RNA–Protein interactions for RNA: ENST00000331366.9

CPNE8-201, Transcript of copine 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPNE8, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-201ENST00000331366 LDLRAD4O15165 306 aa8.09□□□□□ -1.11
CPNE8-201ENST00000331366 ZNF254O75437 659 aa8.09□□□□□ -1.11
CPNE8-201ENST00000331366 NDUFB6O95139 128 aa8.09□□□□□ -1.11
CPNE8-201ENST00000331366 IFNA16P05015 189 aa8.09□□□□□ -1.11
CPNE8-201ENST00000331366 TNNI3P19429 210 aa8.09□□□□□ -1.11
CPNE8-201ENST00000331366 RAB3BP20337 219 aa8.09□□□□□ -1.11
CPNE8-201ENST00000331366 SLC6A6P31641 620 aa8.09□□□□□ -1.11
CPNE8-201ENST00000331366 HTR2BP41595 481 aa8.09□□□□□ -1.11
CPNE8-201ENST00000331366 RAP2BP61225 183 aa8.09□□□□□ -1.11
CPNE8-201ENST00000331366 RPS21P63220 83 aaKnown RBP8.09□□□□□ -1.11
CPNE8-201ENST00000331366 PUDPQ08623 228 aa8.09□□□□□ -1.11
CPNE8-201ENST00000331366 FCRL6Q6DN72 434 aa8.09□□□□□ -1.11
CPNE8-201ENST00000331366 RTL4Q6ZR62 310 aa8.09□□□□□ -1.11
CPNE8-201ENST00000331366 GPR135Q8IZ08 494 aa8.09□□□□□ -1.11
CPNE8-201ENST00000331366 ZNF655Q8N720 491 aaPredicted RBP8.09□□□□□ -1.11
CPNE8-201ENST00000331366 SNAPC3Q92966 411 aa8.09□□□□□ -1.11
CPNE8-201ENST00000331366 MCHR2Q969V1 340 aa8.09□□□□□ -1.11
CPNE8-201ENST00000331366 PNPLA2Q96AD5 504 aa8.09□□□□□ -1.11
CPNE8-201ENST00000331366 MIB2Q96AX9 1013 aa8.09□□□□□ -1.11
CPNE8-201ENST00000331366 RBP7Q96R05 134 aa8.09□□□□□ -1.11
CPNE8-201ENST00000331366 CDCA3Q99618 268 aaPredicted RBP8.09□□□□□ -1.11
CPNE8-201ENST00000331366 SHARPINQ9H0F6 387 aa8.09□□□□□ -1.11
CPNE8-201ENST00000331366 ISG20L2Q9H9L3 353 aaKnown RBP8.09□□□□□ -1.11
CPNE8-201ENST00000331366 KNL1Q8NG31 2342 aa8.09□□□□□ -1.11
CPNE8-201ENST00000331366 UNC80Q8N2C7 3258 aa8.09□□□□□ -1.11
CPNE8-201ENST00000331366 ANTXRLA6NF34 631 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 URADA6NGE7 173 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 SRSF10O75494 262 aaKnown RBP8.08□□□□□ -1.12
CPNE8-201ENST00000331366 CXCL14O95715 111 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 IFNA7P01567 189 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 FGF2P09038 288 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 CTRB1P17538 263 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 SSR2P43308 183 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 CAPZA1P52907 286 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 UBE2IP63279 158 aaKnown RBP8.08□□□□□ -1.12
CPNE8-201ENST00000331366 SPDYE7PQ495Y7 208 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 DCST2Q5T1A1 773 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 C10orf91Q5T1B1 145 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 CTRB2Q6GPI1 263 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 CDC20BQ86Y33 519 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 NRMQ8IXM6 262 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 SLC38A6Q8IZM9 456 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 BBS1Q8NFJ9 593 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 CYB5D2Q8WUJ1 264 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 FERD3LQ96RJ6 166 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 CITED4Q96RK1 184 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 ZDHHC4Q9NPG8 344 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 PHPT1Q9NRX4 125 aaPredicted RBP8.08□□□□□ -1.12
CPNE8-201ENST00000331366 TSR3Q9UJK0 312 aaKnown RBP8.08□□□□□ -1.12
CPNE8-201ENST00000331366 COLEC10Q9Y6Z7 277 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 A0A087WUJ7 227 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 FITM1A5D6W6 292 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 SLC9B1P1A6NJY1 282 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 ACOD1A6NK06 481 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 SLC35E2P0CK97 266 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 XPAP23025 273 aaPredicted RBP8.08□□□□□ -1.12
CPNE8-201ENST00000331366 IL32P24001 234 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 TRIM60Q495X7 471 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 RGS7BPQ6MZT1 257 aaPredicted RBP8.08□□□□□ -1.12
CPNE8-201ENST00000331366 ANKRD54Q6NXT1 300 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 LRRN1Q6UXK5 716 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 TRMT11Q7Z4G4 463 aaKnown RBP8.08□□□□□ -1.12
CPNE8-201ENST00000331366 SLC35F3Q8IY50 421 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 NPEPL1Q8NDH3 523 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 OR11H4Q8NGC9 324 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 OR52L1Q8NGH7 329 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 SKA2Q8WVK7 121 aaPredicted RBP8.08□□□□□ -1.12
CPNE8-201ENST00000331366 SORCS1Q8WY21 1168 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 EXOSC8Q96B26 276 aaKnown RBP8.08□□□□□ -1.12
CPNE8-201ENST00000331366 NXPE2Q96DL1 559 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 PELI1Q96FA3 418 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 ZFYVE19Q96K21 471 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 DERL3Q96Q80 235 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 DZANK1Q9NVP4 752 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 FOXJ3Q9UPW0 622 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 ZNF780BQ9Y6R6 833 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 A0A1B0GTI1 187 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 C12orf71A8MTZ7 269 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 SOCS6O14544 535 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 OR1F1O43749 312 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 REM1O75628 298 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 CD74P04233 296 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 RPA2P15927 270 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 ZNF3P17036 446 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 ATF1P18846 271 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 ZNF10P21506 573 aaPredicted RBP8.08□□□□□ -1.12
CPNE8-201ENST00000331366 GSK3AP49840 483 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 MAP2K6P52564 334 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 RAB38P57729 211 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 LSM11P83369 360 aaKnown RBP eCLIP8.08□□□□□ -1.12
CPNE8-201ENST00000331366 MEF2AQ02078 507 aaPredicted RBP8.08□□□□□ -1.12
CPNE8-201ENST00000331366 DUSP5Q16690 384 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 BTBD16Q32M84 506 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 TOR2AQ5JU69 321 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 PHF19Q5T6S3 580 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 FBXO42Q6P3S6 717 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 PLEKHM3Q6ZWE6 761 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 ZNF550Q7Z398 422 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 CPOQ8IVL8 374 aa8.08□□□□□ -1.12
CPNE8-201ENST00000331366 OR4K14Q8NGD5 310 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms