RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 OR10A5Q9H207 317 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 SGK2Q9HBY8 427 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 GJD2Q9UKL4 321 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 VWDEQ8N2E2 1590 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 AKR7A3O95154 331 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 SEC61A1P61619 476 aaKnown RBP3.54□□□□□ -1.84
SYNE2-202ENST00000344113 CDK5R2Q13319 367 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 ELFN2Q5R3F8 820 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 VASNQ6EMK4 673 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 LIPIQ6XZB0 460 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 NUDT10Q8NFP7 164 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 F2RL3Q96RI0 385 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 SNAI1O95863 264 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-202ENST00000344113 PTH2RP49190 550 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 TMPRSS3P57727 454 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 VWA1Q6PCB0 445 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 ADGRG2Q8IZP9 1017 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 DCAF4Q8WV16 495 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 RANGRFQ9HD47 186 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-202ENST00000344113 ZCCHC3Q9NUD5 404 aaKnown RBP3.54□□□□□ -1.84
SYNE2-202ENST00000344113 ETV7Q9Y603 341 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 OR5H14A6NHG9 310 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 SLC1A7O00341 560 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 FABP7O15540 132 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 SLC10A3P09131 477 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 PSPHP78330 225 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 ECH1Q13011 328 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 ALG8Q9BVK2 526 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 PCBD2Q9H0N5 130 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 PADI1Q9ULC6 663 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 MDC1Q14676 2089 aaKnown RBP3.54□□□□□ -1.84
SYNE2-202ENST00000344113 SCN1AP35498 2009 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 LEFTY1O75610 366 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 CLEC2LP0C7M8 214 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 GK5Q6ZS86 529 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 IGDCC3Q8IVU1 814 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 OR10H5Q8NGA6 315 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 OR5H2Q8NGV7 314 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 OR2G2Q8NGZ5 317 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 DCUN1D4Q92564 292 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 SPANXB1Q9NS25 103 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-202ENST00000344113 P4HTMQ9NXG6 502 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 AKAIN1P0CW23 69 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 HNRNPA0Q13151 305 aaKnown RBP3.53□□□□□ -1.84
SYNE2-202ENST00000344113 FAM69BQ5VUD6 431 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 BOLLQ8N9W6 283 aaKnown RBP3.53□□□□□ -1.84
SYNE2-202ENST00000344113 BRIX1Q8TDN6 353 aaKnown RBP3.53□□□□□ -1.84
SYNE2-202ENST00000344113 COLEC11Q9BWP8 271 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 TMEM121BQ9BXQ6 578 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-202ENST00000344113 CSNK1G1Q9HCP0 422 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 CREBZFQ9NS37 354 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 LRIT2A6NDA9 550 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 SLC25A17O43808 307 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 CH25HO95992 272 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 HLA-DQA2P01906 255 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 SERPINE2P07093 398 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 IL27RAQ6UWB1 636 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 LHFPL4Q7Z7J7 247 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 AGBL5Q8NDL9 886 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 WDR18Q9BV38 432 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 SSBP4Q9BWG4 385 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-202ENST00000344113 UBQLN4Q9NRR5 601 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 H3BMH7 237 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 CTNSO60931 367 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 KLF8O95600 359 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-202ENST00000344113 CA3P07451 260 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 GABRR2P28476 465 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 RTL8BQ17RB0 113 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 RAET1LQ5VY80 246 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 CMTM1Q8IZ96 169 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 CISD2Q8N5K1 135 aaKnown RBP3.53□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF48Q96MX3 618 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-202ENST00000344113 DOHHQ9BU89 302 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 AGO4Q9HCK5 861 aaKnown RBP3.53□□□□□ -1.84
SYNE2-202ENST00000344113 ASB6Q9NWX5 421 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 CACNG4Q9UBN1 327 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 TRNP1Q6NT89 227 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 NRARPQ7Z6K4 114 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 OR51A2Q8NGJ7 313 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 OR5L1Q8NGL2 311 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 IMMP2LQ96T52 175 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 NIPSNAP1Q9BPW8 284 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF442Q9H7R0 627 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 IL20RAQ9UHF4 553 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 UBIAD1Q9Y5Z9 338 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 GRM5P41594 1212 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 ACTR1BP42025 376 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 PREPP48147 710 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 CELF3Q5SZQ8 465 aaKnown RBP3.53□□□□□ -1.84
SYNE2-202ENST00000344113 MOB3CQ70IA8 216 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 BHLHE23Q8NDY6 225 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 TIFAQ96CG3 184 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 GABARAPL1Q9H0R8 117 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 ABCA6Q8N139 1617 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 DAPL1A0PJW8 107 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 DHRS7CA6NNS2 312 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 PMP2P02689 132 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 GRM4Q14833 912 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 METTL7BQ6UX53 244 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 CUZD1Q86UP6 607 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms