RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 TMX2-CTNND1H3BSU7 103 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 HOXB5P09067 269 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 BRCC3P46736 316 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 SEC61A1P61619 476 aaKnown RBP16.6■□□□□ 0.25
SMAD4-201ENST00000342988 ENDOGQ14249 297 aaKnown RBP16.6■□□□□ 0.25
SMAD4-201ENST00000342988 OR13C8Q8NGS7 320 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 FAM71F1Q96KD3 344 aaPredicted RBP16.6■□□□□ 0.25
SMAD4-201ENST00000342988 TIMM8AO60220 97 aaPredicted RBP16.6■□□□□ 0.25
SMAD4-201ENST00000342988 STATHP02808 62 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 MYF6P23409 242 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 CXADRP78310 365 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 ZNF91Q05481 1191 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 MGAT3Q09327 533 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 HES1Q14469 280 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 B3GNTL1Q67FW5 361 aaPredicted RBP16.6■□□□□ 0.25
SMAD4-201ENST00000342988 SGPP1Q9BX95 441 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 NXF5Q9H1B4 397 aaKnown RBP16.6■□□□□ 0.25
SMAD4-201ENST00000342988 RIMS4Q9H426 269 aaPredicted RBP16.6■□□□□ 0.25
SMAD4-201ENST00000342988 NOX3Q9HBY0 568 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 DOCK6Q96HP0 2047 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 MANEALQ5VSG8 457 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 NDRG1Q92597 394 aaKnown RBP16.6■□□□□ 0.25
SMAD4-201ENST00000342988 OR5K3A6NET4 321 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 SLC9B1P1A6NJY1 282 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 EBPQ15125 230 aaKnown RBP16.59■□□□□ 0.25
SMAD4-201ENST00000342988 TESK1Q15569 626 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 RTL8BQ17RB0 113 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 KDM4DQ6B0I6 523 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 UCN3Q969E3 161 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 SFXN2Q96NB2 322 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 V9GY05 133 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 TNFRSF10AO00220 468 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 NKX2-5P52952 324 aaPredicted RBP16.59■□□□□ 0.25
SMAD4-201ENST00000342988 BPIFB3P59826 476 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 SUSD1Q6UWL2 747 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 TMEM18Q96B42 140 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 ADGRB1O14514 1584 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 TMEM82A0PJX8 343 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 NUPL2O15504 423 aaKnown RBP16.59■□□□□ 0.25
SMAD4-201ENST00000342988 NDUFB2O95178 105 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 STSP08842 583 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 POLR2CP19387 275 aaPredicted RBP16.59■□□□□ 0.25
SMAD4-201ENST00000342988 GIFP27352 417 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 NRLP54845 237 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 JOSD2Q8TAC2 188 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 LRRC3CA6NJW4 275 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 DUSP28Q4G0W2 176 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 APOOLQ6UXV4 268 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 CNEP1R1Q8N9A8 125 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 YIPF5Q969M3 257 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 RARRES3Q9UL19 164 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 ZNF337Q9Y3M9 751 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 OR6C68A6NDL8 312 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 G3V3Q6 166 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 IGHG1P01857 330 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 GDF6Q6KF10 455 aaPredicted RBP16.59■□□□□ 0.25
SMAD4-201ENST00000342988 C11orf42Q8N5U0 333 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 OR4K13Q8NH42 304 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 DDAH2O95865 285 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 SLC11A1P49279 550 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 SLC51BQ86UW2 128 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 CMTM3Q96MX0 182 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 PADI3Q9ULW8 664 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 OMGP23515 440 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 ADIPOR2Q86V24 386 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 TANKQ92844 425 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 CDS1Q92903 461 aa16.59■□□□□ 0.25
SMAD4-201ENST00000342988 ZNF17P17021 662 aa16.58■□□□□ 0.25
SMAD4-201ENST00000342988 PIN1Q13526 163 aaPredicted RBP16.58■□□□□ 0.25
SMAD4-201ENST00000342988 FOLR3P41439 243 aa16.58■□□□□ 0.25
SMAD4-201ENST00000342988 OPCMLQ14982 345 aa16.58■□□□□ 0.25
SMAD4-201ENST00000342988 KLK4Q9Y5K2 254 aa16.58■□□□□ 0.25
SMAD4-201ENST00000342988 SMIM28A0A1B0GU29 152 aa16.58■□□□□ 0.24
SMAD4-201ENST00000342988 NTF3P20783 257 aa16.58■□□□□ 0.24
SMAD4-201ENST00000342988 TEKQ02763 1124 aa16.58■□□□□ 0.24
SMAD4-201ENST00000342988 NLRC3Q7RTR2 1065 aa16.58■□□□□ 0.24
SMAD4-201ENST00000342988 VWDEQ8N2E2 1590 aa16.58■□□□□ 0.24
SMAD4-201ENST00000342988 H7BY64 318 aa16.58■□□□□ 0.24
SMAD4-201ENST00000342988 SPINT2O43291 252 aa16.58■□□□□ 0.24
SMAD4-201ENST00000342988 OR2J3O76001 311 aa16.58■□□□□ 0.24
SMAD4-201ENST00000342988 FPGSQ05932 587 aa16.58■□□□□ 0.24
SMAD4-201ENST00000342988 DGKZQ13574 1117 aa16.58■□□□□ 0.24
SMAD4-201ENST00000342988 LRRC55Q6ZSA7 311 aa16.58■□□□□ 0.24
SMAD4-201ENST00000342988 NLGN4XQ8N0W4 816 aa16.58■□□□□ 0.24
SMAD4-201ENST00000342988 BOD1Q96IK1 185 aa16.58■□□□□ 0.24
SMAD4-201ENST00000342988 GALNT9Q9HCQ5 603 aa16.58■□□□□ 0.24
SMAD4-201ENST00000342988 EXOSC3Q9NQT5 275 aaKnown RBP16.58■□□□□ 0.24
SMAD4-201ENST00000342988 SULT2B1O00204 365 aa16.58■□□□□ 0.24
SMAD4-201ENST00000342988 ACKR3P25106 362 aa16.58■□□□□ 0.24
SMAD4-201ENST00000342988 DTLQ9NZJ0 730 aa16.58■□□□□ 0.24
SMAD4-201ENST00000342988 SIX3O95343 332 aaPredicted RBP16.58■□□□□ 0.24
SMAD4-201ENST00000342988 TGM4P49221 684 aa16.58■□□□□ 0.24
SMAD4-201ENST00000342988 TMEM115Q12893 351 aaPredicted RBP16.58■□□□□ 0.24
SMAD4-201ENST00000342988 OR4C11Q6IEV9 310 aa16.58■□□□□ 0.24
SMAD4-201ENST00000342988 PECRQ9BY49 303 aa16.58■□□□□ 0.24
SMAD4-201ENST00000342988 TMEM212A6NML5 194 aa16.58■□□□□ 0.24
SMAD4-201ENST00000342988 M0QZ24 198 aa16.58■□□□□ 0.24
SMAD4-201ENST00000342988 MAN2B1O00754 1011 aa16.58■□□□□ 0.24
SMAD4-201ENST00000342988 ADAM23O75077 832 aa16.58■□□□□ 0.24
SMAD4-201ENST00000342988 SFTPDP35247 375 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms