RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 NLRC3Q7RTR2 1065 aa12.79□□□□□ -0.36
MKS1-201ENST00000313863 FTMTQ8N4E7 242 aa12.79□□□□□ -0.36
MKS1-201ENST00000313863 SPICQ8N5J4 248 aa12.79□□□□□ -0.36
MKS1-201ENST00000313863 MYADMQ96S97 322 aa12.79□□□□□ -0.36
MKS1-201ENST00000313863 C6orf106Q9H6K1 298 aaPredicted RBP12.79□□□□□ -0.36
MKS1-201ENST00000313863 GPN1Q9HCN4 374 aaPredicted RBP12.79□□□□□ -0.36
MKS1-201ENST00000313863 MBNL1Q9NR56 388 aaKnown RBP12.79□□□□□ -0.36
MKS1-201ENST00000313863 ZNF224Q9NZL3 707 aa12.79□□□□□ -0.36
MKS1-201ENST00000313863 KLHL9Q9P2J3 617 aa12.79□□□□□ -0.36
MKS1-201ENST00000313863 PCDHGA9Q9Y5G4 932 aaKnown RBP12.79□□□□□ -0.36
MKS1-201ENST00000313863 BET1O15155 118 aa12.78□□□□□ -0.36
MKS1-201ENST00000313863 KRT33AO76009 404 aa12.78□□□□□ -0.36
MKS1-201ENST00000313863 MPC2O95563 127 aa12.78□□□□□ -0.36
MKS1-201ENST00000313863 NAGAP17050 411 aa12.78□□□□□ -0.36
MKS1-201ENST00000313863 PEBP1P30086 187 aaKnown RBP12.78□□□□□ -0.36
MKS1-201ENST00000313863 DHODHQ02127 395 aa12.78□□□□□ -0.36
MKS1-201ENST00000313863 LINGO2Q7L985 606 aa12.78□□□□□ -0.36
MKS1-201ENST00000313863 LGALS14Q8TCE9 139 aa12.78□□□□□ -0.36
MKS1-201ENST00000313863 SNX33Q8WV41 574 aa12.78□□□□□ -0.36
MKS1-201ENST00000313863 SLC22A18Q96BI1 424 aa12.78□□□□□ -0.36
MKS1-201ENST00000313863 MSANTD3Q96H12 275 aa12.78□□□□□ -0.36
MKS1-201ENST00000313863 RBP7Q96R05 134 aa12.78□□□□□ -0.36
MKS1-201ENST00000313863 METTL17Q9H7H0 456 aaPredicted RBP12.78□□□□□ -0.36
MKS1-201ENST00000313863 SPHK1Q9NYA1 384 aa12.78□□□□□ -0.36
MKS1-201ENST00000313863 DPP7Q9UHL4 492 aa12.78□□□□□ -0.36
MKS1-201ENST00000313863 SERTAD3Q9UJW9 196 aa12.78□□□□□ -0.36
MKS1-201ENST00000313863 SESN1Q9Y6P5 492 aa12.78□□□□□ -0.36
MKS1-201ENST00000313863 SPACA6W5XKT8 324 aa12.78□□□□□ -0.36
MKS1-201ENST00000313863 TRAV27A0A087WT01 109 aa12.77□□□□□ -0.36
MKS1-201ENST00000313863 TRBV2A0A0J9YWF9 115 aa12.77□□□□□ -0.36
MKS1-201ENST00000313863 PRR19A6NJB7 356 aa12.77□□□□□ -0.36
MKS1-201ENST00000313863 OR52A4PA6NMU1 304 aa12.77□□□□□ -0.36
MKS1-201ENST00000313863 TPPPO94811 219 aa12.77□□□□□ -0.36
MKS1-201ENST00000313863 POU2F2P09086 479 aa12.77□□□□□ -0.36
MKS1-201ENST00000313863 ANKRD34CP0C6C1 535 aa12.77□□□□□ -0.36
MKS1-201ENST00000313863 CPN1P15169 458 aa12.77□□□□□ -0.36
MKS1-201ENST00000313863 IL9P15248 144 aa12.77□□□□□ -0.36
MKS1-201ENST00000313863 CTRB1P17538 263 aa12.77□□□□□ -0.36
MKS1-201ENST00000313863 DRD3P35462 400 aa12.77□□□□□ -0.36
MKS1-201ENST00000313863 TSPAN5P62079 268 aa12.77□□□□□ -0.36
MKS1-201ENST00000313863 TP53I3Q53FA7 332 aa12.77□□□□□ -0.36
MKS1-201ENST00000313863 EXOSC6Q5RKV6 272 aaKnown RBP12.77□□□□□ -0.36
MKS1-201ENST00000313863 AGBL4Q5VU57 503 aa12.77□□□□□ -0.36
MKS1-201ENST00000313863 CTRB2Q6GPI1 263 aa12.77□□□□□ -0.36
MKS1-201ENST00000313863 UNQ9370/PRO34162Q6UXP9 181 aa12.77□□□□□ -0.36
MKS1-201ENST00000313863 NUDT18Q6ZVK8 323 aa12.77□□□□□ -0.36
MKS1-201ENST00000313863 SLC35F2Q8IXU6 374 aa12.77□□□□□ -0.36
MKS1-201ENST00000313863 ESX1Q8N693 406 aa12.77□□□□□ -0.36
MKS1-201ENST00000313863 KCT2Q8NC54 265 aa12.77□□□□□ -0.36
MKS1-201ENST00000313863 OR51A7Q8NH64 312 aa12.77□□□□□ -0.36
MKS1-201ENST00000313863 CEP76Q8TAP6 659 aa12.77□□□□□ -0.36
MKS1-201ENST00000313863 FCAMRQ8WWV6 532 aa12.77□□□□□ -0.36
MKS1-201ENST00000313863 CAPNS2Q96L46 248 aa12.77□□□□□ -0.36
MKS1-201ENST00000313863 TRIM2Q9C040 744 aa12.77□□□□□ -0.36
MKS1-201ENST00000313863 HRASLSQ9HDD0 168 aa12.77□□□□□ -0.36
MKS1-201ENST00000313863 KCMF1Q9P0J7 381 aa12.77□□□□□ -0.36
MKS1-201ENST00000313863 THAP10Q9P2Z0 257 aaPredicted RBP12.77□□□□□ -0.36
MKS1-201ENST00000313863 POMT2Q9UKY4 750 aa12.77□□□□□ -0.36
MKS1-201ENST00000313863 SLC17A4Q9Y2C5 497 aa12.77□□□□□ -0.36
MKS1-201ENST00000313863 A0A1W2PPL8 197 aa12.77□□□□□ -0.37
MKS1-201ENST00000313863 RFXAPO00287 272 aa12.77□□□□□ -0.37
MKS1-201ENST00000313863 FKTNO75072 461 aa12.77□□□□□ -0.37
MKS1-201ENST00000313863 ADH1BP00325 375 aa12.77□□□□□ -0.37
MKS1-201ENST00000313863 GIPP09681 153 aaPredicted RBP12.77□□□□□ -0.37
MKS1-201ENST00000313863 RAB40ALP0C0E4 278 aa12.77□□□□□ -0.37
MKS1-201ENST00000313863 CSF2RAP15509 400 aa12.77□□□□□ -0.37
MKS1-201ENST00000313863 EDNRAP25101 427 aa12.77□□□□□ -0.37
MKS1-201ENST00000313863 SSTR2P30874 369 aa12.77□□□□□ -0.37
MKS1-201ENST00000313863 VSX2P58304 361 aaPredicted RBP12.77□□□□□ -0.37
MKS1-201ENST00000313863 ZP1P60852 638 aa12.77□□□□□ -0.37
MKS1-201ENST00000313863 RAP2BP61225 183 aa12.77□□□□□ -0.37
MKS1-201ENST00000313863 POU6F2P78424 691 aaPredicted RBP12.77□□□□□ -0.37
MKS1-201ENST00000313863 HTRA4P83105 476 aaPredicted RBP12.77□□□□□ -0.37
MKS1-201ENST00000313863 SGCGQ13326 291 aa12.77□□□□□ -0.37
MKS1-201ENST00000313863 MFSD13AQ14CX5 517 aa12.77□□□□□ -0.37
MKS1-201ENST00000313863 PDGFRLQ15198 375 aa12.77□□□□□ -0.37
MKS1-201ENST00000313863 GAB4Q2WGN9 574 aa12.77□□□□□ -0.37
MKS1-201ENST00000313863 FHL5Q5TD97 284 aa12.77□□□□□ -0.37
MKS1-201ENST00000313863 SEZ6L2Q6UXD5 910 aa12.77□□□□□ -0.37
MKS1-201ENST00000313863 VN1R4Q7Z5H5 301 aa12.77□□□□□ -0.37
MKS1-201ENST00000313863 CMTM4Q8IZR5 234 aa12.77□□□□□ -0.37
MKS1-201ENST00000313863 CYB561A3Q8NBI2 242 aa12.77□□□□□ -0.37
MKS1-201ENST00000313863 BEST4Q8NFU0 473 aa12.77□□□□□ -0.37
MKS1-201ENST00000313863 OR4D9Q8NGE8 314 aa12.77□□□□□ -0.37
MKS1-201ENST00000313863 OR13C5Q8NGS8 318 aa12.77□□□□□ -0.37
MKS1-201ENST00000313863 LCN9Q8WX39 176 aa12.77□□□□□ -0.37
MKS1-201ENST00000313863 RAB40AQ8WXH6 277 aa12.77□□□□□ -0.37
MKS1-201ENST00000313863 RBPMSQ93062 196 aaKnown RBP12.77□□□□□ -0.37
MKS1-201ENST00000313863 PELI1Q96FA3 418 aa12.77□□□□□ -0.37
MKS1-201ENST00000313863 CCDC120Q96HB5 630 aa12.77□□□□□ -0.37
MKS1-201ENST00000313863 C1QTNF7Q9BXJ2 289 aa12.77□□□□□ -0.37
MKS1-201ENST00000313863 NKIRAS2Q9NYR9 191 aa12.77□□□□□ -0.37
MKS1-201ENST00000313863 FBXL3Q9UKT7 428 aa12.77□□□□□ -0.37
MKS1-201ENST00000313863 AK6Q9Y3D8 172 aaKnown RBP12.77□□□□□ -0.37
MKS1-201ENST00000313863 A0A0B4J2E0 115 aa12.76□□□□□ -0.37
MKS1-201ENST00000313863 CENPVL1A0A0U1RR11 272 aa12.76□□□□□ -0.37
MKS1-201ENST00000313863 A0A1B0GX12 115 aa12.76□□□□□ -0.37
MKS1-201ENST00000313863 GXYLT2A0PJZ3 443 aa12.76□□□□□ -0.37
MKS1-201ENST00000313863 AIPO00170 330 aa12.76□□□□□ -0.37
MKS1-201ENST00000313863 KHDRBS3O75525 346 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms