RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 MAGEE2Q8TD90 523 aaPredicted RBP13.18□□□□□ -0.3
NIPAL3-202ENST00000339255 ZNF184Q99676 751 aaPredicted RBP13.18□□□□□ -0.3
NIPAL3-202ENST00000339255 SLC29A1Q99808 456 aa13.18□□□□□ -0.3
NIPAL3-202ENST00000339255 KLHDC3Q9BQ90 382 aa13.18□□□□□ -0.3
NIPAL3-202ENST00000339255 TUBA8Q9NY65 449 aaPredicted RBP13.18□□□□□ -0.3
NIPAL3-202ENST00000339255 SPIN1Q9Y657 262 aaPredicted RBP13.18□□□□□ -0.3
NIPAL3-202ENST00000339255 MAP1BP46821 2468 aaKnown RBP13.18□□□□□ -0.3
NIPAL3-202ENST00000339255 MGAQ8IWI9 3026 aa13.18□□□□□ -0.3
NIPAL3-202ENST00000339255 TMED7-TICAM2A0A0A6YYA0 188 aa13.18□□□□□ -0.3
NIPAL3-202ENST00000339255 TAF4O00268 1085 aa13.18□□□□□ -0.3
NIPAL3-202ENST00000339255 GSTM3P21266 225 aa13.18□□□□□ -0.3
NIPAL3-202ENST00000339255 PRKACGP22612 351 aa13.18□□□□□ -0.3
NIPAL3-202ENST00000339255 CBLP22681 906 aa13.18□□□□□ -0.3
NIPAL3-202ENST00000339255 CXADRP78310 365 aa13.18□□□□□ -0.3
NIPAL3-202ENST00000339255 FOXD4Q12950 439 aaPredicted RBP13.18□□□□□ -0.3
NIPAL3-202ENST00000339255 HYAL4Q2M3T9 481 aa13.18□□□□□ -0.3
NIPAL3-202ENST00000339255 C1orf94Q6P1W5 598 aa13.18□□□□□ -0.3
NIPAL3-202ENST00000339255 NRMQ8IXM6 262 aa13.18□□□□□ -0.3
NIPAL3-202ENST00000339255 GTPBP8Q8N3Z3 284 aaPredicted RBP13.18□□□□□ -0.3
NIPAL3-202ENST00000339255 GALNT4Q8N4A0 578 aa13.18□□□□□ -0.3
NIPAL3-202ENST00000339255 KDF1Q8NAX2 398 aaPredicted RBP13.18□□□□□ -0.3
NIPAL3-202ENST00000339255 ZFP62Q8NB50 900 aaPredicted RBP13.18□□□□□ -0.3
NIPAL3-202ENST00000339255 OR9Q2Q8NGE9 314 aa13.18□□□□□ -0.3
NIPAL3-202ENST00000339255 SLC25A43Q8WUT9 341 aaPredicted RBP13.18□□□□□ -0.3
NIPAL3-202ENST00000339255 BARD1Q99728 777 aaKnown RBP13.18□□□□□ -0.3
NIPAL3-202ENST00000339255 UBQLN3Q9H347 655 aa13.18□□□□□ -0.3
NIPAL3-202ENST00000339255 KRT84Q9NSB2 600 aa13.18□□□□□ -0.3
NIPAL3-202ENST00000339255 SMPD3Q9NY59 655 aaPredicted RBP13.18□□□□□ -0.3
NIPAL3-202ENST00000339255 CHRNA9Q9UGM1 479 aa13.18□□□□□ -0.3
NIPAL3-202ENST00000339255 POFUT2Q9Y2G5 429 aa13.18□□□□□ -0.3
NIPAL3-202ENST00000339255 TMED7Q9Y3B3 224 aa13.18□□□□□ -0.3
NIPAL3-202ENST00000339255 ZNF208O43345 1280 aa13.17□□□□□ -0.3
NIPAL3-202ENST00000339255 HK1P19367 917 aa13.17□□□□□ -0.3
NIPAL3-202ENST00000339255 GDF1P27539 372 aa13.17□□□□□ -0.3
NIPAL3-202ENST00000339255 CTBP2P56545 445 aa13.17□□□□□ -0.3
NIPAL3-202ENST00000339255 PRKCDQ05655 676 aa13.17□□□□□ -0.3
NIPAL3-202ENST00000339255 COX10Q12887 443 aa13.17□□□□□ -0.3
NIPAL3-202ENST00000339255 FOXF1Q12946 379 aa13.17□□□□□ -0.3
NIPAL3-202ENST00000339255 C3orf33Q6P1S2 294 aa13.17□□□□□ -0.3
NIPAL3-202ENST00000339255 PGBD2Q6P3X8 592 aa13.17□□□□□ -0.3
NIPAL3-202ENST00000339255 CD300LDQ6UXZ3 194 aa13.17□□□□□ -0.3
NIPAL3-202ENST00000339255 PARP8Q8N3A8 854 aa13.17□□□□□ -0.3
NIPAL3-202ENST00000339255 ZNF524Q96C55 264 aa13.17□□□□□ -0.3
NIPAL3-202ENST00000339255 HES7Q9BYE0 225 aa13.17□□□□□ -0.3
NIPAL3-202ENST00000339255 ZNF703Q9H7S9 590 aaPredicted RBP13.17□□□□□ -0.3
NIPAL3-202ENST00000339255 SMURF2Q9HAU4 748 aa13.17□□□□□ -0.3
NIPAL3-202ENST00000339255 PAPOLBQ9NRJ5 636 aaKnown RBP13.17□□□□□ -0.3
NIPAL3-202ENST00000339255 SERINC1Q9NRX5 453 aa13.17□□□□□ -0.3
NIPAL3-202ENST00000339255 QPCTLQ9NXS2 382 aa13.17□□□□□ -0.3
NIPAL3-202ENST00000339255 TUBD1Q9UJT1 453 aa13.17□□□□□ -0.3
NIPAL3-202ENST00000339255 DNAJC13O75165 2243 aa13.16□□□□□ -0.3
NIPAL3-202ENST00000339255 A8MVM7 634 aa13.16□□□□□ -0.3
NIPAL3-202ENST00000339255 LINC01387J3KSC0 135 aa13.16□□□□□ -0.3
NIPAL3-202ENST00000339255 ACOT7O00154 380 aa13.16□□□□□ -0.3
NIPAL3-202ENST00000339255 SUSD5O60279 629 aa13.16□□□□□ -0.3
NIPAL3-202ENST00000339255 GLSO94925 669 aaPredicted RBP13.16□□□□□ -0.3
NIPAL3-202ENST00000339255 FPR3P25089 353 aa13.16□□□□□ -0.3
NIPAL3-202ENST00000339255 OMPP47874 163 aa13.16□□□□□ -0.3
NIPAL3-202ENST00000339255 MEOX1P50221 254 aa13.16□□□□□ -0.3
NIPAL3-202ENST00000339255 DAPP51397 102 aa13.16□□□□□ -0.3
NIPAL3-202ENST00000339255 SELENBP1Q13228 472 aa13.16□□□□□ -0.3
NIPAL3-202ENST00000339255 KCNAB2Q13303 367 aa13.16□□□□□ -0.3
NIPAL3-202ENST00000339255 TMEM44Q2T9K0 475 aa13.16□□□□□ -0.3
NIPAL3-202ENST00000339255 TMPRSS11FQ6ZWK6 438 aa13.16□□□□□ -0.3
NIPAL3-202ENST00000339255 ZER1Q7Z7L7 766 aa13.16□□□□□ -0.3
NIPAL3-202ENST00000339255 SLC22A16Q86VW1 577 aa13.16□□□□□ -0.3
NIPAL3-202ENST00000339255 ADGRG3Q86Y34 549 aa13.16□□□□□ -0.3
NIPAL3-202ENST00000339255 GNPDA2Q8TDQ7 276 aa13.16□□□□□ -0.3
NIPAL3-202ENST00000339255 STK35Q8TDR2 534 aa13.16□□□□□ -0.3
NIPAL3-202ENST00000339255 BPIFA2Q96DR5 249 aa13.16□□□□□ -0.3
NIPAL3-202ENST00000339255 PIGQQ9BRB3 760 aa13.16□□□□□ -0.3
NIPAL3-202ENST00000339255 TTTY12Q9BZ98 90 aa13.16□□□□□ -0.3
NIPAL3-202ENST00000339255 OR2B2Q9GZK3 357 aa13.16□□□□□ -0.3
NIPAL3-202ENST00000339255 MEPEQ9NQ76 525 aaPredicted RBP13.16□□□□□ -0.3
NIPAL3-202ENST00000339255 TMEFF2Q9UIK5 374 aaPredicted RBP13.16□□□□□ -0.3
NIPAL3-202ENST00000339255 PINLYPA6NC86 204 aa13.15□□□□□ -0.3
NIPAL3-202ENST00000339255 ZIC3O60481 467 aa13.15□□□□□ -0.3
NIPAL3-202ENST00000339255 GASTP01350 101 aa13.15□□□□□ -0.3
NIPAL3-202ENST00000339255 AQP4P55087 323 aa13.15□□□□□ -0.3
NIPAL3-202ENST00000339255 PLGLB1Q02325 96 aa13.15□□□□□ -0.3
NIPAL3-202ENST00000339255 TSPAN31Q12999 210 aa13.15□□□□□ -0.3
NIPAL3-202ENST00000339255 ZNF169Q14929 603 aaPredicted RBP13.15□□□□□ -0.3
NIPAL3-202ENST00000339255 OR14L1PQ8NHC6 308 aa13.15□□□□□ -0.3
NIPAL3-202ENST00000339255 EXTL1Q92935 676 aa13.15□□□□□ -0.3
NIPAL3-202ENST00000339255 DDIT4LQ96D03 193 aa13.15□□□□□ -0.3
NIPAL3-202ENST00000339255 TACO1Q9BSH4 297 aaKnown RBP13.15□□□□□ -0.3
NIPAL3-202ENST00000339255 UCK2Q9BZX2 261 aa13.15□□□□□ -0.3
NIPAL3-202ENST00000339255 ADNPQ9H2P0 1102 aa13.15□□□□□ -0.3
NIPAL3-202ENST00000339255 ZNF407Q9C0G0 2248 aa13.15□□□□□ -0.3
NIPAL3-202ENST00000339255 IGKV1D-42A0A075B6H8 117 aa13.15□□□□□ -0.31
NIPAL3-202ENST00000339255 KPNA4O00629 521 aaPredicted RBP13.15□□□□□ -0.31
NIPAL3-202ENST00000339255 NPIPB7O75200 414 aa13.15□□□□□ -0.31
NIPAL3-202ENST00000339255 HPNP05981 417 aa13.15□□□□□ -0.31
NIPAL3-202ENST00000339255 IFI30P13284 250 aa13.15□□□□□ -0.31
NIPAL3-202ENST00000339255 GSSP48637 474 aa13.15□□□□□ -0.31
NIPAL3-202ENST00000339255 CLK1P49759 484 aaKnown RBP13.15□□□□□ -0.31
NIPAL3-202ENST00000339255 CRYZQ08257 329 aaKnown RBP13.15□□□□□ -0.31
NIPAL3-202ENST00000339255 TOMM20Q15388 145 aa13.15□□□□□ -0.31
NIPAL3-202ENST00000339255 TAF11Q15544 211 aa13.15□□□□□ -0.31
NIPAL3-202ENST00000339255 INAQ16352 499 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms