RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 OR6N1Q8NGY5 312 aa17.16■□□□□ 0.34
SMPD1-201ENST00000342245 CD99L2Q8TCZ2 262 aa17.16■□□□□ 0.34
SMPD1-201ENST00000342245 MMP26Q9NRE1 261 aa17.16■□□□□ 0.34
SMPD1-201ENST00000342245 LRFN2Q9ULH4 789 aa17.16■□□□□ 0.34
SMPD1-201ENST00000342245 TXNL1O43396 289 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 VEGFDO43915 354 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 ZNF44P15621 663 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 EPCAMP16422 314 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 GJA1P17302 382 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 AHRP35869 848 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 OMPP47874 163 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 ILF3Q12906 894 aaKnown RBP eCLIP17.15■□□□□ 0.34
SMPD1-201ENST00000342245 ACOT7LQ6ZUV0 252 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 CHST9Q7L1S5 443 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 PARGQ86W56 976 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 TMEM99Q8N816 258 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 STK35Q8TDR2 534 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 CCDC107Q8WV48 283 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 PAAF1Q9BRP4 392 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 ORAI3Q9BRQ5 295 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 CHRDQ9H2X0 955 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 NRIP3Q9NQ35 241 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 UQCC1Q9NVA1 299 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 LHX3Q9UBR4 397 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 ACOD1A6NK06 481 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 ZNF879B4DU55 563 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 SLC31A2O15432 143 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 IGHV2-5P01817 119 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 CD63P08962 238 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 RCC1P18754 421 aaPredicted RBP17.15■□□□□ 0.34
SMPD1-201ENST00000342245 TBXA2RP21731 343 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 LAP3P28838 519 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 PTH2RP49190 550 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 TAS2R41P59536 307 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 TAS2R60P59551 318 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 SPCS3P61009 180 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 RAB4BP61018 213 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 RPS26P62854 115 aaKnown RBP17.15■□□□□ 0.34
SMPD1-201ENST00000342245 PRR5P85299 388 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 SRSF4Q08170 494 aaKnown RBP17.15■□□□□ 0.34
SMPD1-201ENST00000342245 CSRP2Q16527 193 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 ZNF311Q5JNZ3 666 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 TMEM69Q5SWH9 247 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 BEST3Q8N1M1 668 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 GPRC5AQ8NFJ5 357 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 OR10H4Q8NGA5 316 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 HMGB4Q8WW32 186 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 ACOT11Q8WXI4 607 aaPredicted RBP17.15■□□□□ 0.34
SMPD1-201ENST00000342245 GHSRQ92847 366 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 FBXO32Q969P5 355 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 VRK1Q99986 396 aaPredicted RBP17.15■□□□□ 0.34
SMPD1-201ENST00000342245 TREM1Q9NP99 234 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 RNF181Q9P0P0 153 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 PRKAB1Q9Y478 270 aa17.15■□□□□ 0.34
SMPD1-201ENST00000342245 C9orf170A2RU37 121 aa17.14■□□□□ 0.34
SMPD1-201ENST00000342245 SLC22A31A6NKX4 558 aa17.14■□□□□ 0.34
SMPD1-201ENST00000342245 E9PI62 339 aa17.14■□□□□ 0.34
SMPD1-201ENST00000342245 TBX19O60806 448 aa17.14■□□□□ 0.34
SMPD1-201ENST00000342245 MT-ND4LP03901 98 aa17.14■□□□□ 0.34
SMPD1-201ENST00000342245 RLN1P04808 185 aa17.14■□□□□ 0.34
SMPD1-201ENST00000342245 CD1AP06126 327 aa17.14■□□□□ 0.34
SMPD1-201ENST00000342245 CD79AP11912 226 aa17.14■□□□□ 0.34
SMPD1-201ENST00000342245 HOXA6P31267 233 aa17.14■□□□□ 0.34
SMPD1-201ENST00000342245 ST3GAL3Q11203 375 aa17.14■□□□□ 0.34
SMPD1-201ENST00000342245 GPNMBQ14956 572 aa17.14■□□□□ 0.34
SMPD1-201ENST00000342245 ZNF697Q5TEC3 545 aa17.14■□□□□ 0.34
SMPD1-201ENST00000342245 AGTRAPQ6RW13 159 aa17.14■□□□□ 0.34
SMPD1-201ENST00000342245 TPGS1Q6ZTW0 290 aa17.14■□□□□ 0.34
SMPD1-201ENST00000342245 TMEM200AQ86VY9 491 aa17.14■□□□□ 0.34
SMPD1-201ENST00000342245 GTPBP8Q8N3Z3 284 aaPredicted RBP17.14■□□□□ 0.34
SMPD1-201ENST00000342245 RNASE11Q8TAA1 199 aaKnown RBP17.14■□□□□ 0.34
SMPD1-201ENST00000342245 C1orf216Q8TAB5 229 aa17.14■□□□□ 0.34
SMPD1-201ENST00000342245 RAB8BQ92930 207 aa17.14■□□□□ 0.34
SMPD1-201ENST00000342245 MRPL38Q96DV4 380 aaKnown RBP17.14■□□□□ 0.34
SMPD1-201ENST00000342245 FAM46AQ96IP4 442 aaKnown RBP17.14■□□□□ 0.34
SMPD1-201ENST00000342245 COMMD9Q9P000 198 aa17.14■□□□□ 0.34
SMPD1-201ENST00000342245 PPP4R1LQ9P1A2 415 aa17.14■□□□□ 0.34
SMPD1-201ENST00000342245 TAAR2Q9P1P5 351 aa17.14■□□□□ 0.34
SMPD1-201ENST00000342245 NINQ8N4C6 2090 aa17.14■□□□□ 0.33
SMPD1-201ENST00000342245 IGLV3-16A0A075B6K0 115 aa17.14■□□□□ 0.33
SMPD1-201ENST00000342245 C17orf113A0A1B0GUU1 675 aa17.14■□□□□ 0.33
SMPD1-201ENST00000342245 MEIS3P2A8K0S8 358 aa17.14■□□□□ 0.33
SMPD1-201ENST00000342245 DCTDP32321 178 aa17.14■□□□□ 0.33
SMPD1-201ENST00000342245 RAB5CP51148 216 aa17.14■□□□□ 0.33
SMPD1-201ENST00000342245 PNLIPRP2P54317 469 aa17.14■□□□□ 0.33
SMPD1-201ENST00000342245 RHOAP61586 193 aa17.14■□□□□ 0.33
SMPD1-201ENST00000342245 ACTC1P68032 377 aa17.14■□□□□ 0.33
SMPD1-201ENST00000342245 ACTA1P68133 377 aa17.14■□□□□ 0.33
SMPD1-201ENST00000342245 LSM11P83369 360 aaKnown RBP eCLIP17.14■□□□□ 0.33
SMPD1-201ENST00000342245 CBFBQ13951 182 aa17.14■□□□□ 0.33
SMPD1-201ENST00000342245 C9orf152Q5JTZ5 239 aa17.14■□□□□ 0.33
SMPD1-201ENST00000342245 DNM1P46Q6ZS02 220 aa17.14■□□□□ 0.33
SMPD1-201ENST00000342245 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.14■□□□□ 0.33
SMPD1-201ENST00000342245 STOML3Q8TAV4 291 aa17.14■□□□□ 0.33
SMPD1-201ENST00000342245 PINK1Q9BXM7 581 aa17.14■□□□□ 0.33
SMPD1-201ENST00000342245 XKR8Q9H6D3 395 aa17.14■□□□□ 0.33
SMPD1-201ENST00000342245 BCL2L10Q9HD36 194 aa17.14■□□□□ 0.33
SMPD1-201ENST00000342245 CNIH4Q9P003 139 aa17.14■□□□□ 0.33
SMPD1-201ENST00000342245 FOXJ3Q9UPW0 622 aa17.14■□□□□ 0.33
SMPD1-201ENST00000342245 HELZP42694 1942 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms