RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 GOLGA8NF8WBI6 632 aa10.9□□□□□ -0.66
TPM3-204ENST00000323144 OVOL3O00110 214 aa10.9□□□□□ -0.66
TPM3-204ENST00000323144 SULT2B1O00204 365 aa10.9□□□□□ -0.66
TPM3-204ENST00000323144 IGHV4-39P01824 125 aa10.9□□□□□ -0.66
TPM3-204ENST00000323144 GSNP06396 782 aa10.9□□□□□ -0.66
TPM3-204ENST00000323144 LBPP18428 481 aa10.9□□□□□ -0.66
TPM3-204ENST00000323144 PTNP21246 168 aa10.9□□□□□ -0.66
TPM3-204ENST00000323144 RPS4Y1P22090 263 aaKnown RBP10.9□□□□□ -0.66
TPM3-204ENST00000323144 NTF4P34130 210 aa10.9□□□□□ -0.66
TPM3-204ENST00000323144 ACVR1BP36896 505 aa10.9□□□□□ -0.66
TPM3-204ENST00000323144 CLNS1AP54105 237 aaKnown RBP10.9□□□□□ -0.66
TPM3-204ENST00000323144 P2RY6Q15077 328 aa10.9□□□□□ -0.66
TPM3-204ENST00000323144 PPA1Q15181 289 aa10.9□□□□□ -0.66
TPM3-204ENST00000323144 TNFAIP8L3Q5GJ75 292 aa10.9□□□□□ -0.66
TPM3-204ENST00000323144 ATAD3BQ5T9A4 648 aa10.9□□□□□ -0.66
TPM3-204ENST00000323144 OGFOD2Q6N063 350 aa10.9□□□□□ -0.66
TPM3-204ENST00000323144 B3GLCTQ6Y288 498 aa10.9□□□□□ -0.66
TPM3-204ENST00000323144 TMPPEQ6ZT21 453 aa10.9□□□□□ -0.66
TPM3-204ENST00000323144 GRINAQ7Z429 371 aa10.9□□□□□ -0.66
TPM3-204ENST00000323144 TMEM234Q8WY98 164 aa10.9□□□□□ -0.66
TPM3-204ENST00000323144 PARD6BQ9BYG5 372 aa10.9□□□□□ -0.66
TPM3-204ENST00000323144 SAP130Q9H0E3 1048 aa10.9□□□□□ -0.66
TPM3-204ENST00000323144 ESRP2Q9H6T0 727 aaKnown RBP10.9□□□□□ -0.66
TPM3-204ENST00000323144 POLE3Q9NRF9 147 aa10.9□□□□□ -0.66
TPM3-204ENST00000323144 GDF2Q9UK05 429 aaPredicted RBP10.9□□□□□ -0.66
TPM3-204ENST00000323144 ADAM21Q9UKJ8 722 aa10.9□□□□□ -0.66
TPM3-204ENST00000323144 CADP27708 2225 aa10.89□□□□□ -0.67
TPM3-204ENST00000323144 TMEM72A0PK05 275 aa10.89□□□□□ -0.67
TPM3-204ENST00000323144 ZC3H12DA2A288 527 aaKnown RBP10.89□□□□□ -0.67
TPM3-204ENST00000323144 ABCD4O14678 606 aa10.89□□□□□ -0.67
TPM3-204ENST00000323144 EPHA3P29320 983 aa10.89□□□□□ -0.67
TPM3-204ENST00000323144 S100A3P33764 101 aa10.89□□□□□ -0.67
TPM3-204ENST00000323144 CSNK2A1P68400 391 aaPredicted RBP10.89□□□□□ -0.67
TPM3-204ENST00000323144 SLC25A3Q00325 362 aa10.89□□□□□ -0.67
TPM3-204ENST00000323144 STX3Q13277 289 aa10.89□□□□□ -0.67
TPM3-204ENST00000323144 MAPK11Q15759 364 aa10.89□□□□□ -0.67
TPM3-204ENST00000323144 CLEC12BQ2HXU8 276 aa10.89□□□□□ -0.67
TPM3-204ENST00000323144 DPY19L1Q2PZI1 675 aa10.89□□□□□ -0.67
TPM3-204ENST00000323144 GTDC1Q4AE62 458 aa10.89□□□□□ -0.67
TPM3-204ENST00000323144 MRPL2Q5T653 305 aaKnown RBP10.89□□□□□ -0.67
TPM3-204ENST00000323144 ANXA8L1Q5VT79 327 aa10.89□□□□□ -0.67
TPM3-204ENST00000323144 CASP12Q6UXS9 341 aa10.89□□□□□ -0.67
TPM3-204ENST00000323144 GALNT5Q7Z7M9 940 aa10.89□□□□□ -0.67
TPM3-204ENST00000323144 CCDC103Q8IW40 242 aa10.89□□□□□ -0.67
TPM3-204ENST00000323144 ZNF100Q8IYN0 542 aa10.89□□□□□ -0.67
TPM3-204ENST00000323144 ARFGAP2Q8N6H7 521 aa10.89□□□□□ -0.67
TPM3-204ENST00000323144 ZNF433Q8N7K0 673 aaPredicted RBP10.89□□□□□ -0.67
TPM3-204ENST00000323144 OR52N5Q8NH56 324 aa10.89□□□□□ -0.67
TPM3-204ENST00000323144 MGARPQ8TDB4 240 aa10.89□□□□□ -0.67
TPM3-204ENST00000323144 SMAP2Q8WU79 429 aaPredicted RBP10.89□□□□□ -0.67
TPM3-204ENST00000323144 WDR60Q8WVS4 1066 aa10.89□□□□□ -0.67
TPM3-204ENST00000323144 HSD17B8Q92506 261 aa10.89□□□□□ -0.67
TPM3-204ENST00000323144 PAIP2Q9BPZ3 127 aaKnown RBP10.89□□□□□ -0.67
TPM3-204ENST00000323144 TRAF4Q9BUZ4 470 aaPredicted RBP10.89□□□□□ -0.67
TPM3-204ENST00000323144 HDHD5Q9BXW7 423 aa10.89□□□□□ -0.67
TPM3-204ENST00000323144 WDR55Q9H6Y2 383 aaPredicted RBP10.89□□□□□ -0.67
TPM3-204ENST00000323144 EXOSC3Q9NQT5 275 aaKnown RBP10.89□□□□□ -0.67
TPM3-204ENST00000323144 SERINC1Q9NRX5 453 aa10.89□□□□□ -0.67
TPM3-204ENST00000323144 EMC3Q9P0I2 261 aa10.89□□□□□ -0.67
TPM3-204ENST00000323144 MALT1Q9UDY8 824 aa10.89□□□□□ -0.67
TPM3-204ENST00000323144 BTNL2Q9UIR0 455 aa10.89□□□□□ -0.67
TPM3-204ENST00000323144 PCDHGB4Q9UN71 923 aa10.89□□□□□ -0.67
TPM3-204ENST00000323144 LIPT1Q9Y234 373 aa10.89□□□□□ -0.67
TPM3-204ENST00000323144 SPIN1Q9Y657 262 aaPredicted RBP10.89□□□□□ -0.67
TPM3-204ENST00000323144 TMED7-TICAM2A0A0A6YYA0 188 aa10.88□□□□□ -0.67
TPM3-204ENST00000323144 OR5H1A6NKK0 313 aa10.88□□□□□ -0.67
TPM3-204ENST00000323144 PMS2P2O95744 297 aa10.88□□□□□ -0.67
TPM3-204ENST00000323144 AGR2O95994 175 aa10.88□□□□□ -0.67
TPM3-204ENST00000323144 THBS1P07996 1170 aa10.88□□□□□ -0.67
TPM3-204ENST00000323144 GUSBP08236 651 aa10.88□□□□□ -0.67
TPM3-204ENST00000323144 ITGA5P08648 1049 aa10.88□□□□□ -0.67
TPM3-204ENST00000323144 IMPDH2P12268 514 aa10.88□□□□□ -0.67
TPM3-204ENST00000323144 GGT1P19440 569 aa10.88□□□□□ -0.67
TPM3-204ENST00000323144 IDH2P48735 452 aaKnown RBP10.88□□□□□ -0.67
TPM3-204ENST00000323144 ZNF83P51522 516 aa10.88□□□□□ -0.67
TPM3-204ENST00000323144 WDR4P57081 412 aaKnown RBP10.88□□□□□ -0.67
TPM3-204ENST00000323144 RPS26P11Q5JNZ5 115 aaPredicted RBP10.88□□□□□ -0.67
TPM3-204ENST00000323144 C9orf135Q5VTT2 229 aa10.88□□□□□ -0.67
TPM3-204ENST00000323144 ZNF836Q6ZNA1 936 aa10.88□□□□□ -0.67
TPM3-204ENST00000323144 MAVSQ7Z434 540 aa10.88□□□□□ -0.67
TPM3-204ENST00000323144 UBE2J2Q8N2K1 259 aa10.88□□□□□ -0.67
TPM3-204ENST00000323144 OR52E4Q8NGH9 312 aa10.88□□□□□ -0.67
TPM3-204ENST00000323144 PIGXQ8TBF5 258 aa10.88□□□□□ -0.67
TPM3-204ENST00000323144 GTPBP3Q969Y2 492 aaKnown RBP10.88□□□□□ -0.67
TPM3-204ENST00000323144 APH1AQ96BI3 265 aa10.88□□□□□ -0.67
TPM3-204ENST00000323144 PANX1Q96RD7 426 aa10.88□□□□□ -0.67
TPM3-204ENST00000323144 SLCO5A1Q9H2Y9 848 aa10.88□□□□□ -0.67
TPM3-204ENST00000323144 KCNK9Q9NPC2 374 aa10.88□□□□□ -0.67
TPM3-204ENST00000323144 NGBQ9NPG2 151 aa10.88□□□□□ -0.67
TPM3-204ENST00000323144 OSGIN1Q9UJX0 560 aa10.88□□□□□ -0.67
TPM3-204ENST00000323144 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.88□□□□□ -0.67
TPM3-204ENST00000323144 NOSIPQ9Y314 301 aaKnown RBP10.88□□□□□ -0.67
TPM3-204ENST00000323144 TMED7Q9Y3B3 224 aa10.88□□□□□ -0.67
TPM3-204ENST00000323144 DSPPQ9NZW4 1301 aa10.87□□□□□ -0.67
TPM3-204ENST00000323144 TMEM120BA0PK00 339 aa10.87□□□□□ -0.67
TPM3-204ENST00000323144 CCDC154A6NI56 674 aa10.87□□□□□ -0.67
TPM3-204ENST00000323144 AGAP5A6NIR3 686 aa10.87□□□□□ -0.67
TPM3-204ENST00000323144 TMCC2O75069 709 aa10.87□□□□□ -0.67
TPM3-204ENST00000323144 CD8AP01732 235 aa10.87□□□□□ -0.67
TPM3-204ENST00000323144 PGRP06401 933 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms