RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 TMEM235A6NFC5 223 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 UBE2MP61081 183 aaKnown RBP5.18□□□□□ -1.58
PTPRB-202ENST00000334414 ACSM1Q08AH1 577 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 EEF1DP3Q658K8 133 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 DEFB128Q7Z7B8 93 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 CPNE8Q86YQ8 564 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 ZNF439Q8NDP4 499 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 OR8J2Q8NGG1 315 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 OR52E2Q8NGJ4 325 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 APOBEC3GQ9HC16 384 aaKnown RBP5.18□□□□□ -1.58
PTPRB-202ENST00000334414 HIDE1A8MVS5 230 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 FAM155AB1AL88 458 aaPredicted RBP5.18□□□□□ -1.58
PTPRB-202ENST00000334414 SOX15O60248 233 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 HBA1P69905 142 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 RNLSQ5VYX0 342 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 ANKRD16Q6P6B7 361 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 MAP6Q96JE9 813 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 SLC12A9Q9BXP2 914 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 FGFBP2Q9BYJ0 223 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 RHCGQ9UBD6 479 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 ACAD8Q9UKU7 415 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 LAMP3Q9UQV4 416 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 LAMB1P07942 1786 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 PQBP1O60828 265 aaKnown RBP5.18□□□□□ -1.58
PTPRB-202ENST00000334414 HPNP05981 417 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 DPEP1P16444 411 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 OR1D2P34982 312 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 CCR9P51686 369 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 MGAT3Q09327 533 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 WBP2NLQ6ICG8 309 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 SLC22A24Q8N4F4 322 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 PRTFDC1Q9NRG1 225 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 SLC7A7Q9UM01 511 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 PUS1Q9Y606 427 aaKnown RBP eCLIP5.18□□□□□ -1.58
PTPRB-202ENST00000334414 BCL2L11O43521 198 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 CAPNS1P04632 268 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 HABP2Q14520 560 aaPredicted RBP5.18□□□□□ -1.58
PTPRB-202ENST00000334414 STK11Q15831 433 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 ZNF791Q3KP31 576 aaPredicted RBP5.18□□□□□ -1.58
PTPRB-202ENST00000334414 FBXO48Q5FWF7 155 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 NPRL2Q8WTW4 380 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 AMDHD1Q96NU7 426 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 CDCA4Q9BXL8 241 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 ASIC5Q9NY37 505 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 PSAT1Q9Y617 370 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 NUMBLQ9Y6R0 609 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 I6L893 689 aaPredicted RBP5.18□□□□□ -1.58
PTPRB-202ENST00000334414 JUNDP17535 347 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 FBLP22087 321 aaKnown RBP5.18□□□□□ -1.58
PTPRB-202ENST00000334414 HOXA1P49639 335 aaPredicted RBP5.18□□□□□ -1.58
PTPRB-202ENST00000334414 RAG2P55895 527 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 NDUFA6P56556 154 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 DLK1P80370 383 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 KIAA0895LQ68EN5 471 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 FBXW12Q6X9E4 464 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 TECPR1Q7Z6L1 1165 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 ADGRG3Q86Y34 549 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 PRSS35Q8N3Z0 413 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 NETO2Q8NC67 525 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 OR6K3Q8NGY3 331 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 ACKR4Q9NPB9 350 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 UNCXA6NJT0 531 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 AGPAT2O15120 278 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 DUSP1P28562 367 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 SCAND1P57086 179 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 ELOCQ15369 112 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 GUK1Q16774 197 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 VITQ6UXI7 678 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 RHOUQ7L0Q8 258 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 C4orf36Q96KX1 117 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 INPP5KQ9BT40 448 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 CUTCQ9NTM9 273 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 OR5H14A6NHG9 310 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 M0R143 59 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 NUPL2O15504 423 aaKnown RBP5.18□□□□□ -1.58
PTPRB-202ENST00000334414 ZNF728P0DKX0 622 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 BPIFB3P59826 476 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 RNF4P78317 190 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 PDGFRLQ15198 375 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 ADIRFQ15847 76 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 TMEM97Q5BJF2 176 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 DACT2Q5SW24 774 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 KDM4DQ6B0I6 523 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 LRFN4Q6PJG9 635 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 SLC35D2Q76EJ3 337 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 MISPQ8IVT2 679 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 CBARPQ8N350 705 aaPredicted RBP5.18□□□□□ -1.58
PTPRB-202ENST00000334414 TMEM156Q8N614 296 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 OR1J1Q8NGS3 322 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 GPX8Q8TED1 209 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 SLC6A18Q96N87 628 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 GCM1Q9NP62 436 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 EHFQ9NZC4 300 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 YJEFN3A6XGL0 299 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 ACTL6BO94805 426 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 ITGB2P05107 769 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 CTXN2P0C2S0 81 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 OR2T7P0C7T2 308 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 CD52P31358 61 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 CAMK2BQ13554 666 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms