RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 RAB31Q13636 194 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 GANABQ14697 944 aaKnown RBP4.23□□□□□ -1.73
CNOT1-201ENST00000317147 UPP1Q16831 310 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 ZNF674Q2M3X9 581 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 OR4F3Q6IEY1 312 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 RNF111Q6ZNA4 994 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 TMED4Q7Z7H5 227 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 RNF180Q86T96 592 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 THAP4Q8WY91 577 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 GPR137Q96N19 417 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 TGM7Q96PF1 710 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 GPR20Q99678 358 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 BARD1Q99728 777 aaKnown RBP4.23□□□□□ -1.73
CNOT1-201ENST00000317147 ZCCHC4Q9H5U6 513 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 NARFLQ9H6Q4 476 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 SRA1Q9HD15 236 aaKnown RBP4.23□□□□□ -1.73
CNOT1-201ENST00000317147 FGF20Q9NP95 211 aaPredicted RBP4.23□□□□□ -1.73
CNOT1-201ENST00000317147 EXOSC3Q9NQT5 275 aaKnown RBP4.23□□□□□ -1.73
CNOT1-201ENST00000317147 PHPT1Q9NRX4 125 aaPredicted RBP4.23□□□□□ -1.73
CNOT1-201ENST00000317147 ARL5AQ9Y689 179 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 JMJD1CQ15652 2540 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 SH3BGRLO75368 114 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 SIX3O95343 332 aaPredicted RBP4.23□□□□□ -1.73
CNOT1-201ENST00000317147 RAB3DO95716 219 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 PTHLHP12272 177 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 BDNFP23560 247 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 GGT5P36269 586 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 ARL4DP49703 201 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 IDH3GP51553 393 aaPredicted RBP4.23□□□□□ -1.73
CNOT1-201ENST00000317147 TAS2R30P59541 319 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 HERV-K104P61576 105 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 SCGB2B2Q4G0G5 96 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 TMEM201Q5SNT2 666 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 PRAMEF14Q5SWL7 426 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 AGBL4Q5VU57 503 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 VRK3Q8IV63 474 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 FAM185AQ8N0U4 392 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 STEAP2Q8NFT2 490 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 MTHFD2LQ9H903 347 aaPredicted RBP4.23□□□□□ -1.73
CNOT1-201ENST00000317147 PDLIM7Q9NR12 457 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.23□□□□□ -1.73
CNOT1-201ENST00000317147 PRODH2Q9UF12 536 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 MUTYHQ9UIF7 546 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 V9GY05 133 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 ELOA3DA6NLF2 546 aaPredicted RBP4.23□□□□□ -1.73
CNOT1-201ENST00000317147 LEUTXA8MZ59 168 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 CCL22O00626 93 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 TPST2O60704 377 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 BCHEP06276 602 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 MMP3P08254 477 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 SLC2A1P11166 492 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 ZNF35P13682 527 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 ATP1B2P14415 290 aaPredicted RBP4.23□□□□□ -1.73
CNOT1-201ENST00000317147 BDKRB2P30411 391 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 S100A7P31151 101 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 LIPAP38571 399 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 ALDH3B1P43353 468 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 HBA1P69905 142 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 POU6F2P78424 691 aaPredicted RBP4.23□□□□□ -1.73
CNOT1-201ENST00000317147 DSC2Q02487 901 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 SCGB2A2Q13296 93 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 SOWAHAQ2M3V2 549 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 CTU2Q2VPK5 515 aaKnown RBP4.23□□□□□ -1.73
CNOT1-201ENST00000317147 SLC10A6Q3KNW5 377 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 ELOA3BQ3SY89 546 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 LEXMQ3ZCV2 418 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 DPPA3Q6W0C5 159 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 MRPL41Q8IXM3 137 aaKnown RBP4.23□□□□□ -1.73
CNOT1-201ENST00000317147 WDTC1Q8N5D0 677 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 LMNTD1Q8N9Z9 388 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 ELOA3Q8NG57 546 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 OR6K6Q8NGW6 343 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 ORAI1Q96D31 301 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 BEX2Q9BXY8 128 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 ENKD1Q9H0I2 346 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 GALPQ9UBC7 116 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 DNAJB11Q9UBS4 358 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 PURGQ9UJV8 347 aaKnown RBP4.23□□□□□ -1.73
CNOT1-201ENST00000317147 NDRG2Q9UN36 371 aaKnown RBP4.23□□□□□ -1.73
CNOT1-201ENST00000317147 PTGDR2Q9Y5Y4 395 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 ARL5CA6NH57 179 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 E5RGE8 158 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 TMX2-CTNND1H3BSU7 103 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 GTPBP1O00178 669 aaKnown RBP4.23□□□□□ -1.73
CNOT1-201ENST00000317147 GPR37L1O60883 481 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 DIRAS3O95661 229 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 ARAFP10398 606 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 PCMT1P22061 227 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 PYCR1P32322 319 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 ZNF133P52736 654 aaPredicted RBP4.23□□□□□ -1.73
CNOT1-201ENST00000317147 CDK5Q00535 292 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 TLE2Q04725 743 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 ENPP2Q13822 863 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 DECR1Q16698 335 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 ZNF585AQ6P3V2 769 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 TMEM65Q6PI78 240 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 AGTRAPQ6RW13 159 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 SLC16A9Q7RTY1 509 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 S100A7AQ86SG5 101 aa4.23□□□□□ -1.73
CNOT1-201ENST00000317147 TAC4Q86UU9 113 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms