RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 ZNF542PQ5EBM4 170 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 FAM78AQ5JUQ0 283 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.47□□□□□ -0.57
FN1-202ENST00000336916 SGCZQ96LD1 299 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 PRDM9Q9NQV7 894 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 FOXO6A8MYZ6 492 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 GAPDHSO14556 408 aaPredicted RBP11.47□□□□□ -0.57
FN1-202ENST00000336916 TIMM8AO60220 97 aaPredicted RBP11.47□□□□□ -0.57
FN1-202ENST00000336916 OR8U9P0C7N5 309 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 GLB1P16278 677 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 CYB561P49447 251 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 ANKRD54Q6NXT1 300 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 CRYGNQ8WXF5 182 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 FBXL20Q96IG2 436 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 OR6C1Q96RD1 312 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 FAM117AQ9C073 453 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 ETV7Q9Y603 341 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 K7ERQ8 282 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 DPM1O60762 260 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 CNOT4O95628 575 aaKnown RBP11.47□□□□□ -0.57
FN1-202ENST00000336916 OPRD1P41143 372 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 AARDQ4LEZ3 155 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 CMPK2Q5EBM0 449 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 C3orf38Q5JPI3 329 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 PDZD9Q8IXQ8 264 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 IL17FQ96PD4 163 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 CMSS1Q9BQ75 279 aaKnown RBP11.47□□□□□ -0.57
FN1-202ENST00000336916 TM7SF3Q9NS93 570 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 TCN2P20062 427 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 LSSP48449 732 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 CAMLGP49069 296 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 FAM109AQ8N4B1 249 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 INTS12Q96CB8 462 aaKnown RBP11.47□□□□□ -0.57
FN1-202ENST00000336916 SAMD8Q96LT4 415 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 TREX1Q9NSU2 369 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 RPH3AQ9Y2J0 694 aaPredicted RBP11.47□□□□□ -0.57
FN1-202ENST00000336916 CD27P26842 260 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 BMXP51813 675 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 FAM180BQ6P0A1 224 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 ZNF322Q6U7Q0 402 aaPredicted RBP11.47□□□□□ -0.57
FN1-202ENST00000336916 PLEKHO2Q8TD55 490 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 SLC25A44Q96H78 314 aaPredicted RBP11.47□□□□□ -0.57
FN1-202ENST00000336916 THSD1Q9NS62 852 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 PLEKHM1Q9Y4G2 1056 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 PLATP00750 562 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 RPS17P08708 135 aaKnown RBP11.47□□□□□ -0.57
FN1-202ENST00000336916 TPT1P13693 172 aaKnown RBP11.47□□□□□ -0.57
FN1-202ENST00000336916 KIAA1024LP59773 190 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 RPS26P62854 115 aaKnown RBP11.47□□□□□ -0.57
FN1-202ENST00000336916 SIM1P81133 766 aaPredicted RBP11.47□□□□□ -0.57
FN1-202ENST00000336916 TDHQ8IZJ6 230 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 ADAMTS14Q8WXS8 1223 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 NMNAT1Q9HAN9 279 aaPredicted RBP11.47□□□□□ -0.57
FN1-202ENST00000336916 PMS2P1A4D2B8 440 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 SNAP29O95721 258 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 GJA4P35212 333 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 PTH2RP49190 550 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 PAAF1Q9BRP4 392 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 IGSF5Q9NSI5 407 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 RAB5BP61020 215 aa11.46□□□□□ -0.57
FN1-202ENST00000336916 ZNF616Q08AN1 781 aa11.46□□□□□ -0.57
FN1-202ENST00000336916 GPR18Q14330 331 aa11.46□□□□□ -0.57
FN1-202ENST00000336916 TBRG1Q3YBR2 411 aa11.46□□□□□ -0.57
FN1-202ENST00000336916 NLRP8Q86W28 1048 aa11.46□□□□□ -0.57
FN1-202ENST00000336916 CPNE5Q9HCH3 593 aa11.46□□□□□ -0.57
FN1-202ENST00000336916 CARD8Q9Y2G2 431 aa11.46□□□□□ -0.57
FN1-202ENST00000336916 CADP27708 2225 aa11.46□□□□□ -0.57
FN1-202ENST00000336916 CXorf51AA0A1B0GTR3 108 aa11.46□□□□□ -0.57
FN1-202ENST00000336916 A0A1B0GX78 115 aa11.46□□□□□ -0.57
FN1-202ENST00000336916 TARM1B6A8C7 271 aa11.46□□□□□ -0.57
FN1-202ENST00000336916 MCRIP1C9JLW8 97 aa11.46□□□□□ -0.57
FN1-202ENST00000336916 AP1G1O43747 822 aa11.46□□□□□ -0.57
FN1-202ENST00000336916 PCGF3Q3KNV8 242 aa11.46□□□□□ -0.57
FN1-202ENST00000336916 SLC16A14Q7RTX9 510 aa11.46□□□□□ -0.57
FN1-202ENST00000336916 EID2Q8N6I1 236 aa11.46□□□□□ -0.57
FN1-202ENST00000336916 KLHDC9Q8NEP7 349 aa11.46□□□□□ -0.57
FN1-202ENST00000336916 ZNF300Q96RE9 604 aaPredicted RBP11.46□□□□□ -0.57
FN1-202ENST00000336916 TWSG1Q9GZX9 223 aa11.46□□□□□ -0.57
FN1-202ENST00000336916 HCFC1R1Q9NWW0 138 aa11.46□□□□□ -0.57
FN1-202ENST00000336916 TMEM181Q9P2C4 612 aa11.46□□□□□ -0.57
FN1-202ENST00000336916 ZNF281Q9Y2X9 895 aa11.46□□□□□ -0.57
FN1-202ENST00000336916 ZNF705EA8MWA4 302 aaPredicted RBP11.46□□□□□ -0.57
FN1-202ENST00000336916 KITLGP21583 273 aa11.46□□□□□ -0.57
FN1-202ENST00000336916 ELK4P28324 431 aa11.46□□□□□ -0.57
FN1-202ENST00000336916 VEGFCP49767 419 aa11.46□□□□□ -0.57
FN1-202ENST00000336916 USF2Q15853 346 aaPredicted RBP11.46□□□□□ -0.57
FN1-202ENST00000336916 SLC22A6Q4U2R8 563 aa11.46□□□□□ -0.57
FN1-202ENST00000336916 OR52R1Q8NGF1 315 aa11.46□□□□□ -0.57
FN1-202ENST00000336916 OR56B1Q8NGI3 324 aa11.46□□□□□ -0.57
FN1-202ENST00000336916 ZNF681Q96N22 645 aa11.46□□□□□ -0.57
FN1-202ENST00000336916 UHRF1Q96T88 793 aaPredicted RBP11.46□□□□□ -0.57
FN1-202ENST00000336916 TSNAXQ99598 290 aaKnown RBP11.46□□□□□ -0.57
FN1-202ENST00000336916 SLC46A2Q9BY10 475 aa11.46□□□□□ -0.57
FN1-202ENST00000336916 CD300LBA8K4G0 201 aa11.46□□□□□ -0.58
FN1-202ENST00000336916 F6UZH7 168 aa11.46□□□□□ -0.58
FN1-202ENST00000336916 ARNTLO00327 626 aa11.46□□□□□ -0.58
FN1-202ENST00000336916 GAAP10253 952 aa11.46□□□□□ -0.58
FN1-202ENST00000336916 GGT5P36269 586 aa11.46□□□□□ -0.58
FN1-202ENST00000336916 FGFBP1Q14512 234 aa11.46□□□□□ -0.58
FN1-202ENST00000336916 TSSK4Q6SA08 328 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms