST00000345617 HLA-DMAP28067 261 aa18.18■□□□□ 0.5
HDAC4-201ENST00000345617 OPRD1P41143 372 aa18.18■□□□□ 0.5
HDAC4-201ENST00000345617 PHYHD1Q5SRE7 291 aa18.18■□□□□ 0.5
HDAC4-201ENST00000345617 GPR155Q7Z3F1 870 aa18.18■□□□□ 0.5
HDAC4-201ENST00000345617 OR52H1Q8NGJ2 320 aa18.18■□□□□ 0.5
HDAC4-201ENST00000345617 OR1S2Q8NGQ3 325 aa18.18■□□□□ 0.5
HDAC4-201ENST00000345617 WASH4PA8MWX3 477 aa18.18■□□□□ 0.5
HDAC4-201ENST00000345617 ARNTLO00327 626 aa18.18■□□□□ 0.5
HDAC4-201ENST00000345617 JTBO76095 146 aa18.18■□□□□ 0.5
HDAC4-201ENST00000345617 CBLP22681 906 aa18.18■□□□□ 0.5
HDAC4-201ENST00000345617 ETV3P41162 512 aa18.18■□□□□ 0.5
HDAC4-201ENST00000345617 ZNF586Q9NXT0 402 aa18.18■□□□□ 0.5
HDAC4-201ENST00000345617 KCNK5O95279 499 aa18.18■□□□□ 0.5
HDAC4-201ENST00000345617 PDGFAP04085 211 aa18.18■□□□□ 0.5
HDAC4-201ENST00000345617 HNF4GQ14541 408 aa18.18■□□□□ 0.5
HDAC4-201ENST00000345617 NSDHLQ15738 373 aa18.18■□□□□ 0.5
HDAC4-201ENST00000345617 NRARPQ7Z6K4 114 aa18.18■□□□□ 0.5
HDAC4-201ENST00000345617 WDR5BQ86VZ2 330 aa18.18■□□□□ 0.5
HDAC4-201ENST00000345617 ANKRD30BLA7E2S9 258 aa18.18■□□□□ 0.5
HDAC4-201ENST00000345617 OR2C1O95371 312 aa18.18■□□□□ 0.5
HDAC4-201ENST00000345617 RNF144AP50876 292 aaPredicted RBP18.18■□□□□ 0.5
HDAC4-201ENST00000345617 GIMAP2Q9UG22 337 aa18.18■□□□□ 0.5
HDAC4-201ENST00000345617 PGAP2Q9UHJ9 254 aa18.18■□□□□ 0.5
HDAC4-201ENST00000345617 SMCHD1A6NHR9 2005 aa18.18■□□□□ 0.5
HDAC4-201ENST00000345617 ERVFC1P60507 584 aa18.18■□□□□ 0.5
HDAC4-201ENST00000345617 TMEM239Q8WW34 195 aa18.18■□□□□ 0.5
HDAC4-201ENST00000345617 PURGQ9UJV8 347 aaKnown RBP18.18■□□□□ 0.5
HDAC4-201ENST00000345617 YTHDF2Q9Y5A9 579 aaKnown RBP18.18■□□□□ 0.5
HDAC4-201ENST00000345617 ITGB4P16144 1822 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 LAMP1P11279 417 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 CATR1Q13166 79 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 OR13F1Q8NGS4 319 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 MYOTQ9UBF9 498 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 TIPARPQ7Z3E1 657 aaKnown RBP18.17■□□□□ 0.5
HDAC4-201ENST00000345617 PLXDC1Q8IUK5 500 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 ANKRD53Q8N9V6 530 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 C12orf42Q96LP6 360 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 C1GALT1Q9NS00 363 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 GLSO94925 669 aaPredicted RBP18.17■□□□□ 0.5
HDAC4-201ENST00000345617 P04436 131 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 PTNP21246 168 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 TAF9Q16594 264 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 LYPD4Q6UWN0 246 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 KLHDC8AQ8IYD2 350 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 SENP5Q96HI0 755 aaPredicted RBP18.17■□□□□ 0.5
HDAC4-201ENST00000345617 CNIH4Q9P003 139 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 PCDHGA6Q9Y5G7 932 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.17■□□□□ 0.5
HDAC4-201ENST00000345617 GABARAPH6UMI1 98 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 RGS11O94810 467 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 GABARAPO95166 117 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 FOLR1P15328 257 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 NADSYN1Q6IA69 706 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 OTOP2Q7RTS6 562 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 SSX7Q7RTT5 188 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 LINC01599Q8WXQ3 324 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 INSL6Q9Y581 213 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 ZNF587BE7ETH6 402 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 SCAMP1O15126 338 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 HOXB2P14652 356 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 MSX1P28360 303 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 BCL7AQ4VC05 210 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 PAGE3Q5JUK9 113 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 HEPHL1Q6MZM0 1159 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 HCAR1Q9BXC0 346 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 SLC12A9Q9BXP2 914 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 PTGDR2Q9Y5Y4 395 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 CEBPZOSA8MTT3 80 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 CDC123O75794 336 aaPredicted RBP18.17■□□□□ 0.5
HDAC4-201ENST00000345617 GJA5P36382 358 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms