RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 TAB1Q15750 504 aa13.79□□□□□ -0.2
FOXR1-201ENST00000317011 NCMAPQ5T1S8 102 aa13.79□□□□□ -0.2
FOXR1-201ENST00000317011 ATAD3BQ5T9A4 648 aa13.79□□□□□ -0.2
FOXR1-201ENST00000317011 Q6ZT83 130 aa13.79□□□□□ -0.2
FOXR1-201ENST00000317011 C16orf62Q7Z3J2 963 aa13.79□□□□□ -0.2
FOXR1-201ENST00000317011 SPATA19Q7Z5L4 167 aa13.79□□□□□ -0.2
FOXR1-201ENST00000317011 MTDHQ86UE4 582 aaKnown RBP13.79□□□□□ -0.2
FOXR1-201ENST00000317011 ADGRG3Q86Y34 549 aa13.79□□□□□ -0.2
FOXR1-201ENST00000317011 ZNF619Q8N2I2 560 aa13.79□□□□□ -0.2
FOXR1-201ENST00000317011 PMM1Q92871 262 aa13.79□□□□□ -0.2
FOXR1-201ENST00000317011 SERINC1Q9NRX5 453 aa13.79□□□□□ -0.2
FOXR1-201ENST00000317011 AIG1Q9NVV5 245 aa13.79□□□□□ -0.2
FOXR1-201ENST00000317011 CSPG4Q6UVK1 2322 aa13.79□□□□□ -0.2
FOXR1-201ENST00000317011 IGHV3-15A0A0B4J1V0 119 aa13.78□□□□□ -0.2
FOXR1-201ENST00000317011 OVOL3O00110 214 aa13.78□□□□□ -0.2
FOXR1-201ENST00000317011 UBDO15205 165 aa13.78□□□□□ -0.2
FOXR1-201ENST00000317011 PGM3O95394 542 aa13.78□□□□□ -0.2
FOXR1-201ENST00000317011 UBTFL6P0CB48 400 aaPredicted RBP13.78□□□□□ -0.2
FOXR1-201ENST00000317011 EDNRAP25101 427 aa13.78□□□□□ -0.2
FOXR1-201ENST00000317011 SLC7A1P30825 629 aa13.78□□□□□ -0.2
FOXR1-201ENST00000317011 S100A3P33764 101 aa13.78□□□□□ -0.2
FOXR1-201ENST00000317011 PTH2RP49190 550 aa13.78□□□□□ -0.2
FOXR1-201ENST00000317011 DIO1P49895 249 aa13.78□□□□□ -0.2
FOXR1-201ENST00000317011 CBX1P83916 185 aa13.78□□□□□ -0.2
FOXR1-201ENST00000317011 H3F3AP84243 136 aa13.78□□□□□ -0.2
FOXR1-201ENST00000317011 CHRNEQ04844 493 aa13.78□□□□□ -0.2
FOXR1-201ENST00000317011 CAPRIN1Q14444 709 aaKnown RBP13.78□□□□□ -0.2
FOXR1-201ENST00000317011 TSC22D1Q15714 1073 aa13.78□□□□□ -0.2
FOXR1-201ENST00000317011 FAM174BQ3ZCQ3 159 aa13.78□□□□□ -0.2
FOXR1-201ENST00000317011 TNFAIP8L2Q6P589 184 aaPredicted RBP13.78□□□□□ -0.2
FOXR1-201ENST00000317011 YTHDF3Q7Z739 585 aaKnown RBP13.78□□□□□ -0.2
FOXR1-201ENST00000317011 WFDC8Q8IUA0 241 aa13.78□□□□□ -0.2
FOXR1-201ENST00000317011 SLC25A43Q8WUT9 341 aaPredicted RBP13.78□□□□□ -0.2
FOXR1-201ENST00000317011 STON2Q8WXE9 905 aa13.78□□□□□ -0.2
FOXR1-201ENST00000317011 TRNT1Q96Q11 434 aaKnown RBP13.78□□□□□ -0.2
FOXR1-201ENST00000317011 SLC35A5Q9BS91 424 aa13.78□□□□□ -0.2
FOXR1-201ENST00000317011 BDH2Q9BUT1 245 aa13.78□□□□□ -0.2
FOXR1-201ENST00000317011 SLC38A1Q9H2H9 487 aa13.78□□□□□ -0.2
FOXR1-201ENST00000317011 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.78□□□□□ -0.2
FOXR1-201ENST00000317011 PRDM4Q9UKN5 801 aa13.78□□□□□ -0.2
FOXR1-201ENST00000317011 LIPT1Q9Y234 373 aa13.78□□□□□ -0.2
FOXR1-201ENST00000317011 FN1P02751 2386 aaKnown RBP13.78□□□□□ -0.2
FOXR1-201ENST00000317011 CCDC154A6NI56 674 aa13.77□□□□□ -0.21
FOXR1-201ENST00000317011 AGAP5A6NIR3 686 aa13.77□□□□□ -0.21
FOXR1-201ENST00000317011 FAM171A2A8MVW0 826 aa13.77□□□□□ -0.21
FOXR1-201ENST00000317011 PMS2P2O95744 297 aa13.77□□□□□ -0.21
FOXR1-201ENST00000317011 PGRP06401 933 aa13.77□□□□□ -0.21
FOXR1-201ENST00000317011 HEXAP06865 529 aa13.77□□□□□ -0.21
FOXR1-201ENST00000317011 THBS1P07996 1170 aa13.77□□□□□ -0.21
FOXR1-201ENST00000317011 DANCRP0C864 163 aa13.77□□□□□ -0.21
FOXR1-201ENST00000317011 NCF2P19878 526 aaPredicted RBP13.77□□□□□ -0.21
FOXR1-201ENST00000317011 CADP27708 2225 aa13.77□□□□□ -0.21
FOXR1-201ENST00000317011 ADSLP30566 484 aaPredicted RBP13.77□□□□□ -0.21
FOXR1-201ENST00000317011 NTF4P34130 210 aa13.77□□□□□ -0.21
FOXR1-201ENST00000317011 CCR4P51679 360 aa13.77□□□□□ -0.21
FOXR1-201ENST00000317011 NME5P56597 212 aa13.77□□□□□ -0.21
FOXR1-201ENST00000317011 LRRC74AQ0VAA2 488 aa13.77□□□□□ -0.21
FOXR1-201ENST00000317011 MERTKQ12866 999 aa13.77□□□□□ -0.21
FOXR1-201ENST00000317011 MAPK11Q15759 364 aa13.77□□□□□ -0.21
FOXR1-201ENST00000317011 SYT14P1Q58G82 188 aa13.77□□□□□ -0.21
FOXR1-201ENST00000317011 CLEC9AQ6UXN8 241 aa13.77□□□□□ -0.21
FOXR1-201ENST00000317011 LRRC74BQ6ZQY2 392 aa13.77□□□□□ -0.21
FOXR1-201ENST00000317011 GRINAQ7Z429 371 aa13.77□□□□□ -0.21
FOXR1-201ENST00000317011 PIGWQ7Z7B1 504 aa13.77□□□□□ -0.21
FOXR1-201ENST00000317011 CMIPQ8IY22 773 aa13.77□□□□□ -0.21
FOXR1-201ENST00000317011 TMCO5AQ8N6Q1 288 aa13.77□□□□□ -0.21
FOXR1-201ENST00000317011 AKAP1Q92667 903 aaKnown RBP eCLIP13.77□□□□□ -0.21
FOXR1-201ENST00000317011 KISS1RQ969F8 398 aaPredicted RBP13.77□□□□□ -0.21
FOXR1-201ENST00000317011 Q96MF0 132 aa13.77□□□□□ -0.21
FOXR1-201ENST00000317011 OR5B2Q96R09 309 aa13.77□□□□□ -0.21
FOXR1-201ENST00000317011 ZNF300Q96RE9 604 aaPredicted RBP13.77□□□□□ -0.21
FOXR1-201ENST00000317011 ABCA2Q9BZC7 2435 aa13.77□□□□□ -0.21
FOXR1-201ENST00000317011 MTHFD2LQ9H903 347 aaPredicted RBP13.77□□□□□ -0.21
FOXR1-201ENST00000317011 CTPS2Q9NRF8 586 aa13.77□□□□□ -0.21
FOXR1-201ENST00000317011 PRSS50Q9UI38 385 aa13.77□□□□□ -0.21
FOXR1-201ENST00000317011 TRAPPC4Q9Y296 219 aa13.77□□□□□ -0.21
FOXR1-201ENST00000317011 HDGFL3Q9Y3E1 203 aa13.77□□□□□ -0.21
FOXR1-201ENST00000317011 NSD1Q96L73 2696 aaPredicted RBP13.77□□□□□ -0.21
FOXR1-201ENST00000317011 ANK3Q12955 4377 aaKnown RBP13.76□□□□□ -0.21
FOXR1-201ENST00000317011 DPRXA6NFQ7 191 aa13.76□□□□□ -0.21
FOXR1-201ENST00000317011 CLDN24A6NM45 220 aa13.76□□□□□ -0.21
FOXR1-201ENST00000317011 ZNF716A6NP11 495 aa13.76□□□□□ -0.21
FOXR1-201ENST00000317011 C9JVG2 144 aa13.76□□□□□ -0.21
FOXR1-201ENST00000317011 SULT2B1O00204 365 aa13.76□□□□□ -0.21
FOXR1-201ENST00000317011 FAAHO00519 579 aa13.76□□□□□ -0.21
FOXR1-201ENST00000317011 NDUFAB1O14561 156 aa13.76□□□□□ -0.21
FOXR1-201ENST00000317011 DNPH1O43598 174 aa13.76□□□□□ -0.21
FOXR1-201ENST00000317011 CYP7B1O75881 506 aa13.76□□□□□ -0.21
FOXR1-201ENST00000317011 LY6G6DO95868 133 aa13.76□□□□□ -0.21
FOXR1-201ENST00000317011 COX5AP20674 150 aa13.76□□□□□ -0.21
FOXR1-201ENST00000317011 RPS4Y1P22090 263 aaKnown RBP13.76□□□□□ -0.21
FOXR1-201ENST00000317011 CDKN2CP42773 168 aa13.76□□□□□ -0.21
FOXR1-201ENST00000317011 MAGEA8P43361 318 aa13.76□□□□□ -0.21
FOXR1-201ENST00000317011 KHKP50053 298 aa13.76□□□□□ -0.21
FOXR1-201ENST00000317011 MVDP53602 400 aa13.76□□□□□ -0.21
FOXR1-201ENST00000317011 SLC16A1P53985 500 aa13.76□□□□□ -0.21
FOXR1-201ENST00000317011 CSNK2A1P68400 391 aaPredicted RBP13.76□□□□□ -0.21
FOXR1-201ENST00000317011 SYPL1Q16563 259 aa13.76□□□□□ -0.21
FOXR1-201ENST00000317011 GKAP1Q5VSY0 366 aaPredicted RBP13.76□□□□□ -0.21
FOXR1-201ENST00000317011 ABLIM2Q6H8Q1 611 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms