RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 WASH6PQ9NQA3 447 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 TBC1D29Q9UFV1 150 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 NPFFR2Q9Y5X5 522 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 ARPC5O15511 151 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 NARSO43776 548 aaKnown RBP6.68□□□□□ -1.34
VCAN-202ENST00000342785 PRAF2O60831 178 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 RBMXL2O75526 392 aaKnown RBP6.68□□□□□ -1.34
VCAN-202ENST00000342785 SNAPC5O75971 98 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 WISP3O95389 354 aaPredicted RBP6.68□□□□□ -1.34
VCAN-202ENST00000342785 PAHP00439 452 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 GRK5P34947 590 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 MTNR1BP49286 362 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 S100A10P60903 97 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 PSPHP78330 225 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 ZNF511Q8NB15 262 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 SLC35A4Q96G79 324 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 DOK1Q99704 481 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 C7orf50Q9BRJ6 194 aaKnown RBP6.68□□□□□ -1.34
VCAN-202ENST00000342785 VN1R3Q9BXE9 311 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 SLIRPQ9GZT3 109 aaKnown RBP6.68□□□□□ -1.34
VCAN-202ENST00000342785 TMEM185BQ9H7F4 350 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 PCDH10Q9P2E7 1040 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 ZNF337Q9Y3M9 751 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 CCL27Q9Y4X3 112 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 CDK5RAP2Q96SN8 1893 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 COL5A3P25940 1745 aaPredicted RBP6.68□□□□□ -1.34
VCAN-202ENST00000342785 TRBV5-3A0A0A0MS03 114 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 TMEM72A0PK05 275 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 CDC14CA4D256 554 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 CDHR4A6H8M9 788 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 FZD7O75084 574 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 APOC3P02656 99 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 MT-ND4P03905 459 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 ARSBP15848 533 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 MAKP20794 623 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 UQCRC1P31930 480 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 AQP2P41181 271 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 YPEL5P62699 121 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 CCDC58Q4VC31 144 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 TRIM43Q96BQ3 446 aaPredicted RBP6.68□□□□□ -1.34
VCAN-202ENST00000342785 ARSGQ96EG1 525 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 CSF3RQ99062 836 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 SDF2Q99470 211 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 URM1Q9BTM9 101 aaKnown RBP6.68□□□□□ -1.34
VCAN-202ENST00000342785 MRI1Q9BV20 369 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 OR2S2Q9NQN1 319 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 NTNG1Q9Y2I2 539 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 RFPL3O75679 317 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 OR2T7P0C7T2 308 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 MYOGP15173 224 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 RBMXP38159 391 aaKnown RBP6.68□□□□□ -1.34
VCAN-202ENST00000342785 RAB38P57729 211 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 MAT1AQ00266 395 aaKnown RBP6.68□□□□□ -1.34
VCAN-202ENST00000342785 TPBGQ13641 420 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 DEFB133Q30KQ1 61 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 CAMKMTQ7Z624 323 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 TMEM150AQ86TG1 271 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 LSM14AQ8ND56 463 aaKnown RBP6.68□□□□□ -1.34
VCAN-202ENST00000342785 OR5L2Q8NGL0 311 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 OR2T27Q8NH04 317 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 DUSP22Q9NRW4 184 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 GMEB2Q9UKD1 530 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 MCM3APO60318 1980 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 RAB3DO95716 219 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 ERCC1P07992 297 aaPredicted RBP6.68□□□□□ -1.34
VCAN-202ENST00000342785 NID1P14543 1247 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 PBX2P40425 430 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 OR1D4P47884 311 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 ANKRD53Q8N9V6 530 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 SLC25A46Q96AG3 418 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 NEDD4LQ96PU5 975 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 TEAD3Q99594 435 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 NEURL2Q9BR09 285 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 TREM1Q9NP99 234 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 OSGIN1Q9UJX0 560 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 H0Y8X5 98 aa6.67□□□□□ -1.34
VCAN-202ENST00000342785 PIP5K1CO60331 668 aa6.67□□□□□ -1.34
VCAN-202ENST00000342785 ZNF217O75362 1048 aa6.67□□□□□ -1.34
VCAN-202ENST00000342785 SLC22A5O76082 557 aa6.67□□□□□ -1.34
VCAN-202ENST00000342785 SLC35E2P0CK97 266 aa6.67□□□□□ -1.34
VCAN-202ENST00000342785 CHRNB1P11230 501 aa6.67□□□□□ -1.34
VCAN-202ENST00000342785 SLC6A8P48029 635 aa6.67□□□□□ -1.34
VCAN-202ENST00000342785 GLO1Q04760 184 aa6.67□□□□□ -1.34
VCAN-202ENST00000342785 SNTA1Q13424 505 aa6.67□□□□□ -1.34
VCAN-202ENST00000342785 SQSTM1Q13501 440 aa6.67□□□□□ -1.34
VCAN-202ENST00000342785 NKPD1Q17RQ9 610 aa6.67□□□□□ -1.34
VCAN-202ENST00000342785 WBP2NLQ6ICG8 309 aa6.67□□□□□ -1.34
VCAN-202ENST00000342785 ZNF620Q6ZNG0 422 aa6.67□□□□□ -1.34
VCAN-202ENST00000342785 SLC16A12Q6ZSM3 486 aa6.67□□□□□ -1.34
VCAN-202ENST00000342785 FAM46BQ96A09 425 aa6.67□□□□□ -1.34
VCAN-202ENST00000342785 MNTQ99583 582 aa6.67□□□□□ -1.34
VCAN-202ENST00000342785 ALG12Q9BV10 488 aa6.67□□□□□ -1.34
VCAN-202ENST00000342785 GALNT9Q9HCQ5 603 aa6.67□□□□□ -1.34
VCAN-202ENST00000342785 HPF1Q9NWY4 346 aa6.67□□□□□ -1.34
VCAN-202ENST00000342785 C19orf53Q9UNZ5 99 aaPredicted RBP6.67□□□□□ -1.34
VCAN-202ENST00000342785 UBR3Q6ZT12 1888 aa6.67□□□□□ -1.34
VCAN-202ENST00000342785 AGAP14A8MT82 685 aa6.67□□□□□ -1.34
VCAN-202ENST00000342785 H3BML4 177 aa6.67□□□□□ -1.34
VCAN-202ENST00000342785 UBL3O95164 117 aa6.67□□□□□ -1.34
VCAN-202ENST00000342785 SBK2P0C263 348 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms