RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 TMEM72A0PK05 275 aa13.93□□□□□ -0.18
PDLIM5-202ENST00000318007 EI24O14681 340 aa13.93□□□□□ -0.18
PDLIM5-202ENST00000318007 SUSD5O60279 629 aa13.93□□□□□ -0.18
PDLIM5-202ENST00000318007 ZIC3O60481 467 aa13.93□□□□□ -0.18
PDLIM5-202ENST00000318007 LYPD3O95274 346 aa13.93□□□□□ -0.18
PDLIM5-202ENST00000318007 DNAJA1P31689 397 aaKnown RBP13.93□□□□□ -0.18
PDLIM5-202ENST00000318007 RPS5P46782 204 aaKnown RBP13.93□□□□□ -0.18
PDLIM5-202ENST00000318007 STARP49675 285 aa13.93□□□□□ -0.18
PDLIM5-202ENST00000318007 CRYZQ08257 329 aaKnown RBP13.93□□□□□ -0.18
PDLIM5-202ENST00000318007 Q6ZS92 163 aa13.93□□□□□ -0.18
PDLIM5-202ENST00000318007 GRINAQ7Z429 371 aa13.93□□□□□ -0.18
PDLIM5-202ENST00000318007 GALNT5Q7Z7M9 940 aa13.93□□□□□ -0.18
PDLIM5-202ENST00000318007 ATG4DQ86TL0 474 aaPredicted RBP13.93□□□□□ -0.18
PDLIM5-202ENST00000318007 CBR4Q8N4T8 237 aa13.93□□□□□ -0.18
PDLIM5-202ENST00000318007 OR4K5Q8NGD3 323 aa13.93□□□□□ -0.18
PDLIM5-202ENST00000318007 TMEM239Q8WW34 195 aa13.93□□□□□ -0.18
PDLIM5-202ENST00000318007 SLC38A4Q969I6 547 aa13.93□□□□□ -0.18
PDLIM5-202ENST00000318007 TACO1Q9BSH4 297 aaKnown RBP13.93□□□□□ -0.18
PDLIM5-202ENST00000318007 KIF17Q9P2E2 1029 aa13.93□□□□□ -0.18
PDLIM5-202ENST00000318007 TMED7Q9Y3B3 224 aa13.93□□□□□ -0.18
PDLIM5-202ENST00000318007 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 A0A1W2PRQ8 180 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 OR2M5A3KFT3 312 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 SEC14L5O43304 696 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 EFNA2O43921 213 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 DPM1O60762 260 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 TFPIP10646 304 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 SHC1P29353 583 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 PTDSS1P48651 473 aaKnown RBP13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 POLR2HP52434 150 aaKnown RBP13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 ARHGDIAP52565 204 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 SUMO3P55854 103 aaPredicted RBP13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 HSF1Q00613 529 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 DGCR6Q14129 220 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 GXYLT1Q4G148 440 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 ADGRG3Q86Y34 549 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 C10orf53Q8N6V4 93 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 ATG16L2Q8NAA4 619 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 ZFP62Q8NB50 900 aaPredicted RBP13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 AQP11Q8NBQ7 271 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 FAM98AQ8NCA5 519 aaKnown RBP13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 OR10G2Q8NGC3 310 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 OR4C15Q8NGM1 316 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 MAGEE2Q8TD90 523 aaPredicted RBP13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 DNAJA4Q8WW22 397 aaPredicted RBP13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 SLC35B4Q969S0 331 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 SDCCAG3Q96C92 435 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 ARL5BQ96KC2 179 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 SFXN2Q96NB2 322 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 SLC29A1Q99808 456 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 LDAHQ9H6V9 325 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 EXO5Q9H790 373 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 COQ10BQ9H8M1 238 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 MEPEQ9NQ76 525 aaPredicted RBP13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 STOML1Q9UBI4 398 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 ZNF337Q9Y3M9 751 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 MPDZO75970 2070 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 EPG5Q9HCE0 2579 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 ACOT7O00154 380 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 CCNB2O95067 398 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 FPR1P21462 350 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 PPP4R4Q6NUP7 873 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 TTC33Q6PID6 262 aaPredicted RBP13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 PRICKLE2Q7Z3G6 844 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 SLC22A16Q86VW1 577 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 NTNG2Q96CW9 530 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 KTI12Q96EK9 354 aaPredicted RBP13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 FEVQ99581 238 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 EPYCQ99645 322 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 NIPSNAP1Q9BPW8 284 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 ADAM19Q9H013 955 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 CHRNA9Q9UGM1 479 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 ZNF407Q9C0G0 2248 aa13.92□□□□□ -0.18
PDLIM5-202ENST00000318007 IGKV1D-42A0A075B6H8 117 aa13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 A0A087WUJ7 227 aa13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 A0A1W2PNR3 127 aa13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 SH3PXD2BA1X283 911 aa13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 GASTP01350 101 aa13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 SRD5A2P31213 254 aa13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 LIMS1P48059 325 aa13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 SRYQ05066 204 aa13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 EGR4Q05215 589 aa13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 SNCBQ16143 134 aa13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 C3AR1Q16581 482 aa13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 MICAQ29983 383 aa13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 PRR30Q53SZ7 412 aaPredicted RBP13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 SHQ1Q6PI26 577 aaKnown RBP13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 PLXDC2Q6UX71 529 aa13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 ZBTB49Q6ZSB9 765 aa13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 OR5K1Q8NHB7 308 aa13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 GIPC3Q8TF64 312 aa13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 ST8SIA1Q92185 356 aa13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 SLC25A36Q96CQ1 311 aa13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 GPA33Q99795 319 aa13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 IL20RAQ9UHF4 553 aa13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 ENO4A6NNW6 628 aa13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 NPIPA5E9PKD4 350 aa13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 MITFO75030 526 aaPredicted RBP13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 GLSO94925 669 aaPredicted RBP13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 SOX14O95416 240 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms