RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 SHEQ5VZ18 495 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 SNX11Q9Y5W9 270 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 CD300LGQ6UXG3 332 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 TMEM18Q96B42 140 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 RBMXL1Q96E39 390 aaKnown RBP12.79□□□□□ -0.36
TRIO-202ENST00000344204 TMEM19Q96HH6 336 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 RAB11FIP5Q9BXF6 653 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 CSNK1G3Q9Y6M4 447 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 GREB1Q4ZG55 1949 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 TRBV4-1A0A0J9YWV2 114 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 SFTA3P0C7M3 94 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 OR13C7P0DN81 318 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 RFC3P40938 356 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 C2orf76Q3KRA6 126 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 ABHD13Q7L211 337 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 FCRLAQ7L513 359 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 ZNF514Q96K75 400 aaPredicted RBP12.79□□□□□ -0.36
TRIO-202ENST00000344204 ABLIM2Q6H8Q1 611 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 DBX2Q6ZNG2 339 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 PPP1R3BQ86XI6 285 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 FAM86B1Q8N7N1 296 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 ARRDC4Q8NCT1 418 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 BCL9O00512 1426 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 SGK494L7N484 410 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 BCL2L11O43521 198 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 LINC00518Q8N0U6 118 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 OR13C2Q8NGS9 318 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 ECHDC3Q96DC8 303 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 UBQLN3Q9H347 655 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 IFNGR1P15260 489 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 STK19P49842 368 aaPredicted RBP12.79□□□□□ -0.36
TRIO-202ENST00000344204 SULF2Q8IWU5 870 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 C16orf78Q8WTQ4 265 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 CMKLR1Q99788 373 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 SOHLH2Q9NX45 425 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 C5AR1P21730 350 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 LSMEM2Q8N112 164 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 BPIFB2Q8N4F0 458 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 CELF5Q8N6W0 485 aaKnown RBP12.79□□□□□ -0.36
TRIO-202ENST00000344204 OR1J1Q8NGS3 322 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 PIGQQ9BRB3 760 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 KCNS2Q9ULS6 477 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 TMEM129A0AVI4 362 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 DCTN6O00399 190 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 RIDAP52758 137 aaKnown RBP12.78□□□□□ -0.36
TRIO-202ENST00000344204 HOXB13Q92826 284 aaPredicted RBP12.78□□□□□ -0.36
TRIO-202ENST00000344204 PGAP3Q96FM1 320 aaPredicted RBP12.78□□□□□ -0.36
TRIO-202ENST00000344204 GAL3ST4Q96RP7 486 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 NPAS1Q99742 590 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 DVL2O14641 736 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 GPX5O75715 221 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 FABP4P15090 132 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 SLC9A3R2Q15599 337 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 TECPR1Q7Z6L1 1165 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 TAF9BQ9HBM6 251 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 UPK3BL1B0FP48 263 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 UPK3BL2E5RIL1 263 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 PRAMEF11O60813 436 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 NFYBP25208 207 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 RGMBQ6NW40 437 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 AMZ2Q86W34 360 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 PARGQ86W56 976 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 SCAMP5Q8TAC9 235 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 ACPTQ9BZG2 426 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 TMEM231Q9H6L2 316 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 KCNK12Q9HB15 430 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 FAM96BQ9Y3D0 163 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 GLOD5A6NK44 160 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 SNRPGP15A8MWD9 76 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 ZNF25P17030 456 aaPredicted RBP12.78□□□□□ -0.36
TRIO-202ENST00000344204 NFATC2Q13469 925 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 SLC16A12Q6ZSM3 486 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 OR10D4PQ8NGN7 298 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 NTMT1Q9BV86 223 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 NMNAT2Q9BZQ4 307 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 HYAL2Q12891 473 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 POM121Q96HA1 1249 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 C1orf74Q96LT6 269 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 PHPT1Q9NRX4 125 aaPredicted RBP12.78□□□□□ -0.36
TRIO-202ENST00000344204 LRP5LA4QPB2 252 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 CD80P33681 288 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 RAD52P43351 418 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 CX3CR1P49238 355 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 PTP4A1Q93096 173 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 FZD3Q9NPG1 666 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 MMP26Q9NRE1 261 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 HMGN2P46Q86SG4 172 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 HUS1BQ8NHY5 278 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 LCN9Q8WX39 176 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 EXTL1Q92935 676 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 PRAP1Q96NZ9 151 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 ASB6Q9NWX5 421 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 ZNF586Q9NXT0 402 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 PIPP12273 146 aaPredicted RBP12.78□□□□□ -0.36
TRIO-202ENST00000344204 HSD11B2P80365 405 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 MFGE8Q08431 387 aaPredicted RBP12.78□□□□□ -0.36
TRIO-202ENST00000344204 ZNF239Q16600 458 aaKnown RBP12.78□□□□□ -0.36
TRIO-202ENST00000344204 RELL2Q8NC24 303 aaPredicted RBP12.78□□□□□ -0.36
TRIO-202ENST00000344204 SLC2A13Q96QE2 648 aa12.78□□□□□ -0.36
TRIO-202ENST00000344204 MC3RP41968 323 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms