RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 FNDC5Q8NAU1 212 aa13.77□□□□□ -0.21
LINC01116-202ENST00000339037 OR10H5Q8NGA6 315 aa13.77□□□□□ -0.21
LINC01116-202ENST00000339037 OR52N5Q8NH56 324 aa13.77□□□□□ -0.21
LINC01116-202ENST00000339037 SLC25A43Q8WUT9 341 aaPredicted RBP13.77□□□□□ -0.21
LINC01116-202ENST00000339037 TMEM234Q8WY98 164 aa13.77□□□□□ -0.21
LINC01116-202ENST00000339037 APH1AQ96BI3 265 aa13.77□□□□□ -0.21
LINC01116-202ENST00000339037 COQ8BQ96D53 544 aa13.77□□□□□ -0.21
LINC01116-202ENST00000339037 TNFRSF13CQ96RJ3 184 aa13.77□□□□□ -0.21
LINC01116-202ENST00000339037 DHRS9Q9BPW9 319 aa13.77□□□□□ -0.21
LINC01116-202ENST00000339037 TMEM109Q9BVC6 243 aa13.77□□□□□ -0.21
LINC01116-202ENST00000339037 LAT2Q9GZY6 243 aa13.77□□□□□ -0.21
LINC01116-202ENST00000339037 CBLN4Q9NTU7 201 aa13.77□□□□□ -0.21
LINC01116-202ENST00000339037 MGAT4BQ9UQ53 548 aa13.77□□□□□ -0.21
LINC01116-202ENST00000339037 IGKV3D-15A0A087WSY6 115 aa13.76□□□□□ -0.21
LINC01116-202ENST00000339037 CIB4A0PJX0 185 aa13.76□□□□□ -0.21
LINC01116-202ENST00000339037 CCT8L1PA6NM43 557 aa13.76□□□□□ -0.21
LINC01116-202ENST00000339037 E7EQL1 145 aa13.76□□□□□ -0.21
LINC01116-202ENST00000339037 ITM2AO43736 263 aa13.76□□□□□ -0.21
LINC01116-202ENST00000339037 DNAJA2O60884 412 aa13.76□□□□□ -0.21
LINC01116-202ENST00000339037 STX11O75558 287 aa13.76□□□□□ -0.21
LINC01116-202ENST00000339037 AK1P00568 194 aa13.76□□□□□ -0.21
LINC01116-202ENST00000339037 CSTAP01040 98 aa13.76□□□□□ -0.21
LINC01116-202ENST00000339037 UBTFL6P0CB48 400 aaPredicted RBP13.76□□□□□ -0.21
LINC01116-202ENST00000339037 PGCP20142 388 aa13.76□□□□□ -0.21
LINC01116-202ENST00000339037 PRPS1L1P21108 318 aa13.76□□□□□ -0.21
LINC01116-202ENST00000339037 PTAFRP25105 342 aa13.76□□□□□ -0.21
LINC01116-202ENST00000339037 ZNF83P51522 516 aa13.76□□□□□ -0.21
LINC01116-202ENST00000339037 HBA1P69905 142 aa13.76□□□□□ -0.21
LINC01116-202ENST00000339037 VLDLRP98155 873 aa13.76□□□□□ -0.21
LINC01116-202ENST00000339037 SPOCK1Q08629 439 aa13.76□□□□□ -0.21
LINC01116-202ENST00000339037 RAB35Q15286 201 aa13.76□□□□□ -0.21
LINC01116-202ENST00000339037 KRT71Q3SY84 523 aa13.76□□□□□ -0.21
LINC01116-202ENST00000339037 EIF3MQ7L2H7 374 aaKnown RBP13.76□□□□□ -0.21
LINC01116-202ENST00000339037 MTDHQ86UE4 582 aaKnown RBP13.76□□□□□ -0.21
LINC01116-202ENST00000339037 RIMKLAQ8IXN7 391 aa13.76□□□□□ -0.21
LINC01116-202ENST00000339037 FBXL14Q8N1E6 418 aa13.76□□□□□ -0.21
LINC01116-202ENST00000339037 MREGQ8N565 214 aa13.76□□□□□ -0.21
LINC01116-202ENST00000339037 HTRA1Q92743 480 aa13.76□□□□□ -0.21
LINC01116-202ENST00000339037 TUBGCP3Q96CW5 907 aa13.76□□□□□ -0.21
LINC01116-202ENST00000339037 ZHX1-C8orf76Q96EF9 292 aa13.76□□□□□ -0.21
LINC01116-202ENST00000339037 BHLHE41Q9C0J9 482 aaPredicted RBP13.76□□□□□ -0.21
LINC01116-202ENST00000339037 ASB6Q9NWX5 421 aa13.76□□□□□ -0.21
LINC01116-202ENST00000339037 TAS2R16Q9NYV7 291 aa13.76□□□□□ -0.21
LINC01116-202ENST00000339037 NOSIPQ9Y314 301 aaKnown RBP13.76□□□□□ -0.21
LINC01116-202ENST00000339037 SPIN1Q9Y657 262 aaPredicted RBP13.76□□□□□ -0.21
LINC01116-202ENST00000339037 CENPVL1A0A0U1RR11 272 aa13.75□□□□□ -0.21
LINC01116-202ENST00000339037 WDR91A4D1P6 747 aa13.75□□□□□ -0.21
LINC01116-202ENST00000339037 ELOA3DA6NLF2 546 aaPredicted RBP13.75□□□□□ -0.21
LINC01116-202ENST00000339037 DUXAA6NLW8 204 aa13.75□□□□□ -0.21
LINC01116-202ENST00000339037 FCMRO60667 390 aa13.75□□□□□ -0.21
LINC01116-202ENST00000339037 TFPIP10646 304 aa13.75□□□□□ -0.21
LINC01116-202ENST00000339037 G6PDP11413 515 aa13.75□□□□□ -0.21
LINC01116-202ENST00000339037 SLC25A16P16260 332 aa13.75□□□□□ -0.21
LINC01116-202ENST00000339037 CD40P25942 277 aa13.75□□□□□ -0.21
LINC01116-202ENST00000339037 CASP9P55211 416 aa13.75□□□□□ -0.21
LINC01116-202ENST00000339037 LOXL1Q08397 574 aaPredicted RBP13.75□□□□□ -0.21
LINC01116-202ENST00000339037 PDK3Q15120 406 aa13.75□□□□□ -0.21
LINC01116-202ENST00000339037 ZNF141Q15928 474 aa13.75□□□□□ -0.21
LINC01116-202ENST00000339037 ELOA3BQ3SY89 546 aa13.75□□□□□ -0.21
LINC01116-202ENST00000339037 NUDCD3Q8IVD9 361 aa13.75□□□□□ -0.21
LINC01116-202ENST00000339037 ZNF525Q8N782 197 aa13.75□□□□□ -0.21
LINC01116-202ENST00000339037 ZNF781Q8N8C0 355 aa13.75□□□□□ -0.21
LINC01116-202ENST00000339037 ELOA3Q8NG57 546 aa13.75□□□□□ -0.21
LINC01116-202ENST00000339037 DUSP26Q9BV47 211 aa13.75□□□□□ -0.21
LINC01116-202ENST00000339037 BEX2Q9BXY8 128 aa13.75□□□□□ -0.21
LINC01116-202ENST00000339037 SERHL2Q9H4I8 314 aa13.75□□□□□ -0.21
LINC01116-202ENST00000339037 MANSC1Q9H8J5 431 aa13.75□□□□□ -0.21
LINC01116-202ENST00000339037 ACER3Q9NUN7 267 aa13.75□□□□□ -0.21
LINC01116-202ENST00000339037 MALT1Q9UDY8 824 aa13.75□□□□□ -0.21
LINC01116-202ENST00000339037 KCNE5Q9UJ90 142 aa13.75□□□□□ -0.21
LINC01116-202ENST00000339037 MKLN1Q9UL63 735 aa13.75□□□□□ -0.21
LINC01116-202ENST00000339037 SLC25A15Q9Y619 301 aa13.75□□□□□ -0.21
LINC01116-202ENST00000339037 RNF103-CHMP3A0A140T963 221 aa13.74□□□□□ -0.21
LINC01116-202ENST00000339037 A0A1W2PR80 420 aa13.74□□□□□ -0.21
LINC01116-202ENST00000339037 ZNF716A6NP11 495 aa13.74□□□□□ -0.21
LINC01116-202ENST00000339037 H7C417 338 aa13.74□□□□□ -0.21
LINC01116-202ENST00000339037 M0R1B8 84 aa13.74□□□□□ -0.21
LINC01116-202ENST00000339037 GPR171O14626 319 aa13.74□□□□□ -0.21
LINC01116-202ENST00000339037 UGT2B17O75795 530 aa13.74□□□□□ -0.21
LINC01116-202ENST00000339037 MATN1P21941 496 aa13.74□□□□□ -0.21
LINC01116-202ENST00000339037 FABP6P51161 128 aa13.74□□□□□ -0.21
LINC01116-202ENST00000339037 PDCD2Q16342 344 aaPredicted RBP13.74□□□□□ -0.21
LINC01116-202ENST00000339037 OR7E24Q6IFN5 339 aa13.74□□□□□ -0.21
LINC01116-202ENST00000339037 B3GLCTQ6Y288 498 aa13.74□□□□□ -0.21
LINC01116-202ENST00000339037 C16orf62Q7Z3J2 963 aa13.74□□□□□ -0.21
LINC01116-202ENST00000339037 PIGXQ8TBF5 258 aa13.74□□□□□ -0.21
LINC01116-202ENST00000339037 FAM168AQ92567 244 aa13.74□□□□□ -0.21
LINC01116-202ENST00000339037 ZBTB9Q96C00 473 aa13.74□□□□□ -0.21
LINC01116-202ENST00000339037 PPP1R36Q96LQ0 422 aa13.74□□□□□ -0.21
LINC01116-202ENST00000339037 INPP5KQ9BT40 448 aa13.74□□□□□ -0.21
LINC01116-202ENST00000339037 C20orf27Q9GZN8 174 aa13.74□□□□□ -0.21
LINC01116-202ENST00000339037 ZNF350Q9GZX5 532 aa13.74□□□□□ -0.21
LINC01116-202ENST00000339037 CHRNA9Q9UGM1 479 aa13.74□□□□□ -0.21
LINC01116-202ENST00000339037 ANKRD28O15084 1053 aa13.73□□□□□ -0.21
LINC01116-202ENST00000339037 DNPH1O43598 174 aa13.73□□□□□ -0.21
LINC01116-202ENST00000339037 KIAA0513O60268 411 aa13.73□□□□□ -0.21
LINC01116-202ENST00000339037 MRPL33O75394 65 aaKnown RBP13.73□□□□□ -0.21
LINC01116-202ENST00000339037 BMP4P12644 408 aa13.73□□□□□ -0.21
LINC01116-202ENST00000339037 APOBEC1P41238 236 aaKnown RBP13.73□□□□□ -0.21
LINC01116-202ENST00000339037 CHI3L2Q15782 390 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms