RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 LRIF1Q5T3J3 769 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 NAPEPLDQ6IQ20 393 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 CD300LGQ6UXG3 332 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 TMPRSS7Q7RTY8 843 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 PRICKLE2Q7Z3G6 844 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 PTOV1Q86YD1 416 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 LMNTD1Q8N9Z9 388 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 TMEM161BQ8NDZ6 487 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 NEIL3Q8TAT5 605 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 PROKR1Q8TCW9 393 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 RNASEH2CQ8TDP1 164 aaKnown RBP8.01□□□□□ -1.13
TDP1-201ENST00000335725 PAQR8Q8TEZ7 354 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 PCYT2Q99447 389 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 OR10A4Q9H209 315 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 LMAN1LQ9HAT1 526 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 TMEM27Q9HBJ8 222 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 NOX3Q9HBY0 568 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 SERGEFQ9UGK8 458 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 ASF1AQ9Y294 204 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 CAMTA1Q9Y6Y1 1673 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 C7orf77A4D0Y5 90 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 ZNF724A8MTY0 619 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 TISP43B9A030 160 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 RNASEK-C17orf49H0YIS7 233 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 DVL2O14641 736 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 PRRG1O14668 218 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 MAGEB4O15481 346 aaPredicted RBP8.01□□□□□ -1.13
TDP1-201ENST00000335725 UBL3O95164 117 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 GDF11O95390 407 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 MT-ND4P03905 459 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 SFTPBP07988 381 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 SNRNP70P08621 437 aaKnown RBP8.01□□□□□ -1.13
TDP1-201ENST00000335725 UCHL1P09936 223 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 NOVA1P51513 510 aaKnown RBP8.01□□□□□ -1.13
TDP1-201ENST00000335725 SLC10A7Q0GE19 358 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 PLEKHN1Q494U1 663 aaPredicted RBP8.01□□□□□ -1.13
TDP1-201ENST00000335725 FDX2Q6P4F2 183 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 FIGNL1Q6PIW4 674 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 GALNT14Q96FL9 552 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 NECAB3Q96P71 396 aaPredicted RBP8.01□□□□□ -1.13
TDP1-201ENST00000335725 FAIM2Q9BWQ8 316 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 GLIS2Q9BZE0 524 aaPredicted RBP8.01□□□□□ -1.13
TDP1-201ENST00000335725 ATXN3LQ9H3M9 355 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 FOXJ2Q9P0K8 574 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 ST3GAL5Q9UNP4 418 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 SLC7A11Q9UPY5 501 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 FLVCR1Q9Y5Y0 555 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 IRGMA1A4Y4 181 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 A6NNC1 897 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 SLC2A5P22732 501 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 SLC11A2P49281 568 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 FGF8P55075 233 aaPredicted RBP8.01□□□□□ -1.13
TDP1-201ENST00000335725 OR10A3P58181 314 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 SIM1P81133 766 aaPredicted RBP8.01□□□□□ -1.13
TDP1-201ENST00000335725 EOGTQ5NDL2 527 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 COL5A1-AS1Q5SY13 56 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 RPS27LQ71UM5 84 aaKnown RBP8.01□□□□□ -1.13
TDP1-201ENST00000335725 C5orf24Q7Z6I8 188 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 FAM98AQ8NCA5 519 aaKnown RBP8.01□□□□□ -1.13
TDP1-201ENST00000335725 CCNYQ8ND76 341 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 OR52B6Q8NGF0 335 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 OR5L2Q8NGL0 311 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 OR1J1Q8NGS3 322 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 CDS1Q92903 461 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 ARSGQ96EG1 525 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 HSD17B14Q9BPX1 270 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 ALKBH7Q9BT30 221 aaPredicted RBP8.01□□□□□ -1.13
TDP1-201ENST00000335725 COLEC11Q9BWP8 271 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 DPH1Q9BZG8 443 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 NRSN2Q9GZP1 204 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 WWTR1Q9GZV5 400 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 RGCCQ9H4X1 137 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 ZBTB3Q9H5J0 574 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 RHOFQ9HBH0 211 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 SPDYE2BA6NHP3 402 aa8□□□□□ -1.13
TDP1-201ENST00000335725 ELOA3DA6NLF2 546 aaPredicted RBP8□□□□□ -1.13
TDP1-201ENST00000335725 ARPC1BO15143 372 aaKnown RBP8□□□□□ -1.13
TDP1-201ENST00000335725 GLCEO94923 617 aa8□□□□□ -1.13
TDP1-201ENST00000335725 IGHEP01854 428 aa8□□□□□ -1.13
TDP1-201ENST00000335725 RPN2P04844 631 aa8□□□□□ -1.13
TDP1-201ENST00000335725 SPDYE6P0CI01 402 aa8□□□□□ -1.13
TDP1-201ENST00000335725 GIPRP48546 466 aa8□□□□□ -1.13
TDP1-201ENST00000335725 CAV2P51636 162 aa8□□□□□ -1.13
TDP1-201ENST00000335725 AFF3P51826 1226 aaKnown RBP8□□□□□ -1.13
TDP1-201ENST00000335725 HTD2P86397 168 aa8□□□□□ -1.13
TDP1-201ENST00000335725 HGFACQ04756 655 aa8□□□□□ -1.13
TDP1-201ENST00000335725 ABHD18Q0P651 414 aa8□□□□□ -1.13
TDP1-201ENST00000335725 HERPUD1Q15011 391 aa8□□□□□ -1.13
TDP1-201ENST00000335725 SPDYE2Q495Y8 402 aa8□□□□□ -1.13
TDP1-201ENST00000335725 ATAT1Q5SQI0 421 aa8□□□□□ -1.13
TDP1-201ENST00000335725 XYLT1Q86Y38 959 aa8□□□□□ -1.13
TDP1-201ENST00000335725 OR10G2Q8NGC3 310 aa8□□□□□ -1.13
TDP1-201ENST00000335725 RXFP2Q8WXD0 754 aa8□□□□□ -1.13
TDP1-201ENST00000335725 OR1E3Q8WZA6 343 aa8□□□□□ -1.13
TDP1-201ENST00000335725 P2RY11Q96G91 374 aa8□□□□□ -1.13
TDP1-201ENST00000335725 DIRC2Q96SL1 478 aa8□□□□□ -1.13
TDP1-201ENST00000335725 AARSD1Q9BTE6 412 aaKnown RBP8□□□□□ -1.13
TDP1-201ENST00000335725 GREM2Q9H772 168 aa8□□□□□ -1.13
TDP1-201ENST00000335725 MSL2Q9HCI7 577 aa8□□□□□ -1.13
TDP1-201ENST00000335725 HAO2Q9NYQ3 351 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms