RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 VEGFDO43915 354 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 CREBL2O60519 120 aaPredicted RBP13.1□□□□□ -0.31
PCDH8-201ENST00000338862 KRT33AO76009 404 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 EPPINO95925 133 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 SBK2P0C263 348 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 TFPIP10646 304 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 RBMS1P29558 406 aaKnown RBP13.1□□□□□ -0.31
PCDH8-201ENST00000338862 MAP2K6P52564 334 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 PDGFRLQ15198 375 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 TAF13Q15543 124 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 LIN54Q6MZP7 749 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 CMTM4Q8IZR5 234 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 OR2L5Q8NG80 312 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 CASTOR1Q8WTX7 329 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 CNOT9Q92600 299 aaKnown RBP13.1□□□□□ -0.31
PCDH8-201ENST00000338862 SLC25A36Q96CQ1 311 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 MS4A6EQ96DS6 147 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 GSX2Q9BZM3 304 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 PLEKHA6Q9Y2H5 1048 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 PPIL1Q9Y3C6 166 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 DNAH14Q0VDD8 3507 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 KHNYNO15037 678 aaKnown RBP13.1□□□□□ -0.31
PCDH8-201ENST00000338862 DNAJB6O75190 326 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 PEX14O75381 377 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 OR6A2O95222 327 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 FPR3P25089 353 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 FUT5Q11128 374 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 ARHGEF6Q15052 776 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 FAM74A1Q5RGS3 127 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 TIGD3Q6B0B8 471 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 HEPHL1Q6MZM0 1159 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 KIAA0907Q7Z7F0 614 aaPredicted RBP13.1□□□□□ -0.31
PCDH8-201ENST00000338862 OR6N2Q8NGY6 317 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 MED18Q9BUE0 208 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 ZNF436Q9C0F3 470 aaPredicted RBP13.1□□□□□ -0.31
PCDH8-201ENST00000338862 TMEM185BQ9H7F4 350 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 LHX9Q9NQ69 397 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 EDDM13A0A1B0GTR0 161 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 GXYLT2A0PJZ3 443 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 PLGP00747 810 aaPredicted RBP13.1□□□□□ -0.31
PCDH8-201ENST00000338862 F13BP05160 661 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 BIKQ13323 160 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 NKPD1Q17RQ9 610 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 FAM198BQ6UWH4 519 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 NLRC3Q7RTR2 1065 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 JAZF1Q86VZ6 243 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 GPALPP1Q8IXQ4 340 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 OR52N1Q8NH53 320 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 DIO2Q92813 273 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 B3GNT4Q9C0J1 378 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 CREBZFQ9NS37 354 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 APOBEC3BQ9UH17 382 aaKnown RBP13.1□□□□□ -0.31
PCDH8-201ENST00000338862 FAM186AA6NE01 2351 aa13.09□□□□□ -0.31
PCDH8-201ENST00000338862 TRAV18A0A075B6X5 111 aa13.09□□□□□ -0.31
PCDH8-201ENST00000338862 PSMB1P20618 241 aaKnown RBP13.09□□□□□ -0.31
PCDH8-201ENST00000338862 TNK1Q13470 666 aa13.09□□□□□ -0.31
PCDH8-201ENST00000338862 MELKQ14680 651 aa13.09□□□□□ -0.31
PCDH8-201ENST00000338862 LRRN1Q6UXK5 716 aa13.09□□□□□ -0.31
PCDH8-201ENST00000338862 NRSN1Q8IZ57 195 aa13.09□□□□□ -0.31
PCDH8-201ENST00000338862 CHST4Q8NCG5 386 aa13.09□□□□□ -0.31
PCDH8-201ENST00000338862 OR2A1Q8NGT9 310 aa13.09□□□□□ -0.31
PCDH8-201ENST00000338862 RASD2Q96D21 266 aa13.09□□□□□ -0.31
PCDH8-201ENST00000338862 SEC22AQ96IW7 307 aa13.09□□□□□ -0.31
PCDH8-201ENST00000338862 LIN7BQ9HAP6 207 aa13.09□□□□□ -0.31
PCDH8-201ENST00000338862 RP1P56715 2156 aa13.09□□□□□ -0.31
PCDH8-201ENST00000338862 CLEC3AO75596 197 aa13.09□□□□□ -0.31
PCDH8-201ENST00000338862 RP2O75695 350 aa13.09□□□□□ -0.31
PCDH8-201ENST00000338862 C21orf58P58505 322 aa13.09□□□□□ -0.31
PCDH8-201ENST00000338862 HNRNPA1L2Q32P51 320 aaKnown RBP13.09□□□□□ -0.31
PCDH8-201ENST00000338862 AMZ1Q400G9 498 aa13.09□□□□□ -0.31
PCDH8-201ENST00000338862 SPRED2Q7Z698 418 aa13.09□□□□□ -0.31
PCDH8-201ENST00000338862 LRRC56Q8IYG6 542 aaPredicted RBP13.09□□□□□ -0.31
PCDH8-201ENST00000338862 OR56B4Q8NH76 319 aa13.09□□□□□ -0.31
PCDH8-201ENST00000338862 WDR89Q96FK6 387 aaPredicted RBP13.09□□□□□ -0.31
PCDH8-201ENST00000338862 RBM18Q96H35 190 aaKnown RBP13.09□□□□□ -0.31
PCDH8-201ENST00000338862 MRGPRX3Q96LB0 322 aa13.09□□□□□ -0.31
PCDH8-201ENST00000338862 PELI2Q9HAT8 420 aa13.09□□□□□ -0.31
PCDH8-201ENST00000338862 ASB6Q9NWX5 421 aa13.09□□□□□ -0.31
PCDH8-201ENST00000338862 SLC27A6Q9Y2P4 619 aa13.09□□□□□ -0.31
PCDH8-201ENST00000338862 VCANP13611 3396 aa13.09□□□□□ -0.31
PCDH8-201ENST00000338862 TRIM3O75382 744 aaPredicted RBP13.09□□□□□ -0.31
PCDH8-201ENST00000338862 REEP5Q00765 189 aa13.09□□□□□ -0.31
PCDH8-201ENST00000338862 ZNHIT3Q15649 155 aaPredicted RBP13.09□□□□□ -0.31
PCDH8-201ENST00000338862 EIPR1Q53HC9 387 aa13.09□□□□□ -0.31
PCDH8-201ENST00000338862 SLC48A1Q6P1K1 146 aa13.09□□□□□ -0.31
PCDH8-201ENST00000338862 KIAA1324Q6UXG2 1013 aaKnown RBP13.09□□□□□ -0.31
PCDH8-201ENST00000338862 ADAMTS14Q8WXS8 1223 aa13.09□□□□□ -0.31
PCDH8-201ENST00000338862 CXorf58Q96LI9 332 aa13.09□□□□□ -0.31
PCDH8-201ENST00000338862 TAS2R3Q9NYW6 316 aa13.09□□□□□ -0.31
PCDH8-201ENST00000338862 NDOR1Q9UHB4 597 aa13.09□□□□□ -0.31
PCDH8-201ENST00000338862 SCP2D1Q9UJQ7 156 aa13.09□□□□□ -0.31
PCDH8-201ENST00000338862 ATXN7L1Q9ULK2 861 aaPredicted RBP13.09□□□□□ -0.31
PCDH8-201ENST00000338862 SCN8AQ9UQD0 1980 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 TMEM72A0PK05 275 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 KDM4EB2RXH2 506 aaPredicted RBP13.08□□□□□ -0.32
PCDH8-201ENST00000338862 ZNF879B4DU55 563 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 C4orf51C9J302 202 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 TBX6O95947 436 aaPredicted RBP13.08□□□□□ -0.32
PCDH8-201ENST00000338862 AP3S2P59780 193 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 GMFBP60983 142 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms