RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 POM121CA8CG34 1229 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 CTSVO60911 334 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 CEBPGP53567 150 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 CSRP2Q16527 193 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 C6orf15Q6UXA7 325 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-201ENST00000334136 MSANTD1Q6ZTZ1 278 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 NRMQ8IXM6 262 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 ARMC10Q8N2F6 343 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 ZNF527Q8NB42 609 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 GALNT11Q8NCW6 608 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 OR4F15Q8NGB8 312 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 OR9A2Q8NGT5 310 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 GNPDA2Q8TDQ7 276 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 DNAJA4Q8WW22 397 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-201ENST00000334136 B3GNT4Q9C0J1 378 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 GALNT9Q9HCQ5 603 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 BLACEA4D250 179 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 H7C2Y5 167 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 ZNF432O94892 652 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 GNALP38405 381 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 EIF3IQ13347 325 aaKnown RBP10.94□□□□□ -0.66
HDAC6-201ENST00000334136 COX20Q5RI15 118 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 PRAMEF17Q5VTA0 474 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 OGFOD3Q6PK18 319 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 LRRN1Q6UXK5 716 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 PEG10Q86TG7 708 aaKnown RBP10.94□□□□□ -0.66
HDAC6-201ENST00000334136 PLCZ1Q86YW0 608 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 SLC7A6Q92536 515 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 S100A16Q96FQ6 103 aaKnown RBP10.94□□□□□ -0.66
HDAC6-201ENST00000334136 THAP7Q9BT49 309 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-201ENST00000334136 SAP130Q9H0E3 1048 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 SAV1Q9H4B6 383 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-201ENST00000334136 KLRF1Q9NZS2 232 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 NDUFAF4Q9P032 175 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 ERVK-19Q9WJR5 959 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 MED31Q9Y3C7 131 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 PCDHGB2Q9Y5G2 931 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 WASHC1A8K0Z3 465 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 D6RAR5 112 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 MCIDASD6RGH6 385 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 SCDO00767 359 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 XKRYO14609 159 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 NSA2O95478 260 aaKnown RBP10.94□□□□□ -0.66
HDAC6-201ENST00000334136 TFPIP10646 304 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 GIFP27352 417 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 GRPRP30550 384 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 ARFIP1P53367 373 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 CCDC58Q4VC31 144 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 FCRLBQ6BAA4 426 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 SERPINA12Q8IW75 414 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 FOXRED2Q8IWF2 684 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 PROKR2Q8NFJ6 384 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 WDR20Q8TBZ3 569 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 ZNF471Q9BX82 626 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-201ENST00000334136 METTL7AQ9H8H3 244 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 UCK1Q9HA47 277 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 TREM1Q9NP99 234 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 CNOT2Q9NZN8 540 aaKnown RBP10.94□□□□□ -0.66
HDAC6-201ENST00000334136 BDP1A6H8Y1 2624 aa10.94□□□□□ -0.66
HDAC6-201ENST00000334136 KANTRA0A1W2PQU2 76 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 ASPDHA6ND91 283 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 ARPC5O15511 151 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 ITGA10O75578 1167 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 CPMP14384 443 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 MC3RP41968 323 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 OR3A3P47888 321 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 GIPRP48546 466 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 SCRN3Q0VDG4 424 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 FAPQ12884 760 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 FAM53BQ14153 422 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 EFR3AQ14156 821 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 RAB12Q6IQ22 244 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 SPAG16Q8N0X2 631 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 CARFQ8N187 725 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 ANKRD53Q8N9V6 530 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 OR52E4Q8NGH9 312 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 TRMT10AQ8TBZ6 339 aaKnown RBP10.93□□□□□ -0.66
HDAC6-201ENST00000334136 TM4SF18Q96CE8 201 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 MVB12AQ96EY5 273 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 COL25A1Q9BXS0 654 aaPredicted RBP10.93□□□□□ -0.66
HDAC6-201ENST00000334136 NDRG4Q9ULP0 352 aaKnown RBP10.93□□□□□ -0.66
HDAC6-201ENST00000334136 DAPP1Q9UN19 280 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 FARSAQ9Y285 508 aaKnown RBP10.93□□□□□ -0.66
HDAC6-201ENST00000334136 PLEKHA6Q9Y2H5 1048 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 NOP16Q9Y3C1 178 aaKnown RBP10.93□□□□□ -0.66
HDAC6-201ENST00000334136 NSG1A0A0A6YYJ2 146 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 FABP7O15540 132 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 GALR3O60755 368 aaPredicted RBP10.93□□□□□ -0.66
HDAC6-201ENST00000334136 HOXB3P14651 431 aaPredicted RBP10.93□□□□□ -0.66
HDAC6-201ENST00000334136 FOLR1P15328 257 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 CTBP2P56545 445 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 ELP2Q6IA86 826 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 USP51Q70EK9 711 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 ESX1Q8N693 406 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 BOLLQ8N9W6 283 aaKnown RBP10.93□□□□□ -0.66
HDAC6-201ENST00000334136 DCBLD2Q96PD2 775 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 COMMD4Q9H0A8 199 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.93□□□□□ -0.66
HDAC6-201ENST00000334136 C14orf105Q9NVL8 296 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 BLOC1S5-TXNDC5H3BN57 136 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms