RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 HCN1O60741 890 aa17.06■□□□□ 0.32
HOXA9-201ENST00000343483 UBL4AP11441 157 aa17.06■□□□□ 0.32
HOXA9-201ENST00000343483 TMEM44Q2T9K0 475 aa17.06■□□□□ 0.32
HOXA9-201ENST00000343483 AGAP7PQ5VUJ5 663 aa17.06■□□□□ 0.32
HOXA9-201ENST00000343483 PLBD1Q6P4A8 553 aa17.06■□□□□ 0.32
HOXA9-201ENST00000343483 CXXC5Q7LFL8 322 aaKnown RBP17.06■□□□□ 0.32
HOXA9-201ENST00000343483 C7orf57Q8NEG2 295 aa17.06■□□□□ 0.32
HOXA9-201ENST00000343483 NAT6Q93015 286 aa17.06■□□□□ 0.32
HOXA9-201ENST00000343483 TMEM203Q969S6 136 aa17.06■□□□□ 0.32
HOXA9-201ENST00000343483 NACC2Q96BF6 587 aa17.06■□□□□ 0.32
HOXA9-201ENST00000343483 SP140LQ9H930 580 aa17.06■□□□□ 0.32
HOXA9-201ENST00000343483 SIAEQ9HAT2 523 aa17.06■□□□□ 0.32
HOXA9-201ENST00000343483 REM1O75628 298 aa17.05■□□□□ 0.32
HOXA9-201ENST00000343483 SCRG1O75711 98 aa17.05■□□□□ 0.32
HOXA9-201ENST00000343483 NR0B1P51843 470 aaKnown RBP17.05■□□□□ 0.32
HOXA9-201ENST00000343483 NXNL2Q5VZ03 156 aa17.05■□□□□ 0.32
HOXA9-201ENST00000343483 DESI1Q6ICB0 168 aa17.05■□□□□ 0.32
HOXA9-201ENST00000343483 PWWP2BQ6NUJ5 590 aa17.05■□□□□ 0.32
HOXA9-201ENST00000343483 RABEPKQ7Z6M1 372 aa17.05■□□□□ 0.32
HOXA9-201ENST00000343483 ZNF440Q8IYI8 595 aa17.05■□□□□ 0.32
HOXA9-201ENST00000343483 CADM3Q8N126 398 aa17.05■□□□□ 0.32
HOXA9-201ENST00000343483 LNX2Q8N448 690 aa17.05■□□□□ 0.32
HOXA9-201ENST00000343483 STT3BQ8TCJ2 826 aa17.05■□□□□ 0.32
HOXA9-201ENST00000343483 SLC30A2Q9BRI3 323 aa17.05■□□□□ 0.32
HOXA9-201ENST00000343483 TXNL4BQ9NX01 149 aaKnown RBP17.05■□□□□ 0.32
HOXA9-201ENST00000343483 RARRES3Q9UL19 164 aa17.05■□□□□ 0.32
HOXA9-201ENST00000343483 CAB39Q9Y376 341 aaPredicted RBP17.05■□□□□ 0.32
HOXA9-201ENST00000343483 ADAMTS20P59510 1910 aa17.05■□□□□ 0.32
HOXA9-201ENST00000343483 GPR179Q6PRD1 2367 aa17.05■□□□□ 0.32
HOXA9-201ENST00000343483 LOC110117498-PIK3R3F6TDL0 507 aa17.05■□□□□ 0.32
HOXA9-201ENST00000343483 GTPBP1O00178 669 aaKnown RBP17.05■□□□□ 0.32
HOXA9-201ENST00000343483 SOCS6O14544 535 aa17.05■□□□□ 0.32
HOXA9-201ENST00000343483 IL12BP29460 328 aa17.05■□□□□ 0.32
HOXA9-201ENST00000343483 GPR143P51810 404 aa17.05■□□□□ 0.32
HOXA9-201ENST00000343483 CDC20Q12834 499 aa17.05■□□□□ 0.32
HOXA9-201ENST00000343483 FCRLBQ6BAA4 426 aa17.05■□□□□ 0.32
HOXA9-201ENST00000343483 APOOLQ6UXV4 268 aa17.05■□□□□ 0.32
HOXA9-201ENST00000343483 LINC00114Q6XXX2 140 aa17.05■□□□□ 0.32
HOXA9-201ENST00000343483 OR1N1Q8NGS0 311 aa17.05■□□□□ 0.32
HOXA9-201ENST00000343483 IFI44Q8TCB0 444 aa17.05■□□□□ 0.32
HOXA9-201ENST00000343483 DNAJA4Q8WW22 397 aaPredicted RBP17.05■□□□□ 0.32
HOXA9-201ENST00000343483 TM9SF4Q92544 642 aa17.05■□□□□ 0.32
HOXA9-201ENST00000343483 HTRA1Q92743 480 aa17.05■□□□□ 0.32
HOXA9-201ENST00000343483 TNFRSF13CQ96RJ3 184 aa17.05■□□□□ 0.32
HOXA9-201ENST00000343483 WWTR1Q9GZV5 400 aa17.05■□□□□ 0.32
HOXA9-201ENST00000343483 RERGLQ9H628 205 aa17.05■□□□□ 0.32
HOXA9-201ENST00000343483 PI4KAP42356 2102 aa17.04■□□□□ 0.32
HOXA9-201ENST00000343483 TNRC6BQ9UPQ9 1833 aaKnown RBP17.04■□□□□ 0.32
HOXA9-201ENST00000343483 SEC16AO15027 2179 aa17.04■□□□□ 0.32
HOXA9-201ENST00000343483 IGHV3-20A0A0C4DH32 117 aa17.04■□□□□ 0.32
HOXA9-201ENST00000343483 PLD2O14939 933 aa17.04■□□□□ 0.32
HOXA9-201ENST00000343483 RGS5O15539 181 aa17.04■□□□□ 0.32
HOXA9-201ENST00000343483 OIP5O43482 229 aa17.04■□□□□ 0.32
HOXA9-201ENST00000343483 ICOSLGO75144 302 aa17.04■□□□□ 0.32
HOXA9-201ENST00000343483 LIMS3P0CW19 117 aa17.04■□□□□ 0.32
HOXA9-201ENST00000343483 LIMS4P0CW20 117 aa17.04■□□□□ 0.32
HOXA9-201ENST00000343483 HTR1FP30939 366 aa17.04■□□□□ 0.32
HOXA9-201ENST00000343483 TNFSF8P32971 234 aa17.04■□□□□ 0.32
HOXA9-201ENST00000343483 ATP6V1E1P36543 226 aa17.04■□□□□ 0.32
HOXA9-201ENST00000343483 DCAF7P61962 342 aa17.04■□□□□ 0.32
HOXA9-201ENST00000343483 DAB2P98082 770 aa17.04■□□□□ 0.32
HOXA9-201ENST00000343483 RUNX1T1Q06455 604 aa17.04■□□□□ 0.32
HOXA9-201ENST00000343483 SKP2Q13309 424 aa17.04■□□□□ 0.32
HOXA9-201ENST00000343483 NKAIN1Q4KMZ8 207 aa17.04■□□□□ 0.32
HOXA9-201ENST00000343483 TRIM61Q5EBN2 209 aa17.04■□□□□ 0.32
HOXA9-201ENST00000343483 FNDC7Q5VTL7 733 aa17.04■□□□□ 0.32
HOXA9-201ENST00000343483 PEAR1Q5VY43 1037 aaPredicted RBP17.04■□□□□ 0.32
HOXA9-201ENST00000343483 C22orf42Q6IC83 251 aa17.04■□□□□ 0.32
HOXA9-201ENST00000343483 CBLN3Q6UW01 205 aa17.04■□□□□ 0.32
HOXA9-201ENST00000343483 SLC29A4Q7RTT9 530 aa17.04■□□□□ 0.32
HOXA9-201ENST00000343483 FAM71CQ8NEG0 241 aa17.04■□□□□ 0.32
HOXA9-201ENST00000343483 OR4F15Q8NGB8 312 aa17.04■□□□□ 0.32
HOXA9-201ENST00000343483 ATOH1Q92858 354 aaPredicted RBP17.04■□□□□ 0.32
HOXA9-201ENST00000343483 UFD1Q92890 307 aa17.04■□□□□ 0.32
HOXA9-201ENST00000343483 TPK1Q9H3S4 243 aa17.04■□□□□ 0.32
HOXA9-201ENST00000343483 MED20Q9H944 212 aa17.04■□□□□ 0.32
HOXA9-201ENST00000343483 CPNE5Q9HCH3 593 aa17.04■□□□□ 0.32
HOXA9-201ENST00000343483 ISYNA1Q9NPH2 558 aa17.04■□□□□ 0.32
HOXA9-201ENST00000343483 ZFHX2Q9C0A1 2572 aaPredicted RBP17.04■□□□□ 0.32
HOXA9-201ENST00000343483 A0A087WUJ7 227 aa17.03■□□□□ 0.32
HOXA9-201ENST00000343483 PTP4A3O75365 173 aa17.03■□□□□ 0.32
HOXA9-201ENST00000343483 CDRT1O95170 752 aa17.03■□□□□ 0.32
HOXA9-201ENST00000343483 SLC1A3P43003 542 aa17.03■□□□□ 0.32
HOXA9-201ENST00000343483 RPS25P62851 125 aaKnown RBP17.03■□□□□ 0.32
HOXA9-201ENST00000343483 FOXK2Q01167 660 aa17.03■□□□□ 0.32
HOXA9-201ENST00000343483 MXD1Q05195 221 aa17.03■□□□□ 0.32
HOXA9-201ENST00000343483 PLCXD2Q0VAA5 305 aa17.03■□□□□ 0.32
HOXA9-201ENST00000343483 PHF19Q5T6S3 580 aa17.03■□□□□ 0.32
HOXA9-201ENST00000343483 LHFPL3Q86UP9 236 aa17.03■□□□□ 0.32
HOXA9-201ENST00000343483 C3orf49Q96BT1 292 aa17.03■□□□□ 0.32
HOXA9-201ENST00000343483 TOR4AQ9NXH8 423 aa17.03■□□□□ 0.32
HOXA9-201ENST00000343483 FBXO4Q9UKT5 387 aa17.03■□□□□ 0.32
HOXA9-201ENST00000343483 YARS2Q9Y2Z4 477 aaKnown RBP17.03■□□□□ 0.32
HOXA9-201ENST00000343483 ZNF264O43296 627 aa17.03■□□□□ 0.32
HOXA9-201ENST00000343483 PPP1R3DO95685 299 aa17.03■□□□□ 0.32
HOXA9-201ENST00000343483 DLGAP3O95886 979 aa17.03■□□□□ 0.32
HOXA9-201ENST00000343483 NOS3P29474 1203 aa17.03■□□□□ 0.32
HOXA9-201ENST00000343483 CD79BP40259 229 aa17.03■□□□□ 0.32
HOXA9-201ENST00000343483 ADH7P40394 386 aa17.03■□□□□ 0.32
HOXA9-201ENST00000343483 DBPQ10586 325 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms