RNA–Protein interactions for RNA: ENST00000320516.4

CCDC65-202, Transcript of coiled-coil domain containing 65, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC65, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-202ENST00000320516 HNRNPCL4P0DMR1 293 aa8.83□□□□□ -1
CCDC65-202ENST00000320516 PSMB1P20618 241 aaKnown RBP8.83□□□□□ -1
CCDC65-202ENST00000320516 FKBP2P26885 142 aaKnown RBP8.83□□□□□ -1
CCDC65-202ENST00000320516 LOXP28300 417 aaPredicted RBP8.83□□□□□ -1
CCDC65-202ENST00000320516 SLC1A3P43003 542 aa8.83□□□□□ -1
CCDC65-202ENST00000320516 HTR3AP46098 478 aa8.83□□□□□ -1
CCDC65-202ENST00000320516 CLK1P49759 484 aaKnown RBP8.83□□□□□ -1
CCDC65-202ENST00000320516 LIN52Q52LA3 116 aa8.83□□□□□ -1
CCDC65-202ENST00000320516 RNF220Q5VTB9 566 aa8.83□□□□□ -1
CCDC65-202ENST00000320516 PRAMEF8Q5VWM4 474 aa8.83□□□□□ -1
CCDC65-202ENST00000320516 PRAMEF7Q5VXH5 474 aa8.83□□□□□ -1
CCDC65-202ENST00000320516 PAMR1Q6UXH9 720 aa8.83□□□□□ -1
CCDC65-202ENST00000320516 GABRG1Q8N1C3 465 aa8.83□□□□□ -1
CCDC65-202ENST00000320516 CLIP4Q8N3C7 705 aa8.83□□□□□ -1
CCDC65-202ENST00000320516 MAL2Q969L2 176 aa8.83□□□□□ -1
CCDC65-202ENST00000320516 THOC1Q96FV9 657 aaKnown RBP8.83□□□□□ -1
CCDC65-202ENST00000320516 MED18Q9BUE0 208 aa8.83□□□□□ -1
CCDC65-202ENST00000320516 RSPO3Q9BXY4 272 aaPredicted RBP8.83□□□□□ -1
CCDC65-202ENST00000320516 KLHL4Q9C0H6 718 aa8.83□□□□□ -1
CCDC65-202ENST00000320516 OR11A1Q9GZK7 315 aa8.83□□□□□ -1
CCDC65-202ENST00000320516 ADAM19Q9H013 955 aa8.83□□□□□ -1
CCDC65-202ENST00000320516 CXXC4Q9H2H0 198 aa8.83□□□□□ -1
CCDC65-202ENST00000320516 RAD21L1Q9H4I0 556 aa8.83□□□□□ -1
CCDC65-202ENST00000320516 IKZF5Q9H5V7 419 aa8.83□□□□□ -1
CCDC65-202ENST00000320516 A4GALTQ9NPC4 353 aa8.83□□□□□ -1
CCDC65-202ENST00000320516 CCM2LQ9NUG4 571 aaPredicted RBP8.83□□□□□ -1
CCDC65-202ENST00000320516 ZNF226Q9NYT6 803 aa8.83□□□□□ -1
CCDC65-202ENST00000320516 C6orf203Q9P0P8 240 aaPredicted RBP8.83□□□□□ -1
CCDC65-202ENST00000320516 KLHL9Q9P2J3 617 aa8.83□□□□□ -1
CCDC65-202ENST00000320516 PRDM4Q9UKN5 801 aa8.83□□□□□ -1
CCDC65-202ENST00000320516 ZNF443Q9Y2A4 671 aaPredicted RBP8.83□□□□□ -1
CCDC65-202ENST00000320516 PLEKHA6Q9Y2H5 1048 aa8.83□□□□□ -1
CCDC65-202ENST00000320516 HDGFL3Q9Y3E1 203 aa8.83□□□□□ -1
CCDC65-202ENST00000320516 SPIN1Q9Y657 262 aaPredicted RBP8.83□□□□□ -1
CCDC65-202ENST00000320516 FREM1Q5H8C1 2179 aa8.83□□□□□ -1
CCDC65-202ENST00000320516 A0A1W2PP18 115 aa8.82□□□□□ -1
CCDC65-202ENST00000320516 ZNF724A8MTY0 619 aa8.82□□□□□ -1
CCDC65-202ENST00000320516 SULT2B1O00204 365 aa8.82□□□□□ -1
CCDC65-202ENST00000320516 ZNF208O43345 1280 aa8.82□□□□□ -1
CCDC65-202ENST00000320516 DNPH1O43598 174 aa8.82□□□□□ -1
CCDC65-202ENST00000320516 PMS2P2O95744 297 aa8.82□□□□□ -1
CCDC65-202ENST00000320516 FESP07332 822 aa8.82□□□□□ -1
CCDC65-202ENST00000320516 TACR3P29371 465 aa8.82□□□□□ -1
CCDC65-202ENST00000320516 POLR2HP52434 150 aaKnown RBP8.82□□□□□ -1
CCDC65-202ENST00000320516 ART1P52961 327 aa8.82□□□□□ -1
CCDC65-202ENST00000320516 CSNK2A1P68400 391 aaPredicted RBP8.82□□□□□ -1
CCDC65-202ENST00000320516 H3F3AP84243 136 aa8.82□□□□□ -1
CCDC65-202ENST00000320516 RASGEF1BQ0VAM2 473 aa8.82□□□□□ -1
CCDC65-202ENST00000320516 ZSWIM7Q19AV6 140 aa8.82□□□□□ -1
CCDC65-202ENST00000320516 AGKQ53H12 422 aa8.82□□□□□ -1
CCDC65-202ENST00000320516 ANKRD34AQ69YU3 496 aa8.82□□□□□ -1
CCDC65-202ENST00000320516 ABLIM2Q6H8Q1 611 aa8.82□□□□□ -1
CCDC65-202ENST00000320516 DLEU7Q6UYE1 221 aa8.82□□□□□ -1
CCDC65-202ENST00000320516 MTDHQ86UE4 582 aaKnown RBP8.82□□□□□ -1
CCDC65-202ENST00000320516 STK32CQ86UX6 486 aa8.82□□□□□ -1
CCDC65-202ENST00000320516 ZNF440Q8IYI8 595 aa8.82□□□□□ -1
CCDC65-202ENST00000320516 ZNF300Q96RE9 604 aaPredicted RBP8.82□□□□□ -1
CCDC65-202ENST00000320516 FOXC2Q99958 501 aa8.82□□□□□ -1
CCDC65-202ENST00000320516 SIKE1Q9BRV8 207 aa8.82□□□□□ -1
CCDC65-202ENST00000320516 TACO1Q9BSH4 297 aaKnown RBP8.82□□□□□ -1
CCDC65-202ENST00000320516 OR10A4Q9H209 315 aa8.82□□□□□ -1
CCDC65-202ENST00000320516 DCTN4Q9UJW0 460 aa8.82□□□□□ -1
CCDC65-202ENST00000320516 GPR52Q9Y2T5 361 aa8.82□□□□□ -1
CCDC65-202ENST00000320516 ZNF469Q96JG9 3925 aaPredicted RBP8.82□□□□□ -1
CCDC65-202ENST00000320516 IGKV3D-15A0A087WSY6 115 aa8.81□□□□□ -1
CCDC65-202ENST00000320516 UQCRHLA0A096LP55 91 aa8.81□□□□□ -1
CCDC65-202ENST00000320516 TMED7-TICAM2A0A0A6YYA0 188 aa8.81□□□□□ -1
CCDC65-202ENST00000320516 TMEM72A0PK05 275 aa8.81□□□□□ -1
CCDC65-202ENST00000320516 ZC3H12DA2A288 527 aaKnown RBP8.81□□□□□ -1
CCDC65-202ENST00000320516 ZNF716A6NP11 495 aa8.81□□□□□ -1
CCDC65-202ENST00000320516 ZNF814B7Z6K7 855 aa8.81□□□□□ -1
CCDC65-202ENST00000320516 ATE1O95260 518 aa8.81□□□□□ -1
CCDC65-202ENST00000320516 PGM3O95394 542 aa8.81□□□□□ -1
CCDC65-202ENST00000320516 GKN3PP0CG01 181 aa8.81□□□□□ -1
CCDC65-202ENST00000320516 ARAFP10398 606 aa8.81□□□□□ -1
CCDC65-202ENST00000320516 TFPIP10646 304 aa8.81□□□□□ -1
CCDC65-202ENST00000320516 PRG2P13727 222 aa8.81□□□□□ -1
CCDC65-202ENST00000320516 PPP3CBP16298 524 aa8.81□□□□□ -1
CCDC65-202ENST00000320516 GPX2P18283 190 aa8.81□□□□□ -1
CCDC65-202ENST00000320516 EDNRAP25101 427 aa8.81□□□□□ -1
CCDC65-202ENST00000320516 OR3A2P47893 321 aa8.81□□□□□ -1
CCDC65-202ENST00000320516 MAP2K6P52564 334 aa8.81□□□□□ -1
CCDC65-202ENST00000320516 LARS2Q15031 903 aaKnown RBP8.81□□□□□ -1
CCDC65-202ENST00000320516 PDK3Q15120 406 aa8.81□□□□□ -1
CCDC65-202ENST00000320516 FBXW10Q5XX13 1052 aa8.81□□□□□ -1
CCDC65-202ENST00000320516 MBD6Q96DN6 1003 aa8.81□□□□□ -1
CCDC65-202ENST00000320516 ZC3HAV1LQ96H79 300 aaKnown RBP8.81□□□□□ -1
CCDC65-202ENST00000320516 SPATA9Q9BWV2 254 aa8.81□□□□□ -1
CCDC65-202ENST00000320516 RABEP2Q9H5N1 569 aa8.81□□□□□ -1
CCDC65-202ENST00000320516 NPHS2Q9NP85 383 aa8.81□□□□□ -1
CCDC65-202ENST00000320516 FANCFQ9NPI8 374 aa8.81□□□□□ -1
CCDC65-202ENST00000320516 TRAPPC4Q9Y296 219 aa8.81□□□□□ -1
CCDC65-202ENST00000320516 IFT52Q9Y366 437 aa8.81□□□□□ -1
CCDC65-202ENST00000320516 TMED7Q9Y3B3 224 aa8.81□□□□□ -1
CCDC65-202ENST00000320516 PRRC2AP48634 2157 aaKnown RBP8.81□□□□□ -1
CCDC65-202ENST00000320516 PRR14LQ5THK1 2151 aa8.81□□□□□ -1
CCDC65-202ENST00000320516 TMEM247A6NEH6 219 aa8.81□□□□□ -1
CCDC65-202ENST00000320516 KLF4O43474 513 aa8.81□□□□□ -1
CCDC65-202ENST00000320516 RAMP1O60894 148 aa8.81□□□□□ -1
CCDC65-202ENST00000320516 RAF1P04049 648 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms