RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 DVL3Q92997 716 aaPredicted RBP13.75□□□□□ -0.21
CLCN1-201ENST00000343257 GIMAP5Q96F15 307 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 ZNF75AQ96N20 296 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 CASD1Q96PB1 797 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 CHST6Q9GZX3 395 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 SLC25A13Q9UJS0 675 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 PCYT1BQ9Y5K3 369 aaPredicted RBP13.75□□□□□ -0.21
CLCN1-201ENST00000343257 OR5K4A6NMS3 321 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 NRG2O14511 850 aaPredicted RBP13.75□□□□□ -0.21
CLCN1-201ENST00000343257 ZIC2O95409 532 aaPredicted RBP13.75□□□□□ -0.21
CLCN1-201ENST00000343257 CTSAP10619 480 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 SOX2P48431 317 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 ART1P52961 327 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 NRG3P56975 720 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 FOXK2Q01167 660 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 BDH1Q02338 343 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 C4orf46Q504U0 113 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 UBE2NLQ5JXB2 153 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 UBE3DQ7Z6J8 389 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 SPICQ8N5J4 248 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 FAM98AQ8NCA5 519 aaKnown RBP13.75□□□□□ -0.21
CLCN1-201ENST00000343257 NANPQ8TBE9 248 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 ZNF689Q96CS4 500 aaPredicted RBP13.75□□□□□ -0.21
CLCN1-201ENST00000343257 SLC25A38Q96DW6 304 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 PBX4Q9BYU1 374 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 STARD7Q9NQZ5 370 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 SLC22A11Q9NSA0 550 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 TRAV20A0A0B4J274 112 aa13.74□□□□□ -0.21
CLCN1-201ENST00000343257 A0A0G2JPF8 293 aa13.74□□□□□ -0.21
CLCN1-201ENST00000343257 LINC00587B1AMM8 73 aa13.74□□□□□ -0.21
CLCN1-201ENST00000343257 HNRNPCL3B7ZW38 293 aa13.74□□□□□ -0.21
CLCN1-201ENST00000343257 PRSS44E7EML9 344 aa13.74□□□□□ -0.21
CLCN1-201ENST00000343257 PRAMEF2O60811 474 aa13.74□□□□□ -0.21
CLCN1-201ENST00000343257 HNRNPCL4P0DMR1 293 aa13.74□□□□□ -0.21
CLCN1-201ENST00000343257 TIMP2P16035 220 aa13.74□□□□□ -0.21
CLCN1-201ENST00000343257 GALP22466 123 aa13.74□□□□□ -0.21
CLCN1-201ENST00000343257 GABRR2P28476 465 aa13.74□□□□□ -0.21
CLCN1-201ENST00000343257 GUCA2BQ16661 112 aa13.74□□□□□ -0.21
CLCN1-201ENST00000343257 AKIRIN2Q53H80 203 aa13.74□□□□□ -0.21
CLCN1-201ENST00000343257 FAM199XQ6PEV8 388 aaPredicted RBP13.74□□□□□ -0.21
CLCN1-201ENST00000343257 WDR88Q6ZMY6 472 aa13.74□□□□□ -0.21
CLCN1-201ENST00000343257 ZNF793Q6ZN11 406 aa13.74□□□□□ -0.21
CLCN1-201ENST00000343257 FAM129CQ86XR2 697 aa13.74□□□□□ -0.21
CLCN1-201ENST00000343257 MUC20Q8N307 709 aaPredicted RBP13.74□□□□□ -0.21
CLCN1-201ENST00000343257 LINC00469Q8N7U9 141 aa13.74□□□□□ -0.21
CLCN1-201ENST00000343257 CD180Q99467 661 aa13.74□□□□□ -0.21
CLCN1-201ENST00000343257 CAPN10Q9HC96 672 aa13.74□□□□□ -0.21
CLCN1-201ENST00000343257 SIDT1Q9NXL6 827 aaKnown RBP13.74□□□□□ -0.21
CLCN1-201ENST00000343257 PURGQ9UJV8 347 aaKnown RBP13.74□□□□□ -0.21
CLCN1-201ENST00000343257 FAM171A2A8MVW0 826 aa13.74□□□□□ -0.21
CLCN1-201ENST00000343257 KCNAB3O43448 404 aa13.74□□□□□ -0.21
CLCN1-201ENST00000343257 CDK2P24941 298 aa13.74□□□□□ -0.21
CLCN1-201ENST00000343257 P2RX1P51575 399 aa13.74□□□□□ -0.21
CLCN1-201ENST00000343257 DLX5P56178 289 aa13.74□□□□□ -0.21
CLCN1-201ENST00000343257 FGL1Q08830 312 aa13.74□□□□□ -0.21
CLCN1-201ENST00000343257 ODF4Q2M2E3 257 aa13.74□□□□□ -0.21
CLCN1-201ENST00000343257 PABPC1L2AQ5JQF8 200 aa13.74□□□□□ -0.21
CLCN1-201ENST00000343257 MPP7Q5T2T1 576 aa13.74□□□□□ -0.21
CLCN1-201ENST00000343257 DMKNQ6E0U4 476 aaPredicted RBP13.74□□□□□ -0.21
CLCN1-201ENST00000343257 TMEM25Q86YD3 366 aa13.74□□□□□ -0.21
CLCN1-201ENST00000343257 DUSP19Q8WTR2 217 aa13.74□□□□□ -0.21
CLCN1-201ENST00000343257 NSMAFQ92636 917 aa13.74□□□□□ -0.21
CLCN1-201ENST00000343257 WDR34Q96EX3 536 aa13.74□□□□□ -0.21
CLCN1-201ENST00000343257 ADGRL4Q9HBW9 690 aa13.74□□□□□ -0.21
CLCN1-201ENST00000343257 PPIL1Q9Y3C6 166 aa13.74□□□□□ -0.21
CLCN1-201ENST00000343257 LIPCP11150 499 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 NT5EP21589 574 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 LUMP51884 338 aaPredicted RBP13.73□□□□□ -0.21
CLCN1-201ENST00000343257 UBE2IP63279 158 aaKnown RBP13.73□□□□□ -0.21
CLCN1-201ENST00000343257 DHODHQ02127 395 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 CBFBQ13951 182 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 NUP43Q8NFH3 380 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 FIBINQ8TAL6 211 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 GRHL3Q8TE85 626 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 SNX33Q8WV41 574 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 PNPLA2Q96AD5 504 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 TIFAQ96CG3 184 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 CNRIP1Q96F85 164 aaPredicted RBP13.73□□□□□ -0.21
CLCN1-201ENST00000343257 AIF1LQ9BQI0 150 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 C1QTNF2Q9BXJ5 285 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 DNTTIP1Q9H147 329 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 XKR8Q9H6D3 395 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 MED9Q9NWA0 146 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 FAM86C2PA6NEL3 165 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 IMPA2O14732 288 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 GSTZ1O43708 216 aaPredicted RBP13.73□□□□□ -0.21
CLCN1-201ENST00000343257 PRICKLE3O43900 615 aaPredicted RBP13.73□□□□□ -0.21
CLCN1-201ENST00000343257 OR2A4O95047 310 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 RPP14O95059 124 aaKnown RBP13.73□□□□□ -0.21
CLCN1-201ENST00000343257 PCDH8O95206 1070 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 PVALBP20472 110 aaPredicted RBP13.73□□□□□ -0.21
CLCN1-201ENST00000343257 EPHA4P54764 986 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 UBXN2BQ14CS0 331 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 CSRP2Q16527 193 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 DECR1Q16698 335 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 PCGF3Q3KNV8 242 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 Q6ZNB5 142 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 NDUFAF7Q7L592 441 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 SLC16A13Q7RTY0 426 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 OR2A7Q96R45 310 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms