RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 ZNF684Q5T5D7 378 aa15.4■□□□□ 0.06
PTCH1-201ENST00000331920 NIPSNAP3BQ9BS92 247 aa15.4■□□□□ 0.06
PTCH1-201ENST00000331920 A0A087WZY1 265 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 OR6C76A6NM76 312 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 WNT4P56705 351 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 DEFB133Q30KQ1 61 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 FAM69AQ5T7M9 428 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 ETFRF1Q6IPR1 90 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 KLRG1Q96E93 195 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 HOXD1Q9GZZ0 328 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 MITFO75030 526 aaPredicted RBP15.39■□□□□ 0.05
PTCH1-201ENST00000331920 IMPA1P29218 277 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 CSN1S1P47710 185 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 MTCP1P56278 107 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 TAS2R46P59540 309 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 ZNF486Q96H40 463 aaPredicted RBP15.39■□□□□ 0.05
PTCH1-201ENST00000331920 PCDHA9Q9Y5H5 950 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 PMP2P02689 132 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 TBPP20226 339 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 TMEM139Q8IV31 216 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 SLC35G3Q8N808 338 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 NIPA2Q8N8Q9 360 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 ZNF417Q8TAU3 575 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 THSD1Q9NS62 852 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 DUSP13Q9UII6 198 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 KCNK5O95279 499 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 LAP3P28838 519 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 UBE2G1P62253 170 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 AVPI1Q5T686 147 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 NGBQ9NPG2 151 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 TM7SF3Q9NS93 570 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 MCRIP1C9JLW8 97 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 FUT1P19526 365 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 ATP1B3P54709 279 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 DNAJB13P59910 316 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 RAC1P63000 192 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 SIRPAP78324 504 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 LMAN2Q12907 356 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 DCAF12L1Q5VU92 463 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 OR5K4A6NMS3 321 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 RIPPLY1Q0D2K3 151 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 DNAJC5GQ8N7S2 189 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 FRMD1Q8N878 549 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 ZNF689Q96CS4 500 aaPredicted RBP15.39■□□□□ 0.05
PTCH1-201ENST00000331920 SAP130Q9H0E3 1048 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 TMPRSS5Q9H3S3 457 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 ASCC3Q8N3C0 2202 aaKnown RBP15.39■□□□□ 0.05
PTCH1-201ENST00000331920 J3QR89 54 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 EEDO75530 441 aaKnown RBP15.39■□□□□ 0.05
PTCH1-201ENST00000331920 OPRL1P41146 370 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 AMTP48728 403 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 EMP2P54851 167 aa15.39■□□□□ 0.05
PTCH1-201ENST00000331920 METAP1DQ6UB28 335 aaPredicted RBP15.39■□□□□ 0.05
PTCH1-201ENST00000331920 NOCTQ9UK39 431 aaKnown RBP15.39■□□□□ 0.05
PTCH1-201ENST00000331920 MYO5BQ9ULV0 1848 aa15.38■□□□□ 0.05
PTCH1-201ENST00000331920 SLC22A23A1A5C7 686 aa15.38■□□□□ 0.05
PTCH1-201ENST00000331920 CIDEAO60543 219 aa15.38■□□□□ 0.05
PTCH1-201ENST00000331920 CHFRQ96EP1 664 aa15.38■□□□□ 0.05
PTCH1-201ENST00000331920 DZANK1Q9NVP4 752 aa15.38■□□□□ 0.05
PTCH1-201ENST00000331920 V9GY05 133 aa15.38■□□□□ 0.05
PTCH1-201ENST00000331920 DIP2AQ14689 1571 aa15.38■□□□□ 0.05
PTCH1-201ENST00000331920 COCHO43405 550 aa15.38■□□□□ 0.05
PTCH1-201ENST00000331920 PRAMEF4O60810 478 aa15.38■□□□□ 0.05
PTCH1-201ENST00000331920 NDUFB2O95178 105 aa15.38■□□□□ 0.05
PTCH1-201ENST00000331920 TMEM31Q5JXX7 168 aa15.38■□□□□ 0.05
PTCH1-201ENST00000331920 THNSL2Q86YJ6 484 aa15.38■□□□□ 0.05
PTCH1-201ENST00000331920 BPIFB2Q8N4F0 458 aa15.38■□□□□ 0.05
PTCH1-201ENST00000331920 PHF1O43189 567 aaPredicted RBP15.38■□□□□ 0.05
PTCH1-201ENST00000331920 GRPP07492 148 aa15.38■□□□□ 0.05
PTCH1-201ENST00000331920 HBQ1P09105 142 aa15.38■□□□□ 0.05
PTCH1-201ENST00000331920 ERV3-1Q14264 604 aa15.38■□□□□ 0.05
PTCH1-201ENST00000331920 NHSL2Q5HYW2 709 aa15.38■□□□□ 0.05
PTCH1-201ENST00000331920 ZNF551Q7Z340 670 aaPredicted RBP15.38■□□□□ 0.05
PTCH1-201ENST00000331920 SLC5A8Q8N695 610 aa15.38■□□□□ 0.05
PTCH1-201ENST00000331920 KDF1Q8NAX2 398 aaPredicted RBP15.38■□□□□ 0.05
PTCH1-201ENST00000331920 OR5D18Q8NGL1 313 aa15.38■□□□□ 0.05
PTCH1-201ENST00000331920 MCOLN1Q9GZU1 580 aa15.38■□□□□ 0.05
PTCH1-201ENST00000331920 SOWAHBA6NEL2 793 aa15.38■□□□□ 0.05
PTCH1-201ENST00000331920 ADAM10O14672 748 aa15.38■□□□□ 0.05
PTCH1-201ENST00000331920 UNGP13051 313 aaPredicted RBP15.38■□□□□ 0.05
PTCH1-201ENST00000331920 NFYAP23511 347 aaPredicted RBP15.38■□□□□ 0.05
PTCH1-201ENST00000331920 HTR1EP28566 365 aa15.38■□□□□ 0.05
PTCH1-201ENST00000331920 ZNF587Q96SQ5 575 aaPredicted RBP15.38■□□□□ 0.05
PTCH1-201ENST00000331920 CHRNA9Q9UGM1 479 aa15.38■□□□□ 0.05
PTCH1-201ENST00000331920 APBB3O95704 486 aa15.38■□□□□ 0.05
PTCH1-201ENST00000331920 CDK4P11802 303 aa15.38■□□□□ 0.05
PTCH1-201ENST00000331920 RAB33AQ14088 237 aa15.38■□□□□ 0.05
PTCH1-201ENST00000331920 BIRC8Q96P09 236 aa15.38■□□□□ 0.05
PTCH1-201ENST00000331920 C1orf167Q5SNV9 1468 aa15.38■□□□□ 0.05
PTCH1-201ENST00000331920 ADAMTS13Q76LX8 1427 aa15.38■□□□□ 0.05
PTCH1-201ENST00000331920 F2P00734 622 aa15.38■□□□□ 0.05
PTCH1-201ENST00000331920 HPRP00739 348 aa15.38■□□□□ 0.05
PTCH1-201ENST00000331920 HSF1Q00613 529 aa15.38■□□□□ 0.05
PTCH1-201ENST00000331920 CATR1Q13166 79 aa15.38■□□□□ 0.05
PTCH1-201ENST00000331920 TUSC1Q2TAM9 212 aa15.38■□□□□ 0.05
PTCH1-201ENST00000331920 CPEB2Q7Z5Q1 589 aaKnown RBP15.38■□□□□ 0.05
PTCH1-201ENST00000331920 C12orf76Q8N812 135 aaPredicted RBP15.38■□□□□ 0.05
PTCH1-201ENST00000331920 KAZALD1Q96I82 304 aa15.38■□□□□ 0.05
PTCH1-201ENST00000331920 RASD1Q9Y272 281 aa15.38■□□□□ 0.05
PTCH1-201ENST00000331920 TNFRSF10AO00220 468 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms