RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 CYP4Z1Q86W10 505 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 ATCAYQ86WG3 371 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 PM20D2Q8IYS1 436 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 MEIOBQ8N635 442 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 GALNT11Q8NCW6 608 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 ELOA3Q8NG57 546 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 FAM57AQ8TBR7 257 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 SLC25A43Q8WUT9 341 aaPredicted RBP12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 SLC41A3Q96GZ6 507 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 PRRC1Q96M27 445 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 ZNF300Q96RE9 604 aaPredicted RBP12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 PRDM14Q9GZV8 571 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 MAGIXQ9H6Y5 334 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 C12orf10Q9HB07 376 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 ALKBH4Q9NXW9 302 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 NDUFAF4Q9P032 175 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 RHCGQ9UBD6 479 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 SLC7A7Q9UM01 511 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 A4GNTQ9UNA3 340 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 FAM32AQ9Y421 112 aaKnown RBP12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 ENPP4Q9Y6X5 453 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 DNAJC13O75165 2243 aa12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 PRRC2CQ9Y520 2896 aaKnown RBP12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 MED12Q93074 2177 aa12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 SVILO95425 2214 aa12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 CHD6Q8TD26 2715 aa12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 A0A0J9YW62 118 aa12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 TCRBV3S1A0A5B6 114 aa12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 DHRS12A0PJE2 317 aa12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 GJE1A6NN92 205 aa12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 H0Y3Z8 333 aa12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 H0YC42 278 aa12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 EIF1AYO14602 144 aaKnown RBP12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 PRRG2O14669 202 aa12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 CHP2O43745 196 aa12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 DIRAS1O95057 198 aa12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 LYPD3O95274 346 aa12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 FABP3P05413 133 aa12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 TFPIP10646 304 aa12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 UMPSP11172 480 aa12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 ITGA2P17301 1181 aa12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 IFNA8P32881 189 aa12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 TPD52P55327 224 aaPredicted RBP12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 CLDN15P56746 228 aa12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 CHRNB3Q05901 458 aa12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 SYT14P1Q58G82 188 aa12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 SWT1Q5T5J6 900 aaKnown RBP12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 ZNF585AQ6P3V2 769 aa12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 Q6ZPB1 254 aaPredicted RBP12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 ZNF605Q86T29 641 aa12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 ZDHHC21Q8IVQ6 265 aa12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 ADGRG5Q8IZF4 528 aa12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 SLC38A4Q969I6 547 aa12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 DDIT4LQ96D03 193 aa12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 RSRC1Q96IZ7 334 aaKnown RBP12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 KLHL15Q96M94 604 aa12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 FNDC11Q9BVV2 318 aa12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 OR11A1Q9GZK7 315 aa12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 IL1RAPQ9NPH3 570 aa12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 OSGIN2Q9Y236 505 aa12.68□□□□□ -0.38
APOBEC3B-202ENST00000335760 A0A087WUJ7 227 aa12.67□□□□□ -0.38
APOBEC3B-202ENST00000335760 A0A1W2PNR3 127 aa12.67□□□□□ -0.38
APOBEC3B-202ENST00000335760 A8MVM7 634 aa12.67□□□□□ -0.38
APOBEC3B-202ENST00000335760 TNFSF11O14788 317 aa12.67□□□□□ -0.38
APOBEC3B-202ENST00000335760 FFAR1O14842 300 aa12.67□□□□□ -0.38
APOBEC3B-202ENST00000335760 ZNF208O43345 1280 aa12.67□□□□□ -0.38
APOBEC3B-202ENST00000335760 GPIP06744 558 aa12.67□□□□□ -0.38
APOBEC3B-202ENST00000335760 RHCEP18577 417 aa12.67□□□□□ -0.38
APOBEC3B-202ENST00000335760 PTNP21246 168 aa12.67□□□□□ -0.38
APOBEC3B-202ENST00000335760 GNLYP22749 145 aa12.67□□□□□ -0.38
APOBEC3B-202ENST00000335760 FKBP2P26885 142 aaKnown RBP12.67□□□□□ -0.38
APOBEC3B-202ENST00000335760 SLC7A1P30825 629 aa12.67□□□□□ -0.38
APOBEC3B-202ENST00000335760 MAP2K6P52564 334 aa12.67□□□□□ -0.38
APOBEC3B-202ENST00000335760 ST3GAL3Q11203 375 aa12.67□□□□□ -0.38
APOBEC3B-202ENST00000335760 CCNIQ14094 377 aa12.67□□□□□ -0.38
APOBEC3B-202ENST00000335760 CTU2Q2VPK5 515 aaKnown RBP12.67□□□□□ -0.38
APOBEC3B-202ENST00000335760 IQCCQ4KMZ1 466 aa12.67□□□□□ -0.38
APOBEC3B-202ENST00000335760 EMC4Q5J8M3 183 aa12.67□□□□□ -0.38
APOBEC3B-202ENST00000335760 CHMP1BQ7LBR1 199 aa12.67□□□□□ -0.38
APOBEC3B-202ENST00000335760 DOLPP1Q86YN1 238 aa12.67□□□□□ -0.38
APOBEC3B-202ENST00000335760 OR2V1Q8NHB1 315 aa12.67□□□□□ -0.38
APOBEC3B-202ENST00000335760 CANT1Q8WVQ1 401 aa12.67□□□□□ -0.38
APOBEC3B-202ENST00000335760 DNAJA3Q96EY1 480 aa12.67□□□□□ -0.38
APOBEC3B-202ENST00000335760 OR5B2Q96R09 309 aa12.67□□□□□ -0.38
APOBEC3B-202ENST00000335760 SH3BGRL2Q9UJC5 107 aa12.67□□□□□ -0.38
APOBEC3B-202ENST00000335760 AURKCQ9UQB9 309 aa12.67□□□□□ -0.38
APOBEC3B-202ENST00000335760 TRGV8A0A0C4DH27 118 aa12.66□□□□□ -0.38
APOBEC3B-202ENST00000335760 ZC3H12DA2A288 527 aaKnown RBP12.66□□□□□ -0.38
APOBEC3B-202ENST00000335760 AHRRA9YTQ3 701 aa12.66□□□□□ -0.38
APOBEC3B-202ENST00000335760 ANKRD65E5RJM6 399 aa12.66□□□□□ -0.38
APOBEC3B-202ENST00000335760 MT-ND1P03886 318 aa12.66□□□□□ -0.38
APOBEC3B-202ENST00000335760 RAP2AP10114 183 aa12.66□□□□□ -0.38
APOBEC3B-202ENST00000335760 THRBP10828 461 aa12.66□□□□□ -0.38
APOBEC3B-202ENST00000335760 EIF1AXP47813 144 aaKnown RBP12.66□□□□□ -0.38
APOBEC3B-202ENST00000335760 UQCRFS1P47985 274 aa12.66□□□□□ -0.38
APOBEC3B-202ENST00000335760 CLK1P49759 484 aaKnown RBP12.66□□□□□ -0.38
APOBEC3B-202ENST00000335760 CASP6P55212 293 aa12.66□□□□□ -0.38
APOBEC3B-202ENST00000335760 RPS3AP61247 264 aaKnown RBP12.66□□□□□ -0.38
APOBEC3B-202ENST00000335760 GTF3C1Q12789 2109 aa12.66□□□□□ -0.38
APOBEC3B-202ENST00000335760 PDSS1Q5T2R2 415 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms