RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 BHLHE40O14503 412 aa14.09□□□□□ -0.15
LIMS1-202ENST00000338045 GNB5O14775 395 aa14.09□□□□□ -0.15
LIMS1-202ENST00000338045 SURF4O15260 269 aa14.09□□□□□ -0.15
LIMS1-202ENST00000338045 CDC40O60508 579 aaKnown RBP eCLIP14.09□□□□□ -0.15
LIMS1-202ENST00000338045 ITGA10O75578 1167 aa14.09□□□□□ -0.15
LIMS1-202ENST00000338045 MT-ND2P03891 347 aa14.09□□□□□ -0.15
LIMS1-202ENST00000338045 CDK1P06493 297 aa14.09□□□□□ -0.15
LIMS1-202ENST00000338045 BMP7P18075 431 aa14.09□□□□□ -0.15
LIMS1-202ENST00000338045 ITPKBP27987 946 aa14.09□□□□□ -0.15
LIMS1-202ENST00000338045 MASP1P48740 699 aa14.09□□□□□ -0.15
LIMS1-202ENST00000338045 SUMO3P55854 103 aaPredicted RBP14.09□□□□□ -0.15
LIMS1-202ENST00000338045 DNASE1L3Q13609 305 aa14.09□□□□□ -0.15
LIMS1-202ENST00000338045 RAB39AQ14964 217 aa14.09□□□□□ -0.15
LIMS1-202ENST00000338045 TOMM34Q15785 309 aaPredicted RBP14.09□□□□□ -0.15
LIMS1-202ENST00000338045 SYT14P1Q58G82 188 aa14.09□□□□□ -0.15
LIMS1-202ENST00000338045 SMARCD3Q6STE5 483 aa14.09□□□□□ -0.15
LIMS1-202ENST00000338045 OAFQ86UD1 273 aa14.09□□□□□ -0.15
LIMS1-202ENST00000338045 ANKRD13BQ86YJ7 626 aa14.09□□□□□ -0.15
LIMS1-202ENST00000338045 OR52L1Q8NGH7 329 aa14.09□□□□□ -0.15
LIMS1-202ENST00000338045 GPR119Q8TDV5 335 aa14.09□□□□□ -0.15
LIMS1-202ENST00000338045 LIPHQ8WWY8 451 aa14.09□□□□□ -0.15
LIMS1-202ENST00000338045 MYDGFQ969H8 173 aa14.09□□□□□ -0.15
LIMS1-202ENST00000338045 SGTBQ96EQ0 304 aa14.09□□□□□ -0.15
LIMS1-202ENST00000338045 TEX12Q9BXU0 123 aa14.09□□□□□ -0.15
LIMS1-202ENST00000338045 CCDC90BQ9GZT6 254 aa14.09□□□□□ -0.15
LIMS1-202ENST00000338045 ENKD1Q9H0I2 346 aa14.09□□□□□ -0.15
LIMS1-202ENST00000338045 SPAARA0A1B0GVQ0 90 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 EFCAB10A6NFE3 127 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 TPPPO94811 219 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 HPP00738 406 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 HMGN1P05114 100 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 PIPP12273 146 aaPredicted RBP14.08□□□□□ -0.16
LIMS1-202ENST00000338045 ICAM2P13598 275 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 F8A1P23610 371 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 TACR3P29371 465 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 OTX2P32243 289 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 PTGDSP41222 190 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 SLC9A3P48764 834 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 MVKQ03426 396 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 EGR4Q05215 589 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 COL28A1Q2UY09 1125 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 THSD4Q6ZMP0 1018 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 SLC46A3Q7Z3Q1 461 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 LNX2Q8N448 690 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 SVOPQ8N4V2 548 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 OR10G3Q8NGC4 313 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 MUL1Q969V5 352 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 LRR1Q96L50 414 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 MCCC2Q9HCC0 563 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 GPR83Q9NYM4 423 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 DNAJC27Q9NZQ0 273 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 IL20RAQ9UHF4 553 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 YARS2Q9Y2Z4 477 aaKnown RBP14.08□□□□□ -0.16
LIMS1-202ENST00000338045 PCDHGB6Q9Y5F9 930 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 TRAV27A0A087WT01 109 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 IGLV3-32A0A0A0MS00 114 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 B4DXG7 233 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 RAD1O60671 282 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 SEC14L2O76054 403 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 CSRP1P21291 193 aaKnown RBP14.08□□□□□ -0.16
LIMS1-202ENST00000338045 GRK5P34947 590 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 SOX3P41225 446 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 RANBP1P43487 201 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 DLX5P56178 289 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 QPRTQ15274 297 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 TMEM81Q6P7N7 255 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 TMPRSS12Q86WS5 348 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 OR13F1Q8NGS4 319 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 FAR1Q8WVX9 515 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 ZNF582Q96NG8 517 aaPredicted RBP14.08□□□□□ -0.16
LIMS1-202ENST00000338045 GALNT9Q9HCQ5 603 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 OSGIN1Q9UJX0 560 aa14.08□□□□□ -0.16
LIMS1-202ENST00000338045 ANKUB1A6NFN9 424 aa14.07□□□□□ -0.16
LIMS1-202ENST00000338045 H3BSA7 217 aa14.07□□□□□ -0.16
LIMS1-202ENST00000338045 OR7A10O76100 309 aa14.07□□□□□ -0.16
LIMS1-202ENST00000338045 NUDT14O95848 222 aa14.07□□□□□ -0.16
LIMS1-202ENST00000338045 GP1BBP13224 206 aa14.07□□□□□ -0.16
LIMS1-202ENST00000338045 ACVR2AP27037 513 aa14.07□□□□□ -0.16
LIMS1-202ENST00000338045 C21orf33P30042 268 aaPredicted RBP14.07□□□□□ -0.16
LIMS1-202ENST00000338045 DLSTP36957 453 aa14.07□□□□□ -0.16
LIMS1-202ENST00000338045 ST3GAL4Q11206 333 aa14.07□□□□□ -0.16
LIMS1-202ENST00000338045 CHAF1BQ13112 559 aa14.07□□□□□ -0.16
LIMS1-202ENST00000338045 TUBA3CQ13748 450 aa14.07□□□□□ -0.16
LIMS1-202ENST00000338045 OPN5Q6U736 354 aa14.07□□□□□ -0.16
LIMS1-202ENST00000338045 RTL4Q6ZR62 310 aa14.07□□□□□ -0.16
LIMS1-202ENST00000338045 BCDIN3DQ7Z5W3 292 aaKnown RBP14.07□□□□□ -0.16
LIMS1-202ENST00000338045 OR51A7Q8NH64 312 aa14.07□□□□□ -0.16
LIMS1-202ENST00000338045 ZFAND2BQ8WV99 257 aa14.07□□□□□ -0.16
LIMS1-202ENST00000338045 TNFRSF13CQ96RJ3 184 aa14.07□□□□□ -0.16
LIMS1-202ENST00000338045 LHPPQ9H008 270 aa14.07□□□□□ -0.16
LIMS1-202ENST00000338045 ACOT13Q9NPJ3 140 aa14.07□□□□□ -0.16
LIMS1-202ENST00000338045 TAS2R10Q9NYW0 307 aa14.07□□□□□ -0.16
LIMS1-202ENST00000338045 FBXL4Q9UKA2 621 aa14.07□□□□□ -0.16
LIMS1-202ENST00000338045 RPL36Q9Y3U8 105 aaKnown RBP14.07□□□□□ -0.16
LIMS1-202ENST00000338045 KDM4EB2RXH2 506 aaPredicted RBP14.06□□□□□ -0.16
LIMS1-202ENST00000338045 STMND1H3BQB6 276 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 GMFGO60234 142 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 CH25HO95992 272 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 STSP08842 583 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 DBTP11182 482 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms